Wall clock time and date at job start Tue Mar 31 2020 05:14:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.35396 * 126.51695 * 2 1 4 4 N 1.30828 * 108.78667 * 179.97438 * 3 2 1 5 5 C 1.33370 * 109.13685 * 359.97438 * 4 3 2 6 6 C 1.35250 * 107.94210 * 0.07245 * 5 4 3 7 7 C 1.50696 * 123.49278 * 179.87793 * 6 5 4 8 8 C 1.53548 * 107.83391 * 344.25016 * 7 6 5 9 9 N 1.46948 * 109.58142 * 48.91667 * 8 7 6 10 10 C 1.46901 * 111.00082 * 164.39304 * 9 8 7 11 11 C 1.53007 * 109.46971 * 190.65894 * 10 9 8 12 12 H 1.09000 * 109.46897 * 305.00533 * 11 10 9 13 13 O 1.42894 * 109.46721 * 65.00095 * 11 10 9 14 14 C 1.52998 * 109.46793 * 184.99942 * 11 10 9 15 15 O 1.42911 * 109.46670 * 175.00115 * 14 11 10 16 16 C 1.35675 * 116.99567 * 180.02562 * 15 14 11 17 17 C 1.39314 * 119.81564 * 180.02562 * 16 15 14 18 18 C 1.36436 * 120.18679 * 180.27303 * 17 16 15 19 19 C 1.40839 * 119.80658 * 359.49986 * 18 17 16 20 20 C 1.41214 * 120.17523 * 180.22651 * 19 18 17 21 21 H 1.07998 * 120.00106 * 205.15988 * 20 19 18 22 22 C 1.39900 * 119.99897 * 25.16786 * 20 19 18 23 23 N 1.30877 * 119.99964 * 17.95935 * 22 20 19 24 24 Si 1.86804 * 119.99799 * 197.96847 * 22 20 19 25 25 H 1.48497 * 109.47499 * 94.50679 * 24 22 20 26 26 H 1.48498 * 109.46920 * 214.51003 * 24 22 20 27 27 H 1.48503 * 109.46747 * 334.50589 * 24 22 20 28 28 C 1.40833 * 119.64336 * 0.49469 * 19 18 17 29 29 C 1.36433 * 119.80947 * 359.75507 * 28 19 18 30 30 C 1.47279 * 111.51184 * 288.72017 * 9 8 7 31 31 H 1.08997 * 109.46964 * 269.97403 * 1 2 3 32 32 H 1.08999 * 109.47025 * 29.97203 * 1 2 3 33 33 H 1.08996 * 109.46539 * 149.96959 * 1 2 3 34 34 H 1.08002 * 125.61101 * 359.97438 * 3 2 1 35 35 H 1.09007 * 109.78505 * 103.85101 * 7 6 5 36 36 H 1.09000 * 109.78880 * 224.62047 * 7 6 5 37 37 H 1.08996 * 109.46055 * 288.87622 * 8 7 6 38 38 H 1.09007 * 109.45003 * 168.94537 * 8 7 6 39 39 H 1.09000 * 109.46932 * 70.66137 * 10 9 8 40 40 H 1.08990 * 109.47216 * 310.65976 * 10 9 8 41 41 H 0.96704 * 114.00200 * 60.00425 * 13 11 10 42 42 H 1.08998 * 109.47240 * 55.00993 * 14 11 10 43 43 H 1.08997 * 109.47367 * 294.99644 * 14 11 10 44 44 H 1.08005 * 119.90322 * 359.97438 * 17 16 15 45 45 H 1.07997 * 120.09477 * 179.72057 * 18 17 16 46 46 H 0.97003 * 119.99637 * 180.02562 * 23 22 20 47 47 H 1.08001 * 120.08913 * 179.73279 * 28 19 18 48 48 H 1.08003 * 119.90178 * 179.97438 * 29 28 19 49 49 H 1.08991 * 109.70140 * 171.09581 * 30 9 8 50 50 H 1.09008 * 109.69651 * 291.65482 * 30 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2707 1.0881 0.0000 4 7 3.5169 0.6897 0.0006 5 6 3.5496 -0.6436 0.0015 6 6 2.2735 -1.0917 -0.0001 7 6 1.9052 -2.5529 -0.0024 8 6 3.1548 -3.3522 -0.3992 9 7 4.3012 -2.9047 0.4038 10 6 5.4057 -3.8703 0.3284 11 6 6.4665 -3.5142 1.3720 12 1 6.7824 -2.4805 1.2309 13 8 5.9170 -3.6698 2.6819 14 6 7.6720 -4.4425 1.2110 15 8 8.7089 -4.0363 2.1067 16 6 9.8562 -4.7603 2.0895 17 6 10.9053 -4.4161 2.9391 18 6 12.0644 -5.1355 2.9242 19 6 12.1946 -6.2354 2.0542 20 6 13.3891 -6.9884 2.0358 21 1 13.6668 -7.5388 1.1491 22 6 14.2126 -7.0215 3.1662 23 7 13.7370 -6.6668 4.3328 24 14 15.9909 -7.5718 3.0105 25 1 16.8633 -6.3831 2.8340 26 1 16.3923 -8.3024 4.2394 27 1 16.1306 -8.4674 1.8342 28 6 11.1292 -6.5767 1.1987 29 6 9.9788 -5.8437 1.2224 30 6 4.7481 -1.5594 0.0043 31 1 -0.3633 -0.0005 1.0276 32 1 -0.3633 0.8902 -0.5134 33 1 -0.3632 -0.8897 -0.5143 34 1 1.9393 2.1160 -0.0004 35 1 1.5762 -2.8521 0.9929 36 1 1.1077 -2.7314 -0.7237 37 1 3.3675 -3.1924 -1.4562 38 1 2.9789 -4.4131 -0.2211 39 1 5.8496 -3.8377 -0.6666 40 1 5.0258 -4.8729 0.5241 41 1 5.6143 -4.5671 2.8774 42 1 8.0368 -4.3898 0.1853 43 1 7.3753 -5.4662 1.4392 44 1 10.8025 -3.5743 3.6079 45 1 12.8784 -4.8646 3.5802 46 1 14.3082 -6.6894 5.1166 47 1 11.2229 -7.4161 0.5255 48 1 9.1610 -6.1039 0.5667 49 1 5.4892 -1.1925 0.7144 50 1 5.1838 -1.5983 -0.9942 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000069653146.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:14:37 Heat of formation + Delta-G solvation = 6.456017 kcal Electronic energy + Delta-G solvation = -30533.604940 eV Core-core repulsion = 26334.123452 eV Total energy + Delta-G solvation = -4199.481488 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 357.184 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.55766 -39.24329 -38.41116 -36.85383 -35.83891 -34.59560 -33.27959 -32.68227 -30.36719 -29.82153 -29.40850 -28.90255 -27.67243 -26.01319 -24.73851 -24.19581 -22.70827 -21.61894 -21.14723 -20.61115 -20.52194 -19.25183 -17.40266 -17.29853 -17.06824 -16.49162 -16.40449 -16.04342 -15.52141 -15.37397 -15.16450 -14.85603 -14.28661 -14.19300 -14.07132 -13.89669 -13.86216 -13.50128 -13.36837 -13.16609 -12.92362 -12.78411 -12.37251 -12.23826 -12.11198 -11.95821 -11.80838 -11.68963 -11.62282 -11.31433 -11.12976 -10.91346 -10.74268 -10.55872 -10.09454 -9.93896 -9.87949 -9.82507 -9.77481 -9.29408 -9.00175 -8.59549 -8.30900 -7.61177 -6.99448 -6.69269 -4.22640 1.73258 2.41687 2.80570 2.87072 2.98092 3.10907 3.14437 3.23934 3.31495 3.97396 4.00542 4.21078 4.23751 4.36508 4.50316 4.55389 4.58955 4.65063 4.82344 4.83543 4.86975 4.94969 5.07472 5.12372 5.20047 5.25175 5.32790 5.35277 5.44033 5.46284 5.60847 5.65560 5.70537 5.71099 6.03672 6.08543 6.08924 6.26312 6.44456 6.69534 6.74880 6.79049 6.92815 7.00705 7.14343 7.21571 7.49470 7.58971 7.81884 7.84168 7.86053 8.03851 8.23489 8.48906 8.68806 8.92917 9.02003 10.25412 Molecular weight = 357.18amu Principal moments of inertia in cm(-1) A = 0.033614 B = 0.001505 C = 0.001482 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 832.798243 B =18599.238026 C =18892.516826 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.073 3.927 2 N -0.454 5.454 3 C 0.169 3.831 4 N -0.479 5.479 5 C 0.007 3.993 6 C -0.022 4.022 7 C -0.033 4.033 8 C 0.061 3.939 9 N -0.527 5.527 10 C 0.030 3.970 11 C 0.115 3.885 12 H 0.106 0.894 13 O -0.538 6.538 14 C 0.038 3.962 15 O -0.316 6.316 16 C -0.007 4.007 17 C -0.119 4.119 18 C -0.132 4.132 19 C 0.088 3.912 20 C -0.465 4.465 21 H 0.076 0.924 22 C 0.075 3.925 23 N -0.799 5.799 24 Si 0.907 3.093 25 H -0.269 1.269 26 H -0.278 1.278 27 H -0.263 1.263 28 C -0.198 4.198 29 C -0.169 4.169 30 C 0.140 3.860 31 H 0.078 0.922 32 H 0.088 0.912 33 H 0.084 0.916 34 H 0.206 0.794 35 H 0.085 0.915 36 H 0.074 0.926 37 H 0.040 0.960 38 H 0.085 0.915 39 H 0.049 0.951 40 H 0.085 0.915 41 H 0.369 0.631 42 H 0.056 0.944 43 H 0.053 0.947 44 H 0.098 0.902 45 H 0.124 0.876 46 H 0.280 0.720 47 H 0.094 0.906 48 H 0.092 0.908 49 H 0.097 0.903 50 H 0.049 0.951 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.857 8.591 -9.343 29.705 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.136 5.136 3 C -0.111 4.111 4 N -0.196 5.196 5 C -0.124 4.124 6 C -0.138 4.138 7 C -0.072 4.072 8 C -0.068 4.068 9 N -0.252 5.252 10 C -0.098 4.098 11 C 0.055 3.945 12 H 0.123 0.877 13 O -0.342 6.342 14 C -0.039 4.039 15 O -0.232 6.232 16 C -0.050 4.050 17 C -0.138 4.138 18 C -0.152 4.152 19 C 0.085 3.915 20 C -0.495 4.495 21 H 0.094 0.906 22 C -0.142 4.142 23 N -0.425 5.425 24 Si 0.732 3.268 25 H -0.194 1.194 26 H -0.204 1.204 27 H -0.187 1.187 28 C -0.218 4.218 29 C -0.188 4.188 30 C 0.011 3.989 31 H 0.096 0.904 32 H 0.106 0.894 33 H 0.102 0.898 34 H 0.222 0.778 35 H 0.103 0.897 36 H 0.092 0.908 37 H 0.058 0.942 38 H 0.103 0.897 39 H 0.067 0.933 40 H 0.103 0.897 41 H 0.216 0.784 42 H 0.074 0.926 43 H 0.071 0.929 44 H 0.116 0.884 45 H 0.142 0.858 46 H 0.091 0.909 47 H 0.112 0.888 48 H 0.110 0.890 49 H 0.115 0.885 50 H 0.067 0.933 Dipole moment (debyes) X Y Z Total from point charges -26.316 9.951 -8.457 29.378 hybrid contribution 0.035 -1.486 -1.071 1.831 sum -26.280 8.465 -9.527 29.208 Atomic orbital electron populations 1.22029 0.76623 1.04582 1.03727 1.44910 1.07416 1.06732 1.54561 1.25028 0.85034 0.93311 1.07742 1.69846 1.19483 1.11343 1.18957 1.20288 0.93285 0.90440 1.08394 1.20866 0.91088 0.90289 1.11521 1.20131 0.97601 0.86921 1.02516 1.22085 0.90253 0.99119 0.95297 1.61733 1.06806 1.01608 1.55006 1.22743 0.92129 0.96225 0.98746 1.21881 0.89023 1.00647 0.82988 0.87650 1.86662 1.82098 1.34376 1.31039 1.23121 0.88767 0.97913 0.94127 1.85900 1.22876 1.54697 1.59698 1.18627 0.87122 0.96645 1.02653 1.19850 0.92978 1.01274 0.99690 1.20961 0.96572 0.95396 1.02236 1.17598 0.91994 0.91036 0.90840 1.19466 1.04044 1.26771 0.99221 0.90571 1.25872 1.00220 0.93497 0.94568 1.69840 1.36677 1.36640 0.99332 0.86325 0.82357 0.79427 0.78724 1.19397 1.20380 1.18697 1.20552 0.93890 1.01642 1.05707 1.20390 0.98862 0.98177 1.01338 1.20362 0.93085 0.85708 0.99700 0.90374 0.89359 0.89751 0.77778 0.89679 0.90785 0.94210 0.89651 0.93316 0.89689 0.78450 0.92570 0.92892 0.88399 0.85787 0.90943 0.88807 0.88956 0.88499 0.93316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.24 11.08 59.85 0.66 0.90 16 2 N -0.45 -3.67 3.14 -121.30 -0.38 -4.05 16 3 C 0.17 1.59 12.58 -89.78 -1.13 0.46 16 4 N -0.48 -6.33 11.24 -10.71 -0.12 -6.45 16 5 C 0.01 0.08 7.09 -82.92 -0.59 -0.50 16 6 C -0.02 -0.22 6.80 -81.88 -0.56 -0.78 16 7 C -0.03 -0.24 6.26 -27.60 -0.17 -0.41 16 8 C 0.06 0.47 5.53 -3.51 -0.02 0.45 16 9 N -0.53 -5.40 4.56 -235.26 -1.07 -6.48 16 10 C 0.03 0.29 4.60 -3.82 -0.02 0.27 16 11 C 0.11 1.49 3.20 -26.73 -0.09 1.40 16 12 H 0.11 1.50 6.44 -51.93 -0.33 1.17 16 13 O -0.54 -7.73 13.25 -40.08 -0.53 -8.26 16 14 C 0.04 0.58 4.37 37.16 0.16 0.75 16 15 O -0.32 -6.60 10.09 -23.58 -0.24 -6.84 16 16 C -0.01 -0.17 6.71 -38.78 -0.26 -0.43 16 17 C -0.12 -2.96 9.92 -39.83 -0.40 -3.35 16 18 C -0.13 -3.51 8.64 -39.25 -0.34 -3.85 16 19 C 0.09 2.37 5.57 -106.80 -0.59 1.77 16 20 C -0.46 -12.46 9.04 -37.83 -0.34 -12.80 16 21 H 0.08 1.96 7.91 -52.49 -0.42 1.55 16 22 C 0.08 1.91 5.13 -17.34 -0.09 1.82 16 23 N -0.80 -20.96 11.00 55.55 0.61 -20.35 16 24 Si 0.91 18.89 29.60 -169.99 -5.03 13.86 16 25 H -0.27 -5.53 7.11 56.52 0.40 -5.13 16 26 H -0.28 -5.68 7.11 56.52 0.40 -5.28 16 27 H -0.26 -5.40 7.11 56.52 0.40 -5.00 16 28 C -0.20 -4.90 9.74 -39.25 -0.38 -5.29 16 29 C -0.17 -3.83 8.96 -39.83 -0.36 -4.19 16 30 C 0.14 1.65 5.47 -4.70 -0.03 1.63 16 31 H 0.08 0.20 8.14 -51.93 -0.42 -0.22 16 32 H 0.09 0.11 8.14 -51.93 -0.42 -0.31 16 33 H 0.08 0.18 7.91 -51.93 -0.41 -0.23 16 34 H 0.21 1.10 8.06 -52.49 -0.42 0.67 16 35 H 0.08 0.62 8.14 -51.92 -0.42 0.19 16 36 H 0.07 0.37 8.01 -51.93 -0.42 -0.05 16 37 H 0.04 0.31 8.07 -51.93 -0.42 -0.11 16 38 H 0.09 0.51 7.81 -51.93 -0.41 0.11 16 39 H 0.05 0.44 8.09 -51.93 -0.42 0.02 16 40 H 0.08 0.68 7.85 -51.93 -0.41 0.27 16 41 H 0.37 4.00 9.05 45.56 0.41 4.41 16 42 H 0.06 0.82 7.64 -51.93 -0.40 0.42 16 43 H 0.05 0.76 7.65 -51.93 -0.40 0.37 16 44 H 0.10 2.27 8.06 -52.48 -0.42 1.85 16 45 H 0.12 3.37 6.21 -52.49 -0.33 3.04 16 46 H 0.28 6.68 8.30 -40.82 -0.34 6.34 16 47 H 0.09 2.16 8.06 -52.49 -0.42 1.74 16 48 H 0.09 1.79 6.27 -52.48 -0.33 1.46 16 49 H 0.10 1.29 6.61 -51.93 -0.34 0.95 16 50 H 0.05 0.55 8.11 -51.92 -0.42 0.13 16 LS Contribution 405.40 15.07 6.11 6.11 Total: -1.00 -34.38 405.40 -11.88 -46.27 By element: Atomic # 1 Polarization: 15.03 SS G_CDS: -6.70 Total: 8.33 kcal Atomic # 6 Polarization: -17.62 SS G_CDS: -4.53 Total: -22.15 kcal Atomic # 7 Polarization: -36.35 SS G_CDS: -0.96 Total: -37.32 kcal Atomic # 8 Polarization: -14.33 SS G_CDS: -0.77 Total: -15.10 kcal Atomic # 14 Polarization: 18.89 SS G_CDS: -5.03 Total: 13.86 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -34.38 -11.88 -46.27 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000069653146.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.722 kcal (2) G-P(sol) polarization free energy of solvation -34.384 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.339 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.883 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -46.266 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.456 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds