Wall clock time and date at job start Tue Mar 31 2020 05:45:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 O 1.21284 * 120.00329 * 2 1 4 4 N 1.34778 * 119.99581 * 180.02562 * 2 1 3 5 5 C 1.40056 * 119.99878 * 185.17728 * 4 2 1 6 6 C 1.39034 * 119.96288 * 34.50580 * 5 4 2 7 7 C 1.38119 * 120.26759 * 180.02562 * 6 5 4 8 8 C 1.38334 * 120.19868 * 359.97438 * 7 6 5 9 9 F 1.35091 * 120.04009 * 179.97438 * 8 7 6 10 10 C 1.39815 * 119.91891 * 359.97438 * 8 7 6 11 11 C 1.47706 * 120.13214 * 179.97438 * 10 8 7 12 12 O 1.21570 * 120.00098 * 26.44563 * 11 10 8 13 13 N 1.34779 * 119.99630 * 206.45550 * 11 10 8 14 14 C 1.46495 * 120.00306 * 1.00186 * 13 11 10 15 15 C 1.50699 * 109.47111 * 255.27178 * 14 13 11 16 16 H 1.08002 * 120.00372 * 359.97438 * 15 14 13 17 17 C 1.37878 * 120.00031 * 180.02562 * 15 14 13 18 18 N 1.31516 * 119.99784 * 0.02562 * 17 15 14 19 19 Si 1.86794 * 120.00121 * 180.02562 * 17 15 14 20 20 H 1.48500 * 109.47335 * 59.99887 * 19 17 15 21 21 H 1.48508 * 109.47384 * 180.02562 * 19 17 15 22 22 H 1.48504 * 109.47442 * 299.99823 * 19 17 15 23 23 C 1.46503 * 119.99818 * 181.00647 * 13 11 10 24 24 C 1.53001 * 109.47364 * 270.82223 * 23 13 11 25 25 C 1.53004 * 109.47057 * 54.86015 * 24 23 13 26 26 C 1.52992 * 109.47597 * 174.86623 * 24 23 13 27 27 C 1.53002 * 109.46763 * 294.86910 * 24 23 13 28 28 C 1.38485 * 119.96292 * 214.76000 * 5 4 2 29 29 H 1.08995 * 109.47183 * 240.00384 * 1 2 3 30 30 H 1.09002 * 109.46407 * 359.97438 * 1 2 3 31 31 H 1.08996 * 109.47231 * 119.99737 * 1 2 3 32 32 H 0.97005 * 120.00261 * 5.17861 * 4 2 1 33 33 H 1.07992 * 119.86625 * 0.02562 * 6 5 4 34 34 H 1.07997 * 119.90007 * 179.97438 * 7 6 5 35 35 H 1.08997 * 109.46880 * 15.27038 * 14 13 11 36 36 H 1.08996 * 109.47107 * 135.27258 * 14 13 11 37 37 H 0.97005 * 119.99701 * 180.02562 * 18 17 15 38 38 H 1.09003 * 109.46707 * 30.81964 * 23 13 11 39 39 H 1.08993 * 109.47132 * 150.81662 * 23 13 11 40 40 H 1.09004 * 109.46552 * 63.91373 * 25 24 23 41 41 H 1.08996 * 109.47092 * 183.90910 * 25 24 23 42 42 H 1.08998 * 109.47747 * 303.91716 * 25 24 23 43 43 H 1.08998 * 109.46956 * 59.99356 * 26 24 23 44 44 H 1.08992 * 109.47561 * 180.02562 * 26 24 23 45 45 H 1.09005 * 109.47085 * 300.00351 * 26 24 23 46 46 H 1.09002 * 109.47609 * 59.99807 * 27 24 23 47 47 H 1.09000 * 109.46912 * 180.02562 * 27 24 23 48 48 H 1.09000 * 109.46973 * 299.99531 * 27 24 23 49 49 H 1.08009 * 120.09791 * 0.02562 * 28 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 8 2.1135 1.0503 0.0000 4 7 2.1809 -1.1673 -0.0005 5 6 3.5771 -1.1699 0.1089 6 6 4.2144 -0.2107 0.8880 7 6 5.5910 -0.2070 0.9999 8 6 6.3455 -1.1587 0.3376 9 9 7.6918 -1.1519 0.4489 10 6 5.7129 -2.1277 -0.4471 11 6 6.5140 -3.1458 -1.1568 12 8 7.6042 -3.4693 -0.7272 13 7 6.0362 -3.7158 -2.2808 14 6 4.7321 -3.3099 -2.8107 15 6 3.7134 -4.3793 -2.5116 16 1 4.0079 -5.2723 -1.9802 17 6 2.4055 -4.2183 -2.9172 18 7 2.0472 -3.1316 -3.5655 19 14 1.1425 -5.5435 -2.5457 20 1 1.0417 -5.7334 -1.0764 21 1 -0.1791 -5.1327 -3.0842 22 1 1.5609 -6.8185 -3.1820 23 6 6.8209 -4.7415 -2.9725 24 6 7.7488 -4.0742 -3.9897 25 6 8.6044 -3.0198 -3.2845 26 6 8.6582 -5.1305 -4.6204 27 6 6.9114 -3.4046 -5.0812 28 6 4.3218 -2.1246 -0.5632 29 1 -0.3633 -0.5137 0.8900 30 1 -0.3632 1.0277 0.0005 31 1 -0.3633 -0.5138 -0.8900 32 1 1.6988 -2.0056 -0.0767 33 1 3.6306 0.5346 1.4077 34 1 6.0799 0.5411 1.6063 35 1 4.4251 -2.3746 -2.3429 36 1 4.8059 -3.1698 -3.8891 37 1 1.1269 -3.0182 -3.8505 38 1 7.4161 -5.2949 -2.2461 39 1 6.1486 -5.4267 -3.4887 40 1 9.2515 -3.5061 -2.5545 41 1 9.2154 -2.4965 -4.0200 42 1 7.9560 -2.3059 -2.7767 43 1 8.0485 -5.8816 -5.1227 44 1 9.3194 -4.6551 -5.3447 45 1 9.2547 -5.6076 -3.8427 46 1 6.2635 -2.6519 -4.6319 47 1 7.5724 -2.9295 -5.8061 48 1 6.3018 -4.1557 -5.5835 49 1 3.8275 -2.8672 -1.1721 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000069896609.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:45:13 Heat of formation + Delta-G solvation = -74.157852 kcal Electronic energy + Delta-G solvation = -33180.087857 eV Core-core repulsion = 28829.534905 eV Total energy + Delta-G solvation = -4350.552951 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 350.179 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -48.37118 -40.41052 -39.59625 -37.80025 -36.49751 -34.75085 -34.31029 -32.58048 -30.97692 -30.49324 -28.17490 -27.72657 -26.91187 -26.70681 -25.96849 -23.70449 -22.65152 -22.23977 -20.71694 -19.33326 -18.21647 -17.22841 -17.19209 -16.89862 -16.74442 -15.94121 -15.83688 -15.38258 -15.12893 -14.84760 -14.72012 -14.56614 -14.11533 -13.79331 -13.62648 -13.38669 -13.19574 -12.88906 -12.81316 -12.74596 -12.52497 -12.33721 -12.28964 -12.05447 -11.87848 -11.80169 -11.53615 -11.25402 -11.17956 -11.05779 -10.97279 -10.69111 -10.41304 -10.36488 -10.18366 -10.01643 -9.89007 -9.82580 -9.74788 -9.09202 -8.88785 -8.40471 -7.77153 -7.63179 -6.41220 -4.51866 1.20408 1.51523 2.70702 3.04982 3.12444 3.15665 3.24542 3.49253 3.80530 4.07924 4.20986 4.66503 4.81756 4.86593 5.06893 5.14986 5.23536 5.26433 5.28197 5.37712 5.40381 5.53656 5.69458 5.74087 5.90088 5.90805 5.91840 5.97075 6.14043 6.19374 6.23971 6.27713 6.32357 6.40711 6.45460 6.50873 6.55237 6.60881 6.61390 6.67288 6.80124 6.85119 6.89267 7.14987 7.25771 7.43822 7.53079 7.62096 7.80849 8.26549 8.28688 8.58900 8.93442 9.16167 10.61584 Molecular weight = 350.18amu Principal moments of inertia in cm(-1) A = 0.008379 B = 0.005409 C = 0.003670 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3340.995630 B = 5174.876098 C = 7627.614710 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.513 3.487 3 O -0.537 6.537 4 N -0.661 5.661 5 C 0.115 3.885 6 C -0.074 4.074 7 C -0.164 4.164 8 C 0.133 3.867 9 F -0.127 7.127 10 C -0.155 4.155 11 C 0.557 3.443 12 O -0.553 6.553 13 N -0.581 5.581 14 C 0.199 3.801 15 C -0.546 4.546 16 H 0.066 0.934 17 C 0.069 3.931 18 N -0.876 5.876 19 Si 0.891 3.109 20 H -0.273 1.273 21 H -0.284 1.284 22 H -0.274 1.274 23 C 0.133 3.867 24 C -0.084 4.084 25 C -0.129 4.129 26 C -0.135 4.135 27 C -0.141 4.141 28 C -0.090 4.090 29 H 0.088 0.912 30 H 0.092 0.908 31 H 0.093 0.907 32 H 0.416 0.584 33 H 0.138 0.862 34 H 0.136 0.864 35 H 0.066 0.934 36 H 0.044 0.956 37 H 0.269 0.731 38 H 0.071 0.929 39 H 0.081 0.919 40 H 0.059 0.941 41 H 0.039 0.961 42 H 0.052 0.948 43 H 0.053 0.947 44 H 0.051 0.949 45 H 0.053 0.947 46 H 0.066 0.934 47 H 0.043 0.957 48 H 0.054 0.946 49 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.571 1.808 3.494 3.975 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C 0.302 3.698 3 O -0.414 6.414 4 N -0.306 5.306 5 C 0.022 3.978 6 C -0.094 4.094 7 C -0.184 4.184 8 C 0.112 3.888 9 F -0.105 7.105 10 C -0.159 4.159 11 C 0.345 3.655 12 O -0.433 6.433 13 N -0.310 5.310 14 C 0.079 3.921 15 C -0.584 4.584 16 H 0.084 0.916 17 C -0.136 4.136 18 N -0.512 5.512 19 Si 0.718 3.282 20 H -0.198 1.198 21 H -0.209 1.209 22 H -0.199 1.199 23 C 0.010 3.990 24 C -0.085 4.085 25 C -0.186 4.186 26 C -0.193 4.193 27 C -0.199 4.199 28 C -0.109 4.109 29 H 0.107 0.893 30 H 0.111 0.889 31 H 0.112 0.888 32 H 0.252 0.748 33 H 0.156 0.844 34 H 0.154 0.846 35 H 0.083 0.917 36 H 0.062 0.938 37 H 0.079 0.921 38 H 0.089 0.911 39 H 0.100 0.900 40 H 0.078 0.922 41 H 0.058 0.942 42 H 0.071 0.929 43 H 0.072 0.928 44 H 0.070 0.930 45 H 0.072 0.928 46 H 0.085 0.915 47 H 0.062 0.938 48 H 0.074 0.926 49 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 0.222 2.491 3.601 4.384 hybrid contribution -0.936 -1.052 -0.066 1.410 sum -0.715 1.438 3.535 3.883 Atomic orbital electron populations 1.21912 0.91132 1.05537 1.04700 1.20899 0.90783 0.83143 0.75009 1.90708 1.70678 1.31306 1.48703 1.43490 1.04966 1.10057 1.72094 1.17652 0.83293 0.98696 0.98203 1.21025 0.93584 0.98210 0.96608 1.20788 0.93795 1.00225 1.03547 1.17690 0.77264 0.95926 0.97941 1.91516 1.28863 1.95849 1.94259 1.19869 0.94224 0.98883 1.02932 1.17899 0.85144 0.81510 0.80936 1.90726 1.21169 1.63945 1.67489 1.47954 1.20864 1.38186 1.24035 1.20490 0.77938 0.97036 0.96597 1.21452 0.93479 1.05312 1.38131 0.91590 1.24995 0.98426 0.95705 0.94478 1.69956 1.18900 1.25854 1.36499 0.86651 0.80238 0.82293 0.79026 1.19801 1.20949 1.19875 1.21364 0.93459 0.90001 0.94179 1.20950 0.95626 0.96115 0.95836 1.21822 0.99181 0.98370 0.99249 1.21781 0.99003 0.98323 1.00211 1.21986 0.99370 1.01013 0.97491 1.23227 0.92509 1.00719 0.94490 0.89299 0.88886 0.88785 0.74780 0.84404 0.84570 0.91738 0.93785 0.92127 0.91091 0.90031 0.92238 0.94163 0.92878 0.92752 0.92961 0.92821 0.91519 0.93757 0.92650 0.77006 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.72 10.32 36.01 0.37 -1.35 16 2 C 0.51 7.56 7.67 -10.98 -0.08 7.47 16 3 O -0.54 -9.75 14.84 5.55 0.08 -9.67 16 4 N -0.66 -10.07 5.34 -9.88 -0.05 -10.12 16 5 C 0.12 2.03 6.25 -83.71 -0.52 1.50 16 6 C -0.07 -1.22 8.64 -39.33 -0.34 -1.56 16 7 C -0.16 -2.68 10.01 -39.59 -0.40 -3.08 16 8 C 0.13 2.52 7.24 -38.96 -0.28 2.24 16 9 F -0.13 -2.51 15.88 2.25 0.04 -2.47 16 10 C -0.15 -3.13 5.58 -104.93 -0.59 -3.71 16 11 C 0.56 11.91 5.67 -12.39 -0.07 11.84 16 12 O -0.55 -12.63 13.44 5.30 0.07 -12.56 16 13 N -0.58 -11.84 2.02 -176.23 -0.36 -12.19 16 14 C 0.20 4.32 4.12 -5.20 -0.02 4.30 16 15 C -0.55 -12.38 7.25 -34.44 -0.25 -12.63 16 16 H 0.07 1.54 7.81 -52.49 -0.41 1.13 16 17 C 0.07 1.56 5.39 -17.82 -0.10 1.47 16 18 N -0.88 -20.63 13.29 55.43 0.74 -19.90 16 19 Si 0.89 17.73 29.54 -169.99 -5.02 12.71 16 20 H -0.27 -5.30 7.11 56.52 0.40 -4.90 16 21 H -0.28 -5.64 7.11 56.52 0.40 -5.24 16 22 H -0.27 -5.64 7.11 56.52 0.40 -5.24 16 23 C 0.13 2.44 4.51 -4.04 -0.02 2.42 16 24 C -0.08 -1.37 0.85 -154.51 -0.13 -1.50 16 25 C -0.13 -2.23 7.12 37.16 0.26 -1.97 16 26 C -0.14 -1.83 8.47 37.15 0.31 -1.51 16 27 C -0.14 -2.31 7.62 37.16 0.28 -2.03 16 28 C -0.09 -1.76 7.38 -38.98 -0.29 -2.05 16 29 H 0.09 0.66 8.14 -51.93 -0.42 0.24 16 30 H 0.09 0.86 8.12 -51.93 -0.42 0.44 16 31 H 0.09 0.88 8.14 -51.93 -0.42 0.45 16 32 H 0.42 5.64 8.82 -40.82 -0.36 5.28 16 33 H 0.14 2.17 6.49 -52.49 -0.34 1.83 16 34 H 0.14 1.83 8.06 -52.49 -0.42 1.41 16 35 H 0.07 1.48 3.99 -52.32 -0.21 1.27 16 36 H 0.04 1.02 5.54 -51.93 -0.29 0.73 16 37 H 0.27 6.08 8.31 -40.82 -0.34 5.74 16 38 H 0.07 1.32 7.46 -51.93 -0.39 0.94 16 39 H 0.08 1.49 7.90 -51.93 -0.41 1.08 16 40 H 0.06 1.07 7.60 -51.93 -0.39 0.68 16 41 H 0.04 0.62 8.14 -51.93 -0.42 0.20 16 42 H 0.05 1.04 5.85 -51.93 -0.30 0.74 16 43 H 0.05 0.69 8.14 -51.93 -0.42 0.26 16 44 H 0.05 0.65 8.14 -51.93 -0.42 0.22 16 45 H 0.05 0.70 8.14 -51.93 -0.42 0.28 16 46 H 0.07 1.23 5.66 -51.93 -0.29 0.94 16 47 H 0.04 0.65 8.14 -51.93 -0.42 0.22 16 48 H 0.05 0.89 8.14 -51.93 -0.42 0.47 16 49 H 0.21 4.46 3.13 -52.48 -0.16 4.30 16 LS Contribution 389.64 15.07 5.87 5.87 Total: -1.00 -27.60 389.64 -7.40 -35.01 By element: Atomic # 1 Polarization: 20.39 SS G_CDS: -6.92 Total: 13.47 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: -1.85 Total: -0.15 kcal Atomic # 7 Polarization: -42.54 SS G_CDS: 0.33 Total: -42.21 kcal Atomic # 8 Polarization: -22.38 SS G_CDS: 0.15 Total: -22.23 kcal Atomic # 9 Polarization: -2.51 SS G_CDS: 0.04 Total: -2.47 kcal Atomic # 14 Polarization: 17.73 SS G_CDS: -5.02 Total: 12.71 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -27.60 -7.40 -35.01 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000069896609.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.150 kcal (2) G-P(sol) polarization free energy of solvation -27.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.753 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.405 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.008 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.158 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds