Wall clock time and date at job start Tue Mar 31 2020 05:05:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35954 * 116.99449 * 2 1 4 4 C 1.37970 * 119.98868 * 359.72507 * 3 2 1 5 5 C 1.40254 * 119.84322 * 179.73314 * 4 3 2 6 6 C 1.46376 * 120.09744 * 180.29688 * 5 4 3 7 7 C 1.37863 * 120.00344 * 43.57070 * 6 5 4 8 8 C 1.43201 * 120.00200 * 189.98264 * 7 6 5 9 9 N 7.58139 * 66.71310 * 4.54343 * 2 1 3 10 10 C 1.47116 * 119.99740 * 9.98654 * 7 6 5 11 11 O 1.21659 * 120.00094 * 7.65283 * 10 7 6 12 12 N 1.34774 * 120.00323 * 187.65134 * 10 7 6 13 13 C 1.46491 * 120.00179 * 180.02562 * 12 10 7 14 14 C 1.46505 * 119.99511 * 359.97438 * 12 10 7 15 15 C 1.40309 * 119.80715 * 0.52278 * 5 4 3 16 16 C 1.37630 * 119.96256 * 359.74833 * 15 5 4 17 17 Cl 1.73601 * 119.91592 * 180.02562 * 16 15 5 18 18 C 1.39259 * 120.16090 * 0.02562 * 16 15 5 19 19 O 1.35559 * 119.90243 * 179.97438 * 18 16 15 20 20 C 1.34727 * 116.99824 * 269.97765 * 19 18 16 21 21 H 1.07997 * 119.99939 * 0.02562 * 20 19 18 22 22 C 1.38764 * 119.99514 * 180.02562 * 20 19 18 23 23 N 1.31483 * 119.99477 * 180.02562 * 22 20 19 24 24 Si 1.86799 * 120.00353 * 359.97438 * 22 20 19 25 25 H 1.48502 * 109.46765 * 89.99985 * 24 22 20 26 26 H 1.48500 * 109.46849 * 210.00101 * 24 22 20 27 27 H 1.48500 * 109.46860 * 330.00332 * 24 22 20 28 28 H 1.09003 * 109.46481 * 180.02562 * 1 2 3 29 29 H 1.09001 * 109.47101 * 299.99811 * 1 2 3 30 30 H 1.08997 * 109.47190 * 59.99858 * 1 2 3 31 31 H 1.08007 * 120.07576 * 359.97438 * 4 3 2 32 32 H 1.08000 * 120.00227 * 223.57706 * 6 5 4 33 33 H 1.09002 * 109.47518 * 89.99698 * 13 12 10 34 34 H 1.09001 * 109.47110 * 209.99468 * 13 12 10 35 35 H 1.09000 * 109.47261 * 329.99646 * 13 12 10 36 36 H 1.08991 * 109.46725 * 60.00397 * 14 12 10 37 37 H 1.09007 * 109.46593 * 180.02562 * 14 12 10 38 38 H 1.08999 * 109.47240 * 299.99766 * 14 12 10 39 39 H 1.07997 * 120.01736 * 179.73548 * 15 5 4 40 40 H 0.97002 * 119.99805 * 179.97438 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 1.2944 2.3683 -0.0057 5 6 1.9342 3.6164 -0.0001 6 6 1.1420 4.8473 0.0005 7 6 0.0386 4.9567 0.8197 8 6 -0.8573 6.0637 0.6702 9 7 -1.5681 6.9419 0.5516 10 6 -0.2183 3.9360 1.8476 11 8 0.6109 3.0739 2.0695 12 7 -1.3723 3.9560 2.5435 13 6 -1.6279 2.9400 3.5674 14 6 -2.3707 4.9945 2.2767 15 6 3.3357 3.6817 0.0003 16 6 4.0779 2.5227 0.0004 17 17 5.8119 2.6049 0.0015 18 6 3.4412 1.2842 -0.0005 19 8 4.1773 0.1459 -0.0010 20 6 4.5093 -0.3673 -1.2016 21 1 4.1902 0.1272 -2.1072 22 6 5.2613 -1.5312 -1.2747 23 7 5.5858 -2.0317 -2.4464 24 14 5.8139 -2.3861 0.2916 25 1 4.7844 -3.3724 0.7067 26 1 7.1000 -3.0866 0.0457 27 1 5.9966 -1.3787 1.3673 28 1 -0.3632 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8899 31 1 0.2158 2.3129 -0.0106 32 1 1.4218 5.6699 -0.6410 33 1 -1.2540 3.2912 4.5292 34 1 -2.7003 2.7580 3.6390 35 1 -1.1197 2.0147 3.2960 36 1 -2.6912 4.9316 1.2369 37 1 -3.2299 4.8493 2.9317 38 1 -1.9335 5.9753 2.4635 39 1 3.8319 4.6410 0.0004 40 1 6.1118 -2.8451 -2.4976 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000059334307.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:05:39 Heat of formation + Delta-G solvation = 15.616975 kcal Electronic energy + Delta-G solvation = -28632.429681 eV Core-core repulsion = 24442.439844 eV Total energy + Delta-G solvation = -4189.989837 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 350.087 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -40.71287 -39.71145 -37.56086 -37.32105 -36.94955 -35.90282 -35.39364 -33.44608 -31.95446 -29.79876 -29.64732 -28.40866 -27.16334 -26.48428 -25.08096 -23.48707 -22.04966 -21.40870 -20.53484 -18.46683 -18.03156 -17.55144 -16.68300 -16.54555 -16.32966 -16.00564 -15.42163 -15.26342 -14.76023 -14.61157 -14.26963 -14.05495 -13.96571 -13.82882 -13.60128 -13.36767 -13.17879 -13.10217 -12.85370 -12.55809 -12.42146 -12.23860 -12.07445 -11.88197 -11.79656 -11.38155 -11.24218 -10.95292 -10.85947 -10.44456 -10.21121 -10.08627 -10.01043 -9.59634 -9.44686 -9.00804 -8.30821 -7.92190 -7.56341 -6.03770 -3.75728 0.04003 1.62404 1.73978 2.23384 2.40421 2.64490 2.67002 3.26216 3.43452 3.46944 3.50372 3.64428 3.76056 3.90012 4.22253 4.54783 4.59403 4.63348 4.87792 4.89687 4.97140 5.14758 5.22868 5.23816 5.26132 5.29325 5.31187 5.40058 5.45922 5.46388 5.57736 5.70429 5.72302 6.05466 6.09761 6.31649 6.40305 6.54460 6.77883 6.95040 7.09262 7.72117 7.87842 7.95255 8.33693 9.32306 9.88147 11.07445 Molecular weight = 350.09amu Principal moments of inertia in cm(-1) A = 0.015475 B = 0.003498 C = 0.003138 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1808.893983 B = 8002.628757 C = 8919.357573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.286 6.286 3 C 0.099 3.901 4 C -0.104 4.104 5 C -0.091 4.091 6 C 0.101 3.899 7 C -0.158 4.158 8 C 0.267 3.733 9 N -0.427 5.427 10 C 0.562 3.438 11 O -0.498 6.498 12 N -0.619 5.619 13 C 0.086 3.914 14 C 0.069 3.931 15 C -0.092 4.092 16 C -0.048 4.048 17 Cl -0.048 7.048 18 C 0.166 3.834 19 O -0.253 6.253 20 C -0.353 4.353 21 H 0.085 0.915 22 C 0.059 3.941 23 N -0.903 5.903 24 Si 0.897 3.103 25 H -0.279 1.279 26 H -0.289 1.289 27 H -0.260 1.260 28 H 0.097 0.903 29 H 0.050 0.950 30 H 0.048 0.952 31 H 0.125 0.875 32 H 0.151 0.849 33 H 0.056 0.944 34 H 0.069 0.931 35 H 0.081 0.919 36 H 0.063 0.937 37 H 0.080 0.920 38 H 0.065 0.935 39 H 0.135 0.865 40 H 0.271 0.729 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.025 13.795 8.049 21.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.199 6.199 3 C 0.052 3.948 4 C -0.124 4.124 5 C -0.092 4.092 6 C 0.078 3.922 7 C -0.165 4.165 8 C -0.046 4.046 9 N -0.104 5.104 10 C 0.350 3.650 11 O -0.373 6.373 12 N -0.354 5.354 13 C -0.056 4.056 14 C -0.075 4.075 15 C -0.112 4.112 16 C -0.075 4.075 17 Cl -0.019 7.019 18 C 0.118 3.882 19 O -0.166 6.166 20 C -0.428 4.428 21 H 0.103 0.897 22 C -0.140 4.140 23 N -0.547 5.547 24 Si 0.724 3.276 25 H -0.205 1.205 26 H -0.215 1.215 27 H -0.185 1.185 28 H 0.115 0.885 29 H 0.069 0.931 30 H 0.066 0.934 31 H 0.143 0.857 32 H 0.168 0.832 33 H 0.075 0.925 34 H 0.088 0.912 35 H 0.100 0.900 36 H 0.081 0.919 37 H 0.098 0.902 38 H 0.084 0.916 39 H 0.153 0.847 40 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges -15.304 14.218 8.120 22.412 hybrid contribution 0.165 -0.426 0.651 0.796 sum -15.138 13.792 8.771 22.278 Atomic orbital electron populations 1.23014 0.79780 1.03561 1.00466 1.86326 1.19840 1.25334 1.88394 1.19217 0.91484 0.84729 0.99367 1.21018 0.99076 0.90667 1.01609 1.18058 0.92197 0.91393 1.07535 1.23043 0.86711 0.94671 0.87807 1.18153 0.98788 0.95050 1.04492 1.25264 0.93171 0.92734 0.93437 1.81330 1.09807 1.10537 1.08722 1.17716 0.81672 0.84267 0.81323 1.91023 1.43813 1.36250 1.66213 1.47687 1.18077 1.30554 1.39036 1.21707 1.01369 0.92094 0.90461 1.22300 0.92226 0.91105 1.01861 1.20785 0.91621 0.97166 1.01590 1.20924 0.85922 0.93408 1.07295 1.98355 1.08235 1.98460 1.96831 1.18137 0.86962 0.87399 0.95670 1.83440 1.67859 1.34636 1.30677 1.20291 1.33321 1.08408 0.80800 0.89733 1.24189 0.96651 0.95895 0.97277 1.69616 1.39897 1.22370 1.22800 0.86295 0.77609 0.79869 0.83836 1.20455 1.21491 1.18457 0.88507 0.93135 0.93351 0.85686 0.83189 0.92533 0.91205 0.89997 0.91855 0.90155 0.91628 0.84733 0.91859 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.38 9.81 101.05 0.99 1.37 16 2 O -0.29 -5.76 10.28 -34.23 -0.35 -6.11 16 3 C 0.10 1.95 6.70 -39.14 -0.26 1.69 16 4 C -0.10 -1.62 5.57 -38.92 -0.22 -1.84 16 5 C -0.09 -1.24 4.62 -105.09 -0.49 -1.72 16 6 C 0.10 0.97 9.53 -36.45 -0.35 0.62 16 7 C -0.16 -1.55 5.73 -104.51 -0.60 -2.15 16 8 C 0.27 2.54 10.89 -22.47 -0.24 2.30 16 9 N -0.43 -4.58 17.10 41.84 0.72 -3.87 16 10 C 0.56 6.45 6.67 -12.66 -0.08 6.36 16 11 O -0.50 -7.32 11.78 5.23 0.06 -7.26 16 12 N -0.62 -5.72 3.27 -190.92 -0.63 -6.35 16 13 C 0.09 0.66 10.40 59.84 0.62 1.29 16 14 C 0.07 0.51 8.61 59.85 0.52 1.02 16 15 C -0.09 -1.37 9.56 -39.03 -0.37 -1.75 16 16 C -0.05 -0.92 6.32 -39.42 -0.25 -1.17 16 17 Cl -0.05 -0.93 28.49 -51.86 -1.48 -2.41 16 18 C 0.17 3.72 5.61 -38.66 -0.22 3.50 16 19 O -0.25 -6.75 7.72 -13.71 -0.11 -6.86 16 20 C -0.35 -10.17 10.28 30.93 0.32 -9.85 16 21 H 0.08 2.58 7.99 -52.49 -0.42 2.16 16 22 C 0.06 1.72 5.50 -17.51 -0.10 1.62 16 23 N -0.90 -27.45 13.96 55.49 0.77 -26.68 16 24 Si 0.90 23.14 28.62 -169.99 -4.86 18.28 16 25 H -0.28 -7.10 7.11 56.52 0.40 -6.69 16 26 H -0.29 -7.21 7.11 56.52 0.40 -6.81 16 27 H -0.26 -6.75 7.11 56.52 0.40 -6.35 16 28 H 0.10 1.14 8.14 -51.93 -0.42 0.72 16 29 H 0.05 0.62 7.67 -51.93 -0.40 0.22 16 30 H 0.05 0.58 7.64 -51.93 -0.40 0.18 16 31 H 0.13 1.68 5.19 -52.48 -0.27 1.41 16 32 H 0.15 0.91 8.06 -52.49 -0.42 0.48 16 33 H 0.06 0.42 8.14 -51.93 -0.42 -0.01 16 34 H 0.07 0.36 7.92 -51.93 -0.41 -0.05 16 35 H 0.08 0.75 7.42 -51.93 -0.39 0.37 16 36 H 0.06 0.48 6.74 -51.93 -0.35 0.13 16 37 H 0.08 0.42 7.80 -51.92 -0.40 0.02 16 38 H 0.07 0.54 5.82 -51.93 -0.30 0.24 16 39 H 0.13 1.55 8.06 -52.49 -0.42 1.13 16 40 H 0.27 7.72 8.31 -40.82 -0.34 7.38 16 LS Contribution 363.23 15.07 5.47 5.47 Total: -1.00 -34.66 363.23 -5.29 -39.96 By element: Atomic # 1 Polarization: -1.30 SS G_CDS: -4.17 Total: -5.47 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -0.73 Total: 1.28 kcal Atomic # 7 Polarization: -37.76 SS G_CDS: 0.86 Total: -36.89 kcal Atomic # 8 Polarization: -19.83 SS G_CDS: -0.40 Total: -20.22 kcal Atomic # 14 Polarization: 23.14 SS G_CDS: -4.86 Total: 18.28 kcal Atomic # 17 Polarization: -0.93 SS G_CDS: -1.48 Total: -2.41 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -34.66 -5.29 -39.96 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000059334307.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.574 kcal (2) G-P(sol) polarization free energy of solvation -34.664 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.910 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.293 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.957 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.617 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds