Wall clock time and date at job start Tue Mar 31 2020 05:50:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.39013 * 124.29746 * 2 1 4 4 C 1.39030 * 131.63975 * 359.97289 * 3 2 1 5 5 C 1.38053 * 120.14709 * 179.19081 * 4 3 2 6 6 C 1.38653 * 120.64859 * 0.69688 * 5 4 3 7 7 Br 1.89098 * 119.96152 * 179.54385 * 6 5 4 8 8 C 1.38038 * 120.07482 * 359.55926 * 6 5 4 9 9 C 1.39255 * 119.70480 * 0.02562 * 8 6 5 10 10 C 1.47874 * 133.22138 * 180.02562 * 9 8 6 11 11 N 1.31439 * 127.50891 * 359.97438 * 10 9 8 12 12 N 1.28997 * 119.99876 * 353.40729 * 11 10 9 13 13 C 1.34778 * 120.00273 * 173.94592 * 12 11 10 14 14 O 1.21805 * 119.99627 * 0.27262 * 13 12 11 15 15 C 1.41392 * 120.00227 * 180.27762 * 13 12 11 16 16 H 1.08000 * 119.99688 * 359.97438 * 15 13 12 17 17 C 1.40258 * 119.99674 * 179.97438 * 15 13 12 18 18 N 1.30570 * 120.00289 * 359.97438 * 17 15 13 19 19 Si 1.86805 * 119.99940 * 179.97438 * 17 15 13 20 20 H 1.48499 * 109.47178 * 59.99435 * 19 17 15 21 21 H 1.48499 * 109.47242 * 180.02562 * 19 17 15 22 22 H 1.48497 * 109.46758 * 299.99919 * 19 17 15 23 23 C 1.34395 * 124.29395 * 179.97438 * 2 1 3 24 24 O 1.21661 * 126.05427 * 0.04415 * 23 2 1 25 25 H 1.08994 * 109.47178 * 180.02562 * 1 2 3 26 26 H 1.09005 * 109.47051 * 300.00370 * 1 2 3 27 27 H 1.08994 * 109.46978 * 60.00241 * 1 2 3 28 28 H 1.08005 * 119.92700 * 359.97438 * 4 3 2 29 29 H 1.08003 * 119.67091 * 180.25730 * 5 4 3 30 30 H 1.08001 * 120.14864 * 180.02562 * 8 6 5 31 31 H 0.97001 * 120.00133 * 354.21900 * 12 11 10 32 32 H 0.96998 * 120.00060 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2483 1.1484 0.0000 4 6 1.9105 2.4970 -0.0005 5 6 2.8999 3.4597 0.0165 6 6 4.2383 3.0976 0.0197 7 35 5.5777 4.4324 0.0300 8 6 4.5941 1.7638 0.0150 9 6 3.6033 0.7854 0.0066 10 6 3.6400 -0.6929 0.0004 11 7 4.7022 -1.4671 0.0013 12 7 5.8775 -0.9497 -0.1202 13 6 6.9719 -1.7267 0.0027 14 8 6.8510 -2.9184 0.2235 15 6 8.2604 -1.1584 -0.1246 16 1 8.3675 -0.1018 -0.3208 17 6 9.3992 -1.9670 0.0038 18 7 9.2696 -3.2443 0.2414 19 14 11.1015 -1.2164 -0.1651 20 1 11.2859 -0.1694 0.8717 21 1 12.1286 -2.2744 0.0106 22 1 11.2429 -0.6088 -1.5127 23 6 2.2222 -1.1103 0.0005 24 8 1.8130 -2.2561 0.0003 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 0.8715 2.7923 -0.0014 29 1 2.6287 4.5051 0.0202 30 1 5.6363 1.4805 0.0179 31 1 5.9739 -0.0006 -0.2960 32 1 10.0572 -3.8035 0.3298 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000005603473.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:50:29 Heat of formation + Delta-G solvation = 24.152738 kcal Electronic energy + Delta-G solvation = -21855.084084 eV Core-core repulsion = 18249.777694 eV Total energy + Delta-G solvation = -3605.306390 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 351.001 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -41.53973 -39.26688 -38.33149 -36.10203 -35.85640 -33.05491 -32.41415 -31.73185 -30.31223 -29.27468 -27.60424 -26.88011 -24.45838 -22.49683 -21.96223 -20.59547 -20.19700 -18.25284 -17.31472 -16.82429 -16.18435 -16.04461 -15.90949 -15.50236 -14.49492 -14.43095 -14.34679 -14.15818 -13.64838 -13.29895 -13.21691 -13.01763 -12.64137 -12.34686 -11.75452 -11.70876 -11.65812 -11.34468 -11.09351 -11.03699 -10.59408 -10.44357 -10.35599 -9.96171 -9.63838 -9.52875 -9.20350 -8.23687 -8.19510 -7.52426 -6.71096 -5.29285 0.61725 1.00373 1.54860 1.84254 2.55613 2.93380 2.98416 3.01590 3.37061 3.48757 3.59817 3.87447 4.15666 4.22860 4.58743 4.70211 4.85382 4.98845 5.16233 5.16669 5.23522 5.33078 5.45917 5.51104 5.67594 5.84006 6.01823 6.10448 6.36281 6.60787 6.92206 6.94411 7.25842 7.61464 8.09002 8.35693 8.43082 8.76612 10.03045 10.19814 Molecular weight = 351.00amu Principal moments of inertia in cm(-1) A = 0.008552 B = 0.004749 C = 0.003062 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3273.455011 B = 5894.254648 C = 9142.102855 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.083 3.917 2 N -0.547 5.547 3 C 0.167 3.833 4 C -0.129 4.129 5 C -0.065 4.065 6 C -0.106 4.106 7 Br -0.048 7.048 8 C -0.055 4.055 9 C -0.099 4.099 10 C -0.101 4.101 11 N -0.051 5.051 12 N -0.484 5.484 13 C 0.525 3.475 14 O -0.524 6.524 15 C -0.518 4.518 16 H 0.080 0.920 17 C 0.084 3.916 18 N -0.731 5.731 19 Si 0.924 3.076 20 H -0.261 1.261 21 H -0.274 1.274 22 H -0.262 1.262 23 C 0.596 3.404 24 O -0.497 6.497 25 H 0.093 0.907 26 H 0.071 0.929 27 H 0.071 0.929 28 H 0.135 0.865 29 H 0.139 0.861 30 H 0.134 0.866 31 H 0.372 0.628 32 H 0.282 0.718 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.656 18.600 -0.944 21.457 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 N -0.269 5.269 3 C 0.066 3.934 4 C -0.151 4.151 5 C -0.086 4.086 6 C -0.187 4.187 7 Br 0.037 6.963 8 C -0.078 4.078 9 C -0.106 4.106 10 C -0.276 4.276 11 N 0.114 4.886 12 N -0.236 5.236 13 C 0.337 3.663 14 O -0.401 6.401 15 C -0.554 4.554 16 H 0.098 0.902 17 C -0.142 4.142 18 N -0.358 5.358 19 Si 0.747 3.253 20 H -0.186 1.186 21 H -0.199 1.199 22 H -0.186 1.186 23 C 0.385 3.615 24 O -0.368 6.368 25 H 0.111 0.889 26 H 0.089 0.911 27 H 0.089 0.911 28 H 0.152 0.848 29 H 0.156 0.844 30 H 0.151 0.849 31 H 0.214 0.786 32 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -10.108 16.299 -0.692 19.192 hybrid contribution 0.345 1.447 -0.201 1.501 sum -9.764 17.746 -0.893 20.274 Atomic orbital electron populations 1.21820 0.76690 1.04905 1.02434 1.45155 1.06993 1.05072 1.69663 1.18245 0.89489 0.87989 0.97716 1.20159 0.99986 0.88652 1.06282 1.20779 0.90017 0.99655 0.98165 1.21391 0.93351 0.92560 1.11359 1.96715 1.51147 1.50592 1.97865 1.20531 0.98599 0.90183 0.98511 1.19432 0.92925 0.93137 1.05065 1.22077 0.93413 0.88172 1.23913 1.71514 0.91755 1.29961 0.95357 1.46605 1.02718 1.12945 1.61363 1.17474 0.81537 0.86518 0.80797 1.90764 1.84003 1.14381 1.50993 1.19960 0.88721 0.96956 1.49729 0.90211 1.25834 1.01433 0.94380 0.92512 1.69940 1.32230 1.05204 1.28420 0.86131 0.79536 0.79554 0.80123 1.18573 1.19912 1.18589 1.17414 0.84854 0.83494 0.75730 1.90845 1.78622 1.18451 1.48870 0.88856 0.91056 0.91065 0.84756 0.84363 0.84893 0.78632 0.90668 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.77 10.93 59.84 0.65 1.43 16 2 N -0.55 -7.73 3.13 -121.78 -0.38 -8.11 16 3 C 0.17 2.24 6.74 -83.54 -0.56 1.68 16 4 C -0.13 -1.29 9.88 -39.36 -0.39 -1.68 16 5 C -0.06 -0.64 9.76 -39.50 -0.39 -1.03 16 6 C -0.11 -1.29 6.22 -39.50 -0.25 -1.53 16 7 Br -0.05 -0.54 33.70 -68.01 -2.29 -2.83 16 8 C -0.06 -0.80 9.11 -39.28 -0.36 -1.16 16 9 C -0.10 -1.59 6.12 -104.81 -0.64 -2.23 16 10 C -0.10 -2.01 7.51 -80.18 -0.60 -2.61 16 11 N -0.05 -1.20 10.67 34.76 0.37 -0.83 16 12 N -0.48 -11.17 5.84 29.05 0.17 -11.00 16 13 C 0.52 14.38 7.64 -15.06 -0.12 14.27 16 14 O -0.52 -16.70 15.18 5.10 0.08 -16.62 16 15 C -0.52 -13.22 9.30 -37.62 -0.35 -13.57 16 16 H 0.08 1.77 7.85 -52.49 -0.41 1.36 16 17 C 0.08 2.11 5.50 -17.33 -0.10 2.02 16 18 N -0.73 -20.04 11.72 55.56 0.65 -19.39 16 19 Si 0.92 17.94 29.56 -169.99 -5.03 12.91 16 20 H -0.26 -4.92 7.11 56.52 0.40 -4.52 16 21 H -0.27 -5.21 7.11 56.52 0.40 -4.81 16 22 H -0.26 -4.92 7.11 56.52 0.40 -4.52 16 23 C 0.60 11.22 8.07 -12.52 -0.10 11.12 16 24 O -0.50 -10.75 17.46 5.22 0.09 -10.66 16 25 H 0.09 0.93 7.58 -51.93 -0.39 0.53 16 26 H 0.07 0.51 8.14 -51.93 -0.42 0.09 16 27 H 0.07 0.50 8.14 -51.93 -0.42 0.08 16 28 H 0.13 0.91 8.06 -52.48 -0.42 0.49 16 29 H 0.14 1.01 8.06 -52.48 -0.42 0.58 16 30 H 0.13 1.97 5.69 -52.49 -0.30 1.67 16 31 H 0.37 7.26 4.77 -190.12 -0.91 6.35 16 32 H 0.28 6.90 8.29 -40.82 -0.34 6.56 16 LS Contribution 311.95 15.07 4.70 4.70 Total: -1.00 -33.64 311.95 -7.66 -41.30 By element: Atomic # 1 Polarization: 6.69 SS G_CDS: -2.84 Total: 3.85 kcal Atomic # 6 Polarization: 9.88 SS G_CDS: -3.19 Total: 6.69 kcal Atomic # 7 Polarization: -40.15 SS G_CDS: 0.81 Total: -39.34 kcal Atomic # 8 Polarization: -27.45 SS G_CDS: 0.17 Total: -27.29 kcal Atomic # 14 Polarization: 17.94 SS G_CDS: -5.03 Total: 12.91 kcal Atomic # 35 Polarization: -0.54 SS G_CDS: -2.29 Total: -2.83 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -33.64 -7.66 -41.30 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000005603473.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.454 kcal (2) G-P(sol) polarization free energy of solvation -33.636 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.817 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.665 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.301 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.153 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds