Wall clock time and date at job start Tue Mar 31 2020 06:20:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38167 * 119.97855 * 2 1 4 4 C 1.38700 * 119.95409 * 179.97438 * 3 2 1 5 5 O 1.35926 * 120.03615 * 180.02562 * 4 3 2 6 6 C 1.42902 * 116.99691 * 179.97438 * 5 4 3 7 7 C 1.50703 * 109.47090 * 179.97438 * 6 5 4 8 8 O 1.21278 * 120.00153 * 0.02562 * 7 6 5 9 9 N 1.34780 * 119.99802 * 179.97438 * 7 6 5 10 10 C 1.39236 * 119.99479 * 175.70944 * 9 7 6 11 11 C 1.39482 * 119.83240 * 215.01267 * 10 9 7 12 12 C 1.36378 * 120.17036 * 179.76117 * 11 10 9 13 13 C 1.40865 * 119.82474 * 0.51768 * 12 11 10 14 14 C 1.41157 * 120.16069 * 179.71729 * 13 12 11 15 15 H 1.08009 * 119.99678 * 214.80397 * 14 13 12 16 16 C 1.39899 * 120.00068 * 34.80438 * 14 13 12 17 17 N 1.30869 * 120.00182 * 355.55467 * 16 14 13 18 18 Si 1.86809 * 119.99933 * 175.56041 * 16 14 13 19 19 H 1.48504 * 109.46995 * 89.99760 * 18 16 14 20 20 H 1.48497 * 109.47102 * 209.99811 * 18 16 14 21 21 H 1.48498 * 109.46933 * 329.99635 * 18 16 14 22 22 C 1.40869 * 119.67595 * 359.74120 * 13 12 11 23 23 C 1.36376 * 119.82466 * 359.97438 * 22 13 12 24 24 C 1.38733 * 119.92046 * 0.02562 * 4 3 2 25 25 C 1.38132 * 119.95744 * 359.97426 * 24 4 3 26 26 C 1.38343 * 119.97785 * 179.97438 * 2 1 3 27 27 Cl 1.73593 * 119.96045 * 359.72678 * 26 2 1 28 28 H 1.08999 * 109.46879 * 270.01904 * 1 2 3 29 29 H 1.08998 * 109.47108 * 30.02007 * 1 2 3 30 30 H 1.09007 * 109.47198 * 150.02293 * 1 2 3 31 31 H 1.08000 * 120.02064 * 359.97438 * 3 2 1 32 32 H 1.08993 * 109.47558 * 300.00356 * 6 5 4 33 33 H 1.09004 * 109.47030 * 60.00714 * 6 5 4 34 34 H 0.96996 * 119.99850 * 355.71251 * 9 7 6 35 35 H 1.08003 * 119.91373 * 0.03012 * 11 10 9 36 36 H 1.08003 * 120.08631 * 180.25308 * 12 11 10 37 37 H 0.96998 * 120.00361 * 180.02562 * 17 16 14 38 38 H 1.07995 * 120.08796 * 179.97438 * 22 13 12 39 39 H 1.08004 * 119.91470 * 179.97438 * 23 22 13 40 40 H 1.08002 * 120.02642 * 179.97438 * 24 4 3 41 41 H 1.07991 * 119.97997 * 180.02562 * 25 24 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1974 1.1968 0.0000 4 6 3.5844 1.1962 0.0005 5 8 4.2652 2.3727 0.0011 6 6 5.6922 2.2963 0.0022 7 6 6.2698 3.6883 0.0020 8 8 5.5321 4.6509 0.0015 9 7 7.6062 3.8633 0.0034 10 6 8.1402 5.1460 -0.0870 11 6 9.3291 5.3549 -0.7859 12 6 9.8558 6.6092 -0.8829 13 6 9.2017 7.6934 -0.2657 14 6 9.7437 8.9935 -0.3565 15 1 9.6470 9.6781 0.4733 16 6 10.4061 9.3954 -1.5214 17 7 10.5998 8.5397 -2.4924 18 14 11.0144 11.1536 -1.6907 19 1 12.4004 11.2505 -1.1662 20 1 10.9983 11.5472 -3.1224 21 1 10.1281 12.0605 -0.9179 22 6 8.0042 7.4736 0.4431 23 6 7.4867 6.2146 0.5264 24 6 4.2759 -0.0065 0.0005 25 6 3.5821 -1.2010 0.0005 26 6 2.1982 -1.1984 0.0005 27 17 1.3287 -2.7008 0.0084 28 1 -0.3633 0.0003 1.0277 29 1 -0.3633 0.8898 -0.5141 30 1 -0.3634 -0.8902 -0.5135 31 1 1.6574 2.1321 -0.0004 32 1 6.0269 1.7638 0.8923 33 1 6.0283 1.7639 -0.8877 34 1 8.1957 3.0958 0.0674 35 1 9.8315 4.5220 -1.2551 36 1 10.7742 6.7700 -1.4279 37 1 11.0595 8.8182 -3.2999 38 1 7.4974 8.2999 0.9191 39 1 6.5689 6.0444 1.0698 40 1 5.3559 -0.0090 0.0005 41 1 4.1200 -2.1374 0.0010 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000000269651.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:20:40 Heat of formation + Delta-G solvation = -33.217636 kcal Electronic energy + Delta-G solvation = -25410.395309 eV Core-core repulsion = 21474.169808 eV Total energy + Delta-G solvation = -3936.225502 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 345.092 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -40.71005 -39.65644 -38.17512 -37.16797 -36.45673 -34.52443 -33.03706 -33.01195 -30.86993 -29.68938 -29.31565 -27.98511 -27.24794 -24.82573 -23.06246 -22.18151 -21.45277 -20.78024 -19.80282 -18.28660 -17.51036 -17.30214 -16.82375 -16.50666 -16.23372 -15.96719 -15.20257 -14.74817 -14.66329 -14.26039 -14.13334 -13.89826 -13.68929 -13.15092 -13.06965 -12.73490 -12.71100 -12.54099 -12.37696 -12.21000 -12.05367 -11.74806 -11.58410 -11.42195 -11.19519 -11.06433 -10.99863 -10.90350 -10.76302 -10.07829 -9.55386 -9.51443 -9.26088 -9.19733 -8.95585 -8.43769 -7.60446 -6.93943 -6.66270 -4.39103 0.82452 0.89668 1.85633 2.40674 2.53567 2.93407 3.04107 3.07748 3.11505 3.22434 3.26869 3.76975 3.95092 4.32783 4.35652 4.57237 4.64822 4.74951 4.83230 4.87416 4.94074 4.99137 5.21538 5.26714 5.51269 5.56940 5.60241 5.75010 5.89400 5.96880 6.12733 6.19851 6.38221 6.65210 6.82213 7.00169 7.02759 7.13412 7.24406 7.58357 7.65666 7.79496 8.00971 8.15257 8.26227 8.53909 8.62797 8.88200 8.93895 10.24747 Molecular weight = 345.09amu Principal moments of inertia in cm(-1) A = 0.037177 B = 0.001605 C = 0.001574 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 752.968482 B =17436.632139 C =17789.951261 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C -0.035 4.035 3 C -0.140 4.140 4 C 0.145 3.855 5 O -0.282 6.282 6 C 0.042 3.958 7 C 0.499 3.501 8 O -0.506 6.506 9 N -0.645 5.645 10 C 0.000 4.000 11 C -0.118 4.118 12 C -0.142 4.142 13 C 0.101 3.899 14 C -0.460 4.460 15 H 0.077 0.923 16 C 0.069 3.931 17 N -0.811 5.811 18 Si 0.916 3.084 19 H -0.270 1.270 20 H -0.278 1.278 21 H -0.263 1.263 22 C -0.205 4.205 23 C -0.084 4.084 24 C -0.207 4.207 25 C -0.064 4.064 26 C -0.079 4.079 27 Cl -0.073 7.073 28 H 0.079 0.921 29 H 0.074 0.926 30 H 0.075 0.925 31 H 0.143 0.857 32 H 0.092 0.908 33 H 0.093 0.907 34 H 0.397 0.603 35 H 0.092 0.908 36 H 0.133 0.867 37 H 0.278 0.722 38 H 0.097 0.903 39 H 0.108 0.892 40 H 0.138 0.862 41 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.698 -20.300 3.307 23.661 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C -0.036 4.036 3 C -0.159 4.159 4 C 0.099 3.901 5 O -0.194 6.194 6 C -0.037 4.037 7 C 0.283 3.717 8 O -0.381 6.381 9 N -0.290 5.290 10 C -0.092 4.092 11 C -0.138 4.138 12 C -0.162 4.162 13 C 0.098 3.902 14 C -0.490 4.490 15 H 0.095 0.905 16 C -0.146 4.146 17 N -0.438 5.438 18 Si 0.741 3.259 19 H -0.195 1.195 20 H -0.203 1.203 21 H -0.187 1.187 22 C -0.225 4.225 23 C -0.104 4.104 24 C -0.226 4.226 25 C -0.083 4.083 26 C -0.106 4.106 27 Cl -0.044 7.044 28 H 0.097 0.903 29 H 0.093 0.907 30 H 0.094 0.906 31 H 0.160 0.840 32 H 0.109 0.891 33 H 0.111 0.889 34 H 0.231 0.769 35 H 0.110 0.890 36 H 0.151 0.849 37 H 0.089 0.911 38 H 0.115 0.885 39 H 0.126 0.874 40 H 0.156 0.844 41 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -12.304 -19.544 3.053 23.295 hybrid contribution 0.776 -0.015 -0.282 0.826 sum -11.527 -19.559 2.771 22.871 Atomic orbital electron populations 1.20907 0.89766 1.03782 1.03251 1.19537 0.96760 0.90446 0.96848 1.20278 0.90869 0.98434 1.06347 1.19127 0.91939 0.84749 0.94326 1.86216 1.18407 1.26998 1.87738 1.22568 0.80050 0.97441 1.03659 1.19890 0.83122 0.89772 0.78885 1.90747 1.58802 1.41280 1.47246 1.42768 1.05307 1.08673 1.72251 1.17211 0.99300 0.83125 1.09593 1.20304 0.96154 0.97521 0.99833 1.21198 1.01472 0.90143 1.03360 1.17750 0.89529 0.93258 0.89639 1.19519 1.30720 0.98226 1.00551 0.90527 1.25890 0.93628 0.99704 0.95357 1.69752 1.32843 1.35463 1.05713 0.86184 0.79586 0.81981 0.78169 1.19490 1.20271 1.18684 1.20812 0.97753 0.95378 1.08571 1.20410 0.98886 0.92475 0.98642 1.21226 1.00694 0.91418 1.09283 1.20798 0.91814 0.98516 0.97126 1.20633 0.92264 0.86664 1.11049 1.98345 1.76805 1.32089 1.97188 0.90276 0.90668 0.90568 0.83951 0.89051 0.88921 0.76949 0.88984 0.84947 0.91075 0.88480 0.87439 0.84400 0.84622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.84 9.61 36.00 0.35 -0.49 16 2 C -0.04 -0.32 5.88 -104.61 -0.62 -0.94 16 3 C -0.14 -1.47 9.64 -39.44 -0.38 -1.85 16 4 C 0.15 1.63 6.69 -39.23 -0.26 1.37 16 5 O -0.28 -3.85 9.67 -39.42 -0.38 -4.23 16 6 C 0.04 0.47 5.22 36.01 0.19 0.66 16 7 C 0.50 8.29 7.74 -10.98 -0.08 8.20 16 8 O -0.51 -10.99 13.92 -14.35 -0.20 -11.19 16 9 N -0.65 -10.49 5.30 -9.74 -0.05 -10.55 16 10 C 0.00 -0.01 6.31 -83.57 -0.53 -0.54 16 11 C -0.12 -2.60 9.90 -39.79 -0.39 -2.99 16 12 C -0.14 -3.56 8.62 -39.26 -0.34 -3.90 16 13 C 0.10 2.67 5.55 -106.80 -0.59 2.07 16 14 C -0.46 -12.11 9.02 -37.85 -0.34 -12.45 16 15 H 0.08 1.94 7.85 -52.48 -0.41 1.53 16 16 C 0.07 1.74 5.42 -17.34 -0.09 1.64 16 17 N -0.81 -20.80 10.60 55.55 0.59 -20.22 16 18 Si 0.92 18.79 29.56 -169.99 -5.03 13.76 16 19 H -0.27 -5.40 7.11 56.52 0.40 -5.00 16 20 H -0.28 -5.61 7.11 56.52 0.40 -5.21 16 21 H -0.26 -5.37 7.11 56.52 0.40 -4.97 16 22 C -0.21 -5.14 9.74 -39.26 -0.38 -5.52 16 23 C -0.08 -1.99 8.61 -39.79 -0.34 -2.33 16 24 C -0.21 -1.86 9.04 -39.44 -0.36 -2.21 16 25 C -0.06 -0.54 9.82 -39.56 -0.39 -0.93 16 26 C -0.08 -0.72 6.31 -39.49 -0.25 -0.97 16 27 Cl -0.07 -0.60 27.29 -51.86 -1.42 -2.02 16 28 H 0.08 0.49 8.14 -51.93 -0.42 0.06 16 29 H 0.07 0.46 8.08 -51.93 -0.42 0.04 16 30 H 0.08 0.50 6.90 -51.93 -0.36 0.14 16 31 H 0.14 1.40 8.06 -52.49 -0.42 0.98 16 32 H 0.09 0.74 7.66 -51.93 -0.40 0.34 16 33 H 0.09 0.79 7.66 -51.93 -0.40 0.40 16 34 H 0.40 4.66 8.82 -40.82 -0.36 4.30 16 35 H 0.09 1.74 8.06 -52.48 -0.42 1.31 16 36 H 0.13 3.44 6.13 -52.48 -0.32 3.11 16 37 H 0.28 6.54 8.30 -40.82 -0.34 6.20 16 38 H 0.10 2.31 8.06 -52.49 -0.42 1.89 16 39 H 0.11 2.52 6.22 -52.48 -0.33 2.19 16 40 H 0.14 0.91 6.30 -52.49 -0.33 0.58 16 41 H 0.14 0.87 8.06 -52.49 -0.42 0.44 16 LS Contribution 365.07 15.07 5.50 5.50 Total: -1.00 -31.39 365.07 -10.37 -41.76 By element: Atomic # 1 Polarization: 12.92 SS G_CDS: -4.57 Total: 8.35 kcal Atomic # 6 Polarization: -16.37 SS G_CDS: -4.82 Total: -21.18 kcal Atomic # 7 Polarization: -31.30 SS G_CDS: 0.54 Total: -30.76 kcal Atomic # 8 Polarization: -14.83 SS G_CDS: -0.58 Total: -15.41 kcal Atomic # 14 Polarization: 18.79 SS G_CDS: -5.03 Total: 13.76 kcal Atomic # 17 Polarization: -0.60 SS G_CDS: -1.42 Total: -2.02 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -31.39 -10.37 -41.76 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000000269651.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.544 kcal (2) G-P(sol) polarization free energy of solvation -31.390 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.846 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.372 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.761 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds