Wall clock time and date at job start Tue Mar 31 2020 05:07:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.38545 * 119.94822 * 2 1 4 4 N 1.33523 * 133.88155 * 359.97438 * 3 2 1 5 5 C 1.30990 * 109.82967 * 179.97438 * 4 3 2 6 6 Br 1.89095 * 125.16192 * 180.02562 * 5 4 3 7 7 N 1.34824 * 109.68094 * 359.97438 * 5 4 3 8 8 C 1.46502 * 126.51835 * 179.74044 * 7 5 4 9 9 C 1.50701 * 109.47298 * 90.02333 * 8 7 5 10 10 H 1.07999 * 120.00022 * 359.97438 * 9 8 7 11 11 C 1.37875 * 120.00008 * 179.97438 * 9 8 7 12 12 N 1.31511 * 120.00039 * 0.02562 * 11 9 8 13 13 Si 1.86799 * 119.99941 * 179.97438 * 11 9 8 14 14 H 1.48497 * 109.47106 * 0.02562 * 13 11 9 15 15 H 1.48496 * 109.47100 * 120.00313 * 13 11 9 16 16 H 1.48499 * 109.47223 * 240.00373 * 13 11 9 17 17 C 1.38177 * 106.96296 * 359.97438 * 7 5 4 18 18 C 1.41066 * 134.57226 * 180.02562 * 17 7 5 19 19 O 1.21805 * 120.38531 * 359.97438 * 18 17 7 20 20 N 1.34935 * 119.23694 * 180.02562 * 18 17 7 21 21 C 1.46491 * 119.50545 * 179.97438 * 20 18 17 22 22 C 1.34418 * 120.98905 * 359.97438 * 20 18 17 23 23 O 1.21596 * 119.17165 * 179.97438 * 22 20 18 24 24 H 1.08994 * 109.47381 * 90.00428 * 1 2 3 25 25 H 1.09003 * 109.46624 * 210.00061 * 1 2 3 26 26 H 1.08993 * 109.47132 * 329.99768 * 1 2 3 27 27 H 1.08998 * 109.46867 * 210.02065 * 8 7 5 28 28 H 1.08998 * 109.47096 * 330.01854 * 8 7 5 29 29 H 0.97002 * 120.00151 * 180.02562 * 12 11 9 30 30 H 1.09000 * 109.47351 * 180.02562 * 21 20 18 31 31 H 1.09004 * 109.46856 * 300.01900 * 21 20 18 32 32 H 1.08993 * 109.47454 * 60.01656 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1567 1.2005 0.0000 4 7 1.7848 2.4829 -0.0004 5 6 2.8446 3.2528 0.0004 6 35 2.8169 5.1436 0.0008 7 7 3.9581 2.4927 0.0019 8 6 5.3419 2.9735 -0.0021 9 6 5.8188 3.1439 1.4172 10 1 5.1570 2.9170 2.2401 11 6 7.0998 3.5893 1.6654 12 7 7.9054 3.8660 0.6634 13 14 7.6906 3.8011 3.4248 14 1 6.6009 3.4260 4.3614 15 1 8.8678 2.9271 3.6602 16 1 8.0728 5.2180 3.6514 17 6 3.5459 1.1738 0.0027 18 6 4.2097 -0.0709 0.0047 19 8 5.4268 -0.1201 0.0058 20 7 3.4809 -1.2065 0.0043 21 6 4.1642 -2.5023 0.0059 22 6 2.1373 -1.1666 0.0026 23 8 1.5133 -2.2102 0.0019 24 1 -0.3634 -0.0001 -1.0276 25 1 -0.3633 -0.8900 0.5139 26 1 -0.3633 0.8899 0.5138 27 1 5.9764 2.2501 -0.5142 28 1 5.3922 3.9314 -0.5198 29 1 8.8068 4.1790 0.8380 30 1 3.4247 -3.3031 0.0049 31 1 4.7896 -2.5843 -0.8831 32 1 4.7868 -2.5837 0.8968 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000012437219.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:07:18 Heat of formation + Delta-G solvation = 28.720230 kcal Electronic energy + Delta-G solvation = -22236.928578 eV Core-core repulsion = 18667.309000 eV Total energy + Delta-G solvation = -3569.619577 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 342.011 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.73345 -40.83539 -38.79040 -36.30150 -35.07603 -34.10394 -32.35461 -31.71374 -30.09524 -27.70446 -27.26423 -26.57352 -23.77827 -23.35176 -22.71713 -20.56887 -19.09176 -18.15002 -17.30860 -16.96256 -16.70102 -15.75899 -15.44790 -15.13568 -15.02064 -14.71391 -14.48749 -13.92399 -13.45764 -13.15216 -12.80325 -12.59827 -12.36068 -12.32058 -12.08451 -11.38750 -11.09857 -11.08629 -10.89777 -10.54103 -10.52933 -10.36092 -10.18845 -9.86286 -9.80425 -9.60541 -9.07811 -8.73551 -7.82923 -6.37107 -4.45265 1.08771 1.21498 1.86859 2.13656 2.72156 3.01515 3.15738 3.22201 3.24462 3.32453 3.66490 4.20049 4.38849 4.63845 4.99599 5.18288 5.31735 5.37486 5.44521 5.46315 5.62569 5.66236 5.71350 5.75662 6.14663 6.49481 6.70613 7.00973 7.15767 7.34537 7.55168 7.64149 7.66578 7.70158 8.11610 8.55525 9.21511 10.72026 Molecular weight = 342.01amu Principal moments of inertia in cm(-1) A = 0.010910 B = 0.006184 C = 0.004268 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2565.952692 B = 4526.744098 C = 6558.530424 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.094 3.906 2 N -0.509 5.509 3 C 0.289 3.711 4 N -0.477 5.477 5 C 0.251 3.749 6 Br 0.085 6.915 7 N -0.341 5.341 8 C 0.220 3.780 9 C -0.538 4.538 10 H 0.066 0.934 11 C 0.074 3.926 12 N -0.884 5.884 13 Si 0.907 3.093 14 H -0.270 1.270 15 H -0.279 1.279 16 H -0.278 1.278 17 C -0.119 4.119 18 C 0.588 3.412 19 O -0.480 6.480 20 N -0.556 5.556 21 C 0.086 3.914 22 C 0.712 3.288 23 O -0.551 6.551 24 H 0.068 0.932 25 H 0.088 0.912 26 H 0.089 0.911 27 H 0.072 0.928 28 H 0.065 0.935 29 H 0.270 0.730 30 H 0.101 0.899 31 H 0.078 0.922 32 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.544 -2.380 -2.668 12.086 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.047 4.047 2 N -0.238 5.238 3 C 0.055 3.945 4 N -0.203 5.203 5 C -0.090 4.090 6 Br 0.166 6.834 7 N -0.019 5.019 8 C 0.103 3.897 9 C -0.576 4.576 10 H 0.084 0.916 11 C -0.131 4.131 12 N -0.520 5.520 13 Si 0.734 3.266 14 H -0.195 1.195 15 H -0.205 1.205 16 H -0.204 1.204 17 C -0.242 4.242 18 C 0.381 3.619 19 O -0.352 6.352 20 N -0.301 5.301 21 C -0.055 4.055 22 C 0.414 3.586 23 O -0.426 6.426 24 H 0.087 0.913 25 H 0.107 0.893 26 H 0.108 0.892 27 H 0.090 0.910 28 H 0.083 0.917 29 H 0.079 0.921 30 H 0.120 0.880 31 H 0.097 0.903 32 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -11.584 -1.921 -2.725 12.054 hybrid contribution 1.203 -0.326 0.912 1.544 sum -10.381 -2.247 -1.814 10.775 Atomic orbital electron populations 1.21873 0.74830 1.04608 1.03406 1.43624 1.08396 1.00792 1.70950 1.17927 0.87145 0.86942 1.02510 1.69516 1.28153 0.98007 1.24665 1.24394 0.82671 0.93532 1.08359 1.96822 1.98535 0.90379 1.97694 1.45724 1.10514 1.02265 1.43384 1.20413 0.70736 0.97589 1.00920 1.21043 0.99154 1.47452 0.89913 0.91599 1.24847 0.95777 0.94213 0.98275 1.69912 1.07726 1.43409 1.30998 0.86281 0.78978 0.78033 0.83350 1.19475 1.20484 1.20415 1.18883 0.92901 0.87459 1.24945 1.15454 0.86965 0.82139 0.77347 1.90978 1.11960 1.86695 1.45579 1.45828 1.05798 1.09768 1.68749 1.21894 0.97962 0.81705 1.03932 1.15401 0.81539 0.83277 0.78338 1.90959 1.66039 1.29328 1.56250 0.91323 0.89289 0.89234 0.91043 0.91721 0.92069 0.88039 0.90338 0.90258 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 1.10 10.39 59.85 0.62 1.73 16 2 N -0.51 -8.05 3.06 -128.31 -0.39 -8.44 16 3 C 0.29 5.30 7.63 -154.57 -1.18 4.12 16 4 N -0.48 -8.76 11.16 -11.75 -0.13 -8.89 16 5 C 0.25 4.86 8.33 -90.16 -0.75 4.11 16 6 Br 0.08 1.38 33.32 -68.01 -2.27 -0.89 16 7 N -0.34 -7.39 2.77 -115.03 -0.32 -7.70 16 8 C 0.22 5.33 5.47 -5.19 -0.03 5.31 16 9 C -0.54 -14.13 9.39 -34.44 -0.32 -14.45 16 10 H 0.07 1.78 7.81 -52.49 -0.41 1.37 16 11 C 0.07 1.95 5.46 -17.82 -0.10 1.85 16 12 N -0.88 -24.19 13.29 55.43 0.74 -23.45 16 13 Si 0.91 20.67 29.54 -169.99 -5.02 15.65 16 14 H -0.27 -6.15 7.11 56.52 0.40 -5.75 16 15 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 16 H -0.28 -6.17 7.11 56.52 0.40 -5.77 16 17 C -0.12 -2.46 6.90 -83.67 -0.58 -3.04 16 18 C 0.59 11.83 7.44 -15.12 -0.11 11.72 16 19 O -0.48 -11.01 15.99 5.09 0.08 -10.92 16 20 N -0.56 -9.31 2.96 -131.66 -0.39 -9.70 16 21 C 0.09 1.12 9.99 59.84 0.60 1.72 16 22 C 0.71 11.64 8.12 -87.36 -0.71 10.94 16 23 O -0.55 -9.15 15.01 5.28 0.08 -9.07 16 24 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 25 H 0.09 0.95 7.38 -51.93 -0.38 0.57 16 26 H 0.09 0.98 8.01 -51.93 -0.42 0.57 16 27 H 0.07 1.90 7.27 -51.93 -0.38 1.52 16 28 H 0.07 1.55 7.62 -51.93 -0.40 1.16 16 29 H 0.27 6.95 8.31 -40.82 -0.34 6.61 16 30 H 0.10 1.17 6.80 -51.93 -0.35 0.82 16 31 H 0.08 0.94 8.14 -51.93 -0.42 0.52 16 32 H 0.08 0.99 8.14 -51.93 -0.42 0.56 16 LS Contribution 305.16 15.07 4.60 4.60 Total: -1.00 -30.01 305.16 -8.32 -38.33 By element: Atomic # 1 Polarization: -0.77 SS G_CDS: -2.74 Total: -3.51 kcal Atomic # 6 Polarization: 26.56 SS G_CDS: -2.56 Total: 24.00 kcal Atomic # 7 Polarization: -57.69 SS G_CDS: -0.49 Total: -58.19 kcal Atomic # 8 Polarization: -20.15 SS G_CDS: 0.16 Total: -19.99 kcal Atomic # 14 Polarization: 20.67 SS G_CDS: -5.02 Total: 15.65 kcal Atomic # 35 Polarization: 1.38 SS G_CDS: -2.27 Total: -0.89 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -30.01 -8.32 -38.33 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000012437219.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.053 kcal (2) G-P(sol) polarization free energy of solvation -30.012 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.041 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.321 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.332 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.720 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds