Wall clock time and date at job start Tue Mar 31 2020 05:36:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 N 1.46497 * 109.47233 * 118.35990 * 3 2 1 5 5 C 1.33330 * 119.99887 * 271.97237 * 4 3 2 6 6 H 1.08003 * 119.99611 * 201.09463 * 5 4 3 7 7 C 1.46779 * 120.00171 * 20.82529 * 5 4 3 8 8 N 1.29319 * 120.00106 * 2.75250 * 7 5 4 9 9 Si 1.86797 * 120.00095 * 182.75581 * 7 5 4 10 10 H 1.48501 * 109.47397 * 359.97438 * 9 7 5 11 11 H 1.48500 * 109.47426 * 120.00226 * 9 7 5 12 12 H 1.48506 * 109.47287 * 239.99976 * 9 7 5 13 13 C 1.34775 * 120.00122 * 91.96995 * 4 3 2 14 14 O 1.21482 * 120.00061 * 174.67580 * 13 4 3 15 15 C 1.47650 * 119.99944 * 354.68086 * 13 4 3 16 16 C 1.39716 * 120.14023 * 299.82189 * 15 13 4 17 17 C 1.37855 * 119.85612 * 179.97438 * 16 15 13 18 18 C 1.38528 * 120.14179 * 359.97409 * 17 16 15 19 19 Br 1.89100 * 119.85476 * 180.02562 * 18 17 16 20 20 C 1.38481 * 120.28619 * 0.02562 * 18 17 16 21 21 C 1.37901 * 120.14457 * 359.73750 * 20 18 17 22 22 N 1.48016 * 120.07606 * 180.25460 * 21 20 18 23 23 O 1.31699 * 119.99791 * 353.47485 * 22 21 20 24 24 O 1.31698 * 120.00262 * 173.47460 * 22 21 20 25 25 H 1.09005 * 109.47423 * 358.36091 * 3 2 1 26 26 H 1.08998 * 109.47435 * 238.35936 * 3 2 1 27 27 H 0.97000 * 120.00037 * 179.97438 * 8 7 5 28 28 H 1.08004 * 120.06981 * 359.97438 * 16 15 13 29 29 H 1.07999 * 119.93125 * 179.97438 * 17 16 15 30 30 H 1.08003 * 119.92681 * 180.02562 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0960 0.6569 -1.2154 5 6 3.2811 -0.0536 -2.3283 6 1 3.9391 0.3152 -3.1013 7 6 2.5953 -1.3399 -2.5003 8 7 1.7706 -1.7589 -1.5967 9 14 2.9139 -2.3717 -4.0245 10 1 3.8911 -1.6746 -4.8989 11 1 3.4621 -3.6920 -3.6229 12 1 1.6412 -2.5685 -4.7641 13 6 3.3579 1.9790 -1.2087 14 8 3.8534 2.5051 -2.1851 15 6 3.0427 2.7879 -0.0144 16 6 1.7270 2.8733 0.4479 17 6 1.4394 3.6298 1.5639 18 6 2.4517 4.3041 2.2269 19 35 2.0481 5.3389 3.7573 20 6 3.7578 4.2236 1.7739 21 6 4.0595 3.4663 0.6616 22 7 5.4570 3.3768 0.1820 23 8 6.3923 4.1198 0.7366 24 8 5.7651 2.5541 -0.7992 25 1 2.9718 -1.0265 0.0294 26 1 2.9711 0.5399 0.8749 27 1 1.3171 -2.6088 -1.7106 28 1 0.9370 2.3477 -0.0680 29 1 0.4227 3.6969 1.9220 30 1 4.5425 4.7513 2.2955 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000095991083.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:36:38 Heat of formation + Delta-G solvation = 82.431627 kcal Electronic energy + Delta-G solvation = -23000.116078 eV Core-core repulsion = 19234.192278 eV Total energy + Delta-G solvation = -3765.923800 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 352.984 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -40.54680 -38.61545 -37.81357 -36.07418 -34.61462 -33.82579 -32.90233 -32.37660 -31.77335 -29.85106 -27.82177 -26.65980 -25.15098 -23.20517 -22.26696 -20.21537 -18.41878 -18.18618 -17.55891 -17.21942 -16.66217 -15.88903 -15.48683 -15.43194 -14.99777 -14.63716 -14.44388 -13.65374 -13.37428 -13.32142 -13.28152 -12.45719 -12.38340 -11.97602 -11.85901 -11.52273 -11.48574 -11.21673 -10.82103 -10.80926 -10.74410 -10.65794 -10.57968 -10.43025 -10.11145 -9.67015 -9.57426 -9.17982 -8.82702 -8.61044 -7.06129 -4.11403 -0.50482 0.51968 1.08375 1.20671 1.60807 2.77046 2.96689 3.01185 3.06603 3.39866 3.45388 3.71561 3.82005 4.19849 4.32234 4.44021 4.53884 4.72449 4.77521 4.86691 5.15049 5.31112 5.46372 5.63907 5.75100 5.83139 5.99326 6.25707 6.33034 6.75906 7.24724 7.46804 7.93707 8.47974 8.58087 8.76247 9.46882 9.93321 Molecular weight = 352.98amu Principal moments of inertia in cm(-1) A = 0.016771 B = 0.003936 C = 0.003310 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1669.128999 B = 7111.286754 C = 8458.049620 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.470 5.470 2 C 0.253 3.747 3 C 0.209 3.791 4 N -0.391 5.391 5 C -0.311 4.311 6 H 0.126 0.874 7 C 0.039 3.961 8 N -0.834 5.834 9 Si 0.944 3.056 10 H -0.256 1.256 11 H -0.273 1.273 12 H -0.276 1.276 13 C 0.455 3.545 14 O -0.539 6.539 15 C -0.018 4.018 16 C -0.094 4.094 17 C -0.044 4.044 18 C -0.102 4.102 19 Br -0.027 7.027 20 C -0.028 4.028 21 C 0.021 3.979 22 N -0.023 5.023 23 O -0.229 6.229 24 O -0.105 6.105 25 H 0.136 0.864 26 H 0.079 0.921 27 H 0.290 0.710 28 H 0.154 0.846 29 H 0.152 0.848 30 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.967 6.556 11.495 13.379 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.151 5.151 2 C -0.064 4.064 3 C 0.082 3.918 4 N -0.107 5.107 5 C -0.440 4.440 6 H 0.143 0.857 7 C -0.174 4.174 8 N -0.468 5.468 9 Si 0.769 3.231 10 H -0.180 1.180 11 H -0.199 1.199 12 H -0.202 1.202 13 C 0.245 3.755 14 O -0.422 6.422 15 C -0.025 4.025 16 C -0.114 4.114 17 C -0.064 4.064 18 C -0.183 4.183 19 Br 0.058 6.942 20 C -0.049 4.049 21 C -0.068 4.068 22 N 0.448 4.552 23 O -0.402 6.402 24 O -0.309 6.309 25 H 0.154 0.846 26 H 0.096 0.904 27 H 0.103 0.897 28 H 0.172 0.828 29 H 0.169 0.831 30 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -4.144 7.164 11.906 14.500 hybrid contribution 0.853 -0.892 -0.976 1.574 sum -3.291 6.272 10.930 13.024 Atomic orbital electron populations 1.80942 1.13085 1.11335 1.09688 1.28871 0.94994 0.90778 0.91769 1.18982 0.82396 1.02406 0.88028 1.42494 1.52917 1.05590 1.09662 1.21043 1.25556 1.00798 0.96589 0.85658 1.27097 0.93571 0.97625 0.99097 1.68605 1.22564 1.21300 1.34328 0.85528 0.79148 0.78612 0.79834 1.17966 1.19874 1.20158 1.17283 0.89196 0.81979 0.87004 1.90701 1.47609 1.69847 1.33996 1.20470 0.92320 0.95996 0.93744 1.21539 0.95199 0.98760 0.95931 1.21420 0.99473 0.92305 0.93193 1.21596 0.94658 1.03962 0.98052 1.96765 1.94544 1.68807 1.34064 1.20814 0.96580 0.94529 0.92955 1.20117 0.80129 1.07564 0.99039 1.50132 1.03135 1.00954 1.01003 1.96204 1.41138 1.42483 1.60371 1.96409 1.88657 1.30276 1.15509 0.84647 0.90350 0.89684 0.82836 0.83073 0.82108 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 50. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -9.61 18.31 42.15 0.77 -8.84 16 2 C 0.25 4.90 10.33 -20.76 -0.21 4.69 16 3 C 0.21 3.84 4.78 -6.83 -0.03 3.81 16 4 N -0.39 -8.51 2.49 -117.52 -0.29 -8.81 16 5 C -0.31 -7.26 9.56 -13.45 -0.13 -7.39 16 6 H 0.13 3.14 7.36 -52.48 -0.39 2.75 16 7 C 0.04 0.84 5.44 -15.16 -0.08 0.76 16 8 N -0.83 -17.90 8.42 56.00 0.47 -17.43 16 9 Si 0.94 17.55 29.65 -169.99 -5.04 12.51 16 10 H -0.26 -4.86 7.11 56.52 0.40 -4.46 16 11 H -0.27 -4.95 7.11 56.52 0.40 -4.54 16 12 H -0.28 -5.24 7.11 56.52 0.40 -4.84 16 13 C 0.46 10.14 5.34 -12.42 -0.07 10.08 16 14 O -0.54 -14.03 14.72 -18.18 -0.27 -14.29 16 15 C -0.02 -0.34 4.26 -104.96 -0.45 -0.78 16 16 C -0.09 -1.42 8.02 -39.17 -0.31 -1.74 16 17 C -0.04 -0.53 9.77 -39.61 -0.39 -0.91 16 18 C -0.10 -1.22 6.23 -39.38 -0.25 -1.47 16 19 Br -0.03 -0.27 33.69 -68.01 -2.29 -2.56 16 20 C -0.03 -0.38 9.31 -39.62 -0.37 -0.75 16 21 C 0.02 0.37 6.90 -79.53 -0.55 -0.18 16 22 N -0.02 -0.48 4.98 34.16 0.17 -0.31 16 23 O -0.23 -4.58 19.17 -31.57 -0.61 -5.18 16 24 O -0.11 -2.46 15.81 -39.67 -0.63 -3.08 16 25 H 0.14 2.50 6.64 -51.93 -0.34 2.15 16 26 H 0.08 1.21 6.75 -51.93 -0.35 0.86 16 27 H 0.29 5.96 8.26 -40.82 -0.34 5.62 16 28 H 0.15 2.48 6.08 -52.48 -0.32 2.16 16 29 H 0.15 1.42 8.06 -52.49 -0.42 1.00 16 30 H 0.16 2.00 7.59 -52.48 -0.40 1.61 16 LS Contribution 299.24 15.07 4.51 4.51 Total: -1.00 -27.67 299.24 -7.39 -35.06 By element: Atomic # 1 Polarization: 3.66 SS G_CDS: -1.35 Total: 2.30 kcal Atomic # 6 Polarization: 8.94 SS G_CDS: -2.84 Total: 6.11 kcal Atomic # 7 Polarization: -36.50 SS G_CDS: 1.12 Total: -35.38 kcal Atomic # 8 Polarization: -21.06 SS G_CDS: -1.50 Total: -22.56 kcal Atomic # 14 Polarization: 17.55 SS G_CDS: -5.04 Total: 12.51 kcal Atomic # 35 Polarization: -0.27 SS G_CDS: -2.29 Total: -2.56 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -27.67 -7.39 -35.06 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000095991083.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 117.493 kcal (2) G-P(sol) polarization free energy of solvation -27.671 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 89.822 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.390 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.061 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.432 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds