Wall clock time and date at job start Tue Mar 31 2020 05:08:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.50699 * 110.53808 * 2 1 4 4 C 1.38243 * 119.99711 * 240.42755 * 3 2 1 5 5 C 1.38195 * 120.02424 * 179.72670 * 4 3 2 6 6 C 1.38381 * 120.01627 * 0.54576 * 5 4 3 7 7 Cl 1.73599 * 120.00992 * 179.74933 * 6 5 4 8 8 C 1.38309 * 119.98612 * 359.72824 * 6 5 4 9 9 C 1.38339 * 119.98983 * 60.70058 * 3 2 1 10 10 Cl 1.73605 * 120.00834 * 0.02562 * 9 3 2 11 11 N 1.47315 * 110.59822 * 237.17046 * 2 1 3 12 12 C 1.34531 * 106.62231 * 241.47116 * 11 2 1 13 13 O 1.21531 * 123.77438 * 179.97438 * 12 11 2 14 14 N 1.33792 * 112.45526 * 0.02562 * 12 11 2 15 15 C 1.46496 * 124.17665 * 180.02562 * 14 12 11 16 16 C 1.50699 * 109.47549 * 89.97025 * 15 14 12 17 17 H 1.08005 * 119.99791 * 0.02562 * 16 15 14 18 18 C 1.37875 * 120.00297 * 180.02562 * 16 15 14 19 19 N 1.31521 * 120.00099 * 180.02562 * 18 16 15 20 20 Si 1.86803 * 119.99956 * 359.97438 * 18 16 15 21 21 H 1.48507 * 109.46717 * 90.00307 * 20 18 16 22 22 H 1.48500 * 109.47174 * 210.00021 * 20 18 16 23 23 H 1.48499 * 109.47142 * 330.00211 * 20 18 16 24 24 C 1.35122 * 111.68844 * 359.89953 * 14 12 11 25 25 O 1.21232 * 127.33563 * 180.10308 * 24 14 12 26 26 H 1.09002 * 109.47153 * 59.99661 * 1 2 3 27 27 H 1.09001 * 109.46832 * 299.99852 * 1 2 3 28 28 H 1.09004 * 109.47261 * 179.97438 * 1 2 3 29 29 H 1.07999 * 119.98507 * 0.02562 * 4 3 2 30 30 H 1.08001 * 119.99552 * 180.27453 * 5 4 3 31 31 H 1.07998 * 120.01720 * 180.02562 * 8 6 5 32 32 H 0.96999 * 126.69140 * 61.51587 * 11 2 1 33 33 H 1.09004 * 109.46868 * 209.96875 * 15 14 12 34 34 H 1.08995 * 109.47200 * 329.96956 * 15 14 12 35 35 H 0.96992 * 119.99641 * 180.02562 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0587 1.4112 0.0000 4 6 2.8545 1.8511 -1.0413 5 6 3.3349 3.1469 -1.0447 6 6 3.0291 4.0013 -0.0001 7 17 3.6381 5.6270 -0.0013 8 6 2.2376 3.5601 1.0448 9 6 1.7522 2.2644 1.0449 10 17 0.7592 1.7095 2.3563 11 7 2.0482 -0.7476 -1.1587 12 6 2.7599 -1.7771 -0.6654 13 8 3.3284 -2.5987 -1.3575 14 7 2.7711 -1.7962 0.6723 15 6 3.4681 -2.8041 1.4752 16 6 4.8753 -2.3411 1.7517 17 1 5.2163 -1.3908 1.3680 18 6 5.7274 -3.1306 2.4943 19 7 6.9554 -2.7262 2.7360 20 14 5.1374 -4.7738 3.1584 21 1 5.4181 -5.8395 2.1630 22 1 5.8490 -5.0800 4.4254 23 1 3.6762 -4.7083 3.4148 24 6 2.0628 -0.7697 1.1923 25 8 1.8884 -0.5162 2.3649 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 3.0968 1.1834 -1.8548 30 1 3.9530 3.4914 -1.8606 31 1 1.9982 4.2266 1.8602 32 1 1.9049 -0.5380 -2.0949 33 1 2.9403 -2.9457 2.4184 34 1 3.4965 -3.7472 0.9295 35 1 7.5549 -3.2818 3.2582 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000024087942.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:08:43 Heat of formation + Delta-G solvation = -7.625857 kcal Electronic energy + Delta-G solvation = -25592.376347 eV Core-core repulsion = 21644.024785 eV Total energy + Delta-G solvation = -3948.351562 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 342.032 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.20867 -39.61428 -38.03573 -36.99557 -36.45312 -35.90190 -34.85668 -32.63779 -31.57748 -31.17186 -29.44708 -28.54724 -24.91890 -23.49024 -23.10352 -22.75367 -20.97877 -19.84571 -18.13760 -17.35088 -17.18782 -16.49855 -16.17463 -15.86223 -15.17705 -15.03286 -14.92096 -14.53522 -14.26196 -14.07157 -13.87966 -13.53526 -13.33083 -13.02194 -12.67454 -12.49786 -12.20832 -12.12957 -12.00883 -11.87844 -11.43165 -11.21054 -11.14764 -10.71211 -10.64330 -10.39441 -10.14508 -9.70623 -9.60267 -9.43675 -9.18524 -8.72694 -8.67181 -8.66068 -6.16512 -4.18290 0.63273 0.84067 1.65040 2.04605 2.16500 2.71561 3.09556 3.25796 3.31679 3.32524 3.46272 3.61076 4.07538 4.22487 4.32594 4.49057 4.66063 4.73727 4.99355 5.05994 5.14969 5.37506 5.39316 5.41532 5.66378 5.69762 5.82204 5.85512 5.98452 6.24493 6.34367 6.63542 6.68314 6.98827 7.40439 7.71237 7.91844 8.31703 8.63820 8.83120 9.39800 10.96380 Molecular weight = 342.03amu Principal moments of inertia in cm(-1) A = 0.012811 B = 0.004113 C = 0.003895 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2185.082159 B = 6806.601788 C = 7186.160012 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.161 3.839 3 C -0.077 4.077 4 C -0.074 4.074 5 C -0.105 4.105 6 C -0.019 4.019 7 Cl -0.059 7.059 8 C -0.103 4.103 9 C -0.007 4.007 10 Cl -0.020 7.020 11 N -0.731 5.731 12 C 0.705 3.295 13 O -0.535 6.535 14 N -0.552 5.552 15 C 0.221 3.779 16 C -0.537 4.537 17 H 0.076 0.924 18 C 0.079 3.921 19 N -0.889 5.889 20 Si 0.874 3.126 21 H -0.271 1.271 22 H -0.281 1.281 23 H -0.263 1.263 24 C 0.530 3.470 25 O -0.444 6.444 26 H 0.076 0.924 27 H 0.093 0.907 28 H 0.074 0.926 29 H 0.145 0.855 30 H 0.143 0.857 31 H 0.147 0.853 32 H 0.433 0.567 33 H 0.050 0.950 34 H 0.048 0.952 35 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.558 13.843 -7.636 21.492 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C 0.069 3.931 3 C -0.080 4.080 4 C -0.093 4.093 5 C -0.124 4.124 6 C -0.046 4.046 7 Cl -0.030 7.030 8 C -0.122 4.122 9 C -0.034 4.034 10 Cl 0.010 6.990 11 N -0.397 5.397 12 C 0.406 3.594 13 O -0.408 6.408 14 N -0.296 5.296 15 C 0.102 3.898 16 C -0.575 4.575 17 H 0.094 0.906 18 C -0.124 4.124 19 N -0.527 5.527 20 Si 0.700 3.300 21 H -0.196 1.196 22 H -0.206 1.206 23 H -0.188 1.188 24 C 0.314 3.686 25 O -0.312 6.312 26 H 0.095 0.905 27 H 0.111 0.889 28 H 0.093 0.907 29 H 0.163 0.837 30 H 0.161 0.839 31 H 0.165 0.835 32 H 0.277 0.723 33 H 0.068 0.932 34 H 0.066 0.934 35 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -14.130 13.448 -7.028 20.734 hybrid contribution 0.008 -0.559 0.036 0.560 sum -14.123 12.890 -6.992 20.359 Atomic orbital electron populations 1.22234 0.89641 1.04323 1.05026 1.20132 0.96898 0.89138 0.86893 1.19489 0.99620 0.93761 0.95092 1.20930 0.95090 0.95182 0.98097 1.21119 1.00210 0.92892 0.98175 1.20804 0.99551 0.87417 0.96812 1.98386 1.86422 1.19825 1.98407 1.20876 0.97915 0.94645 0.98778 1.20591 0.98031 0.93533 0.91286 1.98425 1.66609 1.88483 1.45480 1.45630 1.56528 1.29383 1.08130 1.15887 0.79095 0.81938 0.82506 1.90975 1.47485 1.41271 1.61055 1.46541 1.47462 1.28499 1.07077 1.19956 0.93424 0.86143 0.90273 1.21094 0.94060 1.07419 1.34943 0.90571 1.24772 0.94571 0.97936 0.95168 1.69877 1.05745 1.38042 1.39015 0.86878 0.79616 0.84360 0.79121 1.19624 1.20648 1.18800 1.20332 0.78139 0.80856 0.89231 1.90816 1.56442 1.67780 1.16159 0.90535 0.88902 0.90740 0.83732 0.83909 0.83484 0.72304 0.93186 0.93441 0.92271 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.62 8.72 37.16 0.32 -1.29 16 2 C 0.16 2.22 1.00 -133.24 -0.13 2.09 16 3 C -0.08 -1.00 4.83 -104.58 -0.50 -1.51 16 4 C -0.07 -0.84 9.37 -39.60 -0.37 -1.21 16 5 C -0.11 -1.09 9.83 -39.54 -0.39 -1.48 16 6 C -0.02 -0.21 6.32 -39.50 -0.25 -0.46 16 7 Cl -0.06 -0.59 28.96 -51.86 -1.50 -2.09 16 8 C -0.10 -1.18 9.62 -39.51 -0.38 -1.56 16 9 C -0.01 -0.09 6.06 -39.50 -0.24 -0.33 16 10 Cl -0.02 -0.26 21.89 -51.86 -1.13 -1.40 16 11 N -0.73 -9.87 4.65 -54.02 -0.25 -10.12 16 12 C 0.70 13.64 8.63 -88.02 -0.76 12.88 16 13 O -0.54 -12.14 17.48 5.34 0.09 -12.05 16 14 N -0.55 -11.72 2.60 -121.93 -0.32 -12.04 16 15 C 0.22 5.43 4.53 -5.20 -0.02 5.40 16 16 C -0.54 -15.49 9.94 -34.44 -0.34 -15.84 16 17 H 0.08 2.42 8.06 -52.48 -0.42 2.00 16 18 C 0.08 2.30 5.47 -17.82 -0.10 2.20 16 19 N -0.89 -27.26 13.96 55.43 0.77 -26.48 16 20 Si 0.87 21.21 27.47 -169.99 -4.67 16.54 16 21 H -0.27 -6.46 7.11 56.52 0.40 -6.06 16 22 H -0.28 -6.72 7.11 56.52 0.40 -6.31 16 23 H -0.26 -6.06 6.54 56.52 0.37 -5.69 16 24 C 0.53 10.00 6.73 -10.39 -0.07 9.93 16 25 O -0.44 -9.13 14.21 5.60 0.08 -9.05 16 26 H 0.08 0.60 8.14 -51.93 -0.42 0.17 16 27 H 0.09 1.00 5.12 -51.93 -0.27 0.74 16 28 H 0.07 0.77 8.14 -51.93 -0.42 0.34 16 29 H 0.15 1.42 6.65 -52.49 -0.35 1.07 16 30 H 0.14 1.17 8.06 -52.49 -0.42 0.74 16 31 H 0.15 1.44 8.06 -52.49 -0.42 1.02 16 32 H 0.43 4.22 8.45 -40.82 -0.34 3.87 16 33 H 0.05 1.21 7.07 -51.93 -0.37 0.85 16 34 H 0.05 1.16 7.29 -51.93 -0.38 0.78 16 35 H 0.27 7.61 8.31 -40.82 -0.34 7.27 16 LS Contribution 326.34 15.07 4.92 4.92 Total: -1.00 -33.90 326.34 -8.23 -42.13 By element: Atomic # 1 Polarization: 3.79 SS G_CDS: -2.99 Total: 0.81 kcal Atomic # 6 Polarization: 12.06 SS G_CDS: -3.24 Total: 8.82 kcal Atomic # 7 Polarization: -48.84 SS G_CDS: 0.21 Total: -48.64 kcal Atomic # 8 Polarization: -21.27 SS G_CDS: 0.17 Total: -21.10 kcal Atomic # 14 Polarization: 21.21 SS G_CDS: -4.67 Total: 16.54 kcal Atomic # 17 Polarization: -0.85 SS G_CDS: -2.64 Total: -3.49 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -33.90 -8.23 -42.13 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000024087942.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.504 kcal (2) G-P(sol) polarization free energy of solvation -33.899 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.605 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.231 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.130 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.626 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds