Wall clock time and date at job start Tue Mar 31 2020 06:12:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 N 1.46501 * 109.47155 * 10.76110 * 3 2 1 5 5 C 1.36886 * 120.00059 * 262.06266 * 4 3 2 6 6 H 1.07997 * 120.00461 * 201.83301 * 5 4 3 7 7 C 1.39012 * 119.99653 * 21.83595 * 5 4 3 8 8 N 1.31386 * 120.00135 * 15.76182 * 7 5 4 9 9 Si 1.86809 * 119.99607 * 195.76379 * 7 5 4 10 10 H 1.48499 * 109.47112 * 89.99989 * 9 7 5 11 11 H 1.48495 * 109.46723 * 209.99886 * 9 7 5 12 12 H 1.48500 * 109.47211 * 329.99778 * 9 7 5 13 13 C 1.34780 * 119.99714 * 82.06486 * 4 3 2 14 14 O 1.21731 * 119.99260 * 181.91180 * 13 4 3 15 15 C 1.46556 * 120.00514 * 1.91141 * 13 4 3 16 16 C 1.36776 * 126.18254 * 172.48885 * 15 13 4 17 17 N 1.30945 * 113.92185 * 180.02562 * 16 15 13 18 18 C 1.29368 * 117.46608 * 0.02562 * 17 16 15 19 19 C 1.50708 * 124.69982 * 179.97438 * 18 17 16 20 20 C 1.50699 * 109.47103 * 90.01844 * 19 18 17 21 21 C 1.38247 * 119.97210 * 90.00188 * 20 19 18 22 22 C 1.38197 * 120.02758 * 180.02562 * 21 20 19 23 23 C 1.38463 * 119.97342 * 359.97297 * 22 21 20 24 24 F 1.35097 * 120.02587 * 179.97438 * 23 22 21 25 25 C 1.38456 * 119.94561 * 0.25781 * 23 22 21 26 26 C 1.38195 * 119.97660 * 359.51299 * 25 23 22 27 27 S 1.70918 * 110.59784 * 0.25951 * 18 17 16 28 28 H 1.08993 * 109.47377 * 250.75758 * 3 2 1 29 29 H 1.09004 * 109.46941 * 130.76025 * 3 2 1 30 30 H 0.97000 * 119.99942 * 180.02562 * 8 7 5 31 31 H 1.07999 * 123.03764 * 0.07973 * 16 15 13 32 32 H 1.09005 * 109.47090 * 330.02258 * 19 18 17 33 33 H 1.08995 * 109.46834 * 210.02216 * 19 18 17 34 34 H 1.08004 * 119.98633 * 359.97438 * 21 20 19 35 35 H 1.07997 * 120.01218 * 179.97438 * 22 21 20 36 36 H 1.07998 * 120.01041 * 179.71790 * 25 23 22 37 37 H 1.08007 * 119.99231 * 180.23163 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0969 -1.3561 -0.2579 5 6 3.4798 -2.1554 0.7853 6 1 4.1499 -2.9846 0.6126 7 6 3.0059 -1.9000 2.0669 8 7 1.9706 -1.1096 2.2391 9 14 3.8410 -2.6808 3.5443 10 1 4.9201 -1.7855 4.0333 11 1 2.8432 -2.8889 4.6241 12 1 4.4236 -3.9885 3.1498 13 6 3.1698 -1.8171 -1.5223 14 8 3.5431 -2.9562 -1.7341 15 6 2.7998 -0.9470 -2.6421 16 6 2.9602 -1.2288 -3.9709 17 7 2.5458 -0.2772 -4.7692 18 6 2.0491 0.7853 -4.2236 19 6 1.5255 1.9760 -4.9848 20 6 0.0581 1.7847 -5.2693 21 6 -0.8854 2.2385 -4.3665 22 6 -2.2314 2.0632 -4.6260 23 6 -2.6350 1.4332 -5.7911 24 9 -3.9505 1.2608 -6.0456 25 6 -1.6890 0.9749 -6.6923 26 6 -0.3437 1.1556 -6.4329 27 16 2.0760 0.6549 -2.5196 28 1 2.9712 0.3395 0.9702 29 1 2.9710 0.6718 -0.7784 30 1 1.6402 -0.9311 3.1335 31 1 3.3890 -2.1530 -4.3292 32 1 2.0682 2.0734 -5.9251 33 1 1.6656 2.8781 -4.3893 34 1 -0.5704 2.7295 -3.4575 35 1 -2.9682 2.4174 -3.9203 36 1 -2.0025 0.4794 -7.5992 37 1 0.3943 0.8015 -7.1375 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000069456464.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:12:31 Heat of formation + Delta-G solvation = 34.690372 kcal Electronic energy + Delta-G solvation = -26406.001184 eV Core-core repulsion = 22383.596546 eV Total energy + Delta-G solvation = -4022.404637 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 345.069 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -49.01273 -39.75073 -39.22346 -38.54700 -35.95495 -34.56464 -33.51137 -32.17807 -31.29707 -29.88026 -27.91609 -27.55066 -25.28778 -23.92662 -23.24245 -21.78933 -21.22930 -18.58415 -18.22417 -18.13381 -17.78261 -16.77843 -16.50011 -16.00351 -15.85950 -15.70839 -15.40579 -14.74631 -14.51216 -14.10063 -14.06931 -13.84975 -13.75012 -13.56104 -13.41782 -13.24778 -12.85115 -12.20764 -12.16456 -12.03619 -11.89610 -11.84592 -11.52886 -11.36663 -11.19455 -11.12686 -10.88683 -10.69094 -10.53415 -9.56444 -9.31452 -9.26442 -9.01102 -8.90337 -8.75278 -8.50031 -8.23153 -6.75783 -4.24753 0.59191 0.97413 1.08380 1.56697 1.96672 2.85383 3.04923 3.09411 3.13988 3.38786 3.43261 3.73212 3.93295 3.96190 4.11812 4.31828 4.52786 4.58419 4.60419 4.67969 4.74892 4.90689 4.98900 5.09786 5.26586 5.40938 5.47687 5.55116 5.72522 5.74970 5.78622 5.85867 5.96530 6.06648 6.23198 6.32940 6.49558 6.72375 7.21323 7.61489 7.98030 8.02527 8.51882 8.72133 8.87579 9.44822 10.29137 Molecular weight = 345.07amu Principal moments of inertia in cm(-1) A = 0.016968 B = 0.003162 C = 0.002882 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1649.765458 B = 8852.787897 C = 9713.438632 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.448 5.448 2 C 0.238 3.762 3 C 0.211 3.789 4 N -0.424 5.424 5 C -0.302 4.302 6 H 0.115 0.885 7 C 0.032 3.968 8 N -0.870 5.870 9 Si 0.938 3.062 10 H -0.272 1.272 11 H -0.282 1.282 12 H -0.265 1.265 13 C 0.516 3.484 14 O -0.559 6.559 15 C -0.247 4.247 16 C 0.082 3.918 17 N -0.469 5.469 18 C -0.002 4.002 19 C 0.002 3.998 20 C -0.091 4.091 21 C -0.080 4.080 22 C -0.151 4.151 23 C 0.095 3.905 24 F -0.142 7.142 25 C -0.155 4.155 26 C -0.073 4.073 27 S 0.174 5.826 28 H 0.145 0.855 29 H 0.084 0.916 30 H 0.280 0.720 31 H 0.183 0.817 32 H 0.102 0.898 33 H 0.095 0.905 34 H 0.134 0.866 35 H 0.136 0.864 36 H 0.135 0.865 37 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.140 11.553 -10.754 15.825 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.128 5.128 2 C -0.082 4.082 3 C 0.081 3.919 4 N -0.142 5.142 5 C -0.430 4.430 6 H 0.133 0.867 7 C -0.173 4.173 8 N -0.507 5.507 9 Si 0.764 3.236 10 H -0.198 1.198 11 H -0.207 1.207 12 H -0.190 1.190 13 C 0.304 3.696 14 O -0.443 6.443 15 C -0.372 4.372 16 C -0.075 4.075 17 N -0.183 5.183 18 C -0.276 4.276 19 C -0.039 4.039 20 C -0.093 4.093 21 C -0.099 4.099 22 C -0.169 4.169 23 C 0.076 3.924 24 F -0.121 7.121 25 C -0.173 4.173 26 C -0.091 4.091 27 S 0.433 5.567 28 H 0.162 0.838 29 H 0.101 0.899 30 H 0.091 0.909 31 H 0.200 0.800 32 H 0.120 0.880 33 H 0.113 0.887 34 H 0.152 0.848 35 H 0.154 0.846 36 H 0.153 0.847 37 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -3.076 11.711 -10.474 16.010 hybrid contribution 0.623 -1.261 0.566 1.516 sum -2.453 10.450 -9.908 14.608 Atomic orbital electron populations 1.80912 1.12997 1.07708 1.11168 1.28827 0.95085 0.93220 0.91024 1.19009 0.82620 0.86128 1.04117 1.43533 1.54485 1.10874 1.05297 1.19888 1.26059 1.12429 0.84626 0.86700 1.25486 0.94823 0.97217 0.99784 1.69770 1.20214 1.36213 1.24541 0.85710 0.78732 0.79785 0.79400 1.19755 1.20703 1.18961 1.16627 0.85236 0.86272 0.81420 1.90707 1.52271 1.17908 1.83429 1.26455 1.11749 0.98904 1.00081 1.22202 0.99660 0.98736 0.86911 1.66048 1.12588 1.00544 1.39131 1.27361 1.03386 0.98779 0.98061 1.19104 0.91278 0.92703 1.00795 1.19726 0.94686 0.99762 0.95109 1.20962 0.91689 0.98456 0.98750 1.21135 0.97299 1.01767 0.96737 1.17760 0.77734 1.00899 0.96006 1.91493 1.32716 1.93612 1.94243 1.21134 0.92927 1.02905 1.00376 1.20946 0.94973 0.96328 0.96848 1.84442 1.55472 1.13134 1.03683 0.83793 0.89921 0.90946 0.80031 0.88013 0.88683 0.84829 0.84589 0.84737 0.84604 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.45 -10.12 18.54 42.15 0.78 -9.33 16 2 C 0.24 5.04 11.07 -20.76 -0.23 4.81 16 3 C 0.21 4.10 4.73 -6.83 -0.03 4.07 16 4 N -0.42 -9.75 2.60 -119.47 -0.31 -10.06 16 5 C -0.30 -7.42 9.27 -15.01 -0.14 -7.56 16 6 H 0.12 2.93 7.43 -52.49 -0.39 2.54 16 7 C 0.03 0.75 4.97 -17.46 -0.09 0.66 16 8 N -0.87 -20.60 9.40 55.50 0.52 -20.07 16 9 Si 0.94 18.42 29.58 -169.99 -5.03 13.39 16 10 H -0.27 -5.14 7.11 56.52 0.40 -4.73 16 11 H -0.28 -5.61 7.11 56.52 0.40 -5.21 16 12 H -0.27 -5.30 7.11 56.52 0.40 -4.90 16 13 C 0.52 12.00 7.50 -12.91 -0.10 11.91 16 14 O -0.56 -14.71 16.58 5.16 0.09 -14.62 16 15 C -0.25 -4.80 6.26 -36.76 -0.23 -5.03 16 16 C 0.08 1.47 11.17 -18.46 -0.21 1.26 16 17 N -0.47 -7.63 10.50 -11.25 -0.12 -7.75 16 18 C 0.00 -0.03 6.61 -13.31 -0.09 -0.11 16 19 C 0.00 0.02 5.92 -29.03 -0.17 -0.16 16 20 C -0.09 -1.01 5.12 -104.62 -0.54 -1.55 16 21 C -0.08 -0.89 9.70 -39.59 -0.38 -1.28 16 22 C -0.15 -1.73 10.03 -39.51 -0.40 -2.12 16 23 C 0.10 1.15 7.30 -39.42 -0.29 0.86 16 24 F -0.14 -1.80 17.27 2.25 0.04 -1.76 16 25 C -0.15 -1.70 10.03 -39.52 -0.40 -2.09 16 26 C -0.07 -0.79 9.70 -39.60 -0.38 -1.17 16 27 S 0.17 2.72 16.42 -107.50 -1.77 0.95 16 28 H 0.14 2.77 6.44 -51.93 -0.33 2.44 16 29 H 0.08 1.35 4.52 -22.92 -0.10 1.25 16 30 H 0.28 6.36 8.31 -40.82 -0.34 6.02 16 31 H 0.18 3.10 8.06 -52.49 -0.42 2.68 16 32 H 0.10 0.91 8.09 -51.93 -0.42 0.49 16 33 H 0.09 0.75 8.08 -51.93 -0.42 0.33 16 34 H 0.13 1.28 8.06 -52.48 -0.42 0.86 16 35 H 0.14 1.36 8.06 -52.49 -0.42 0.93 16 36 H 0.13 1.22 8.06 -52.49 -0.42 0.79 16 37 H 0.14 1.28 8.06 -52.48 -0.42 0.86 16 LS Contribution 344.74 15.07 5.20 5.20 Total: -1.00 -30.03 344.74 -7.18 -37.21 By element: Atomic # 1 Polarization: 7.26 SS G_CDS: -2.92 Total: 4.34 kcal Atomic # 6 Polarization: 6.17 SS G_CDS: -3.66 Total: 2.51 kcal Atomic # 7 Polarization: -48.09 SS G_CDS: 0.87 Total: -47.21 kcal Atomic # 8 Polarization: -14.71 SS G_CDS: 0.09 Total: -14.62 kcal Atomic # 9 Polarization: -1.80 SS G_CDS: 0.04 Total: -1.76 kcal Atomic # 14 Polarization: 18.42 SS G_CDS: -5.03 Total: 13.39 kcal Atomic # 16 Polarization: 2.72 SS G_CDS: -1.77 Total: 0.95 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -30.03 -7.18 -37.21 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000069456464.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.904 kcal (2) G-P(sol) polarization free energy of solvation -30.032 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.872 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.181 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.213 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.690 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds