Wall clock time and date at job start Tue Mar 31 2020 04:58:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.52999 * 109.47101 * 2 1 4 4 H 1.08997 * 109.47182 * 304.99714 * 3 2 1 5 5 O 1.42897 * 109.47137 * 65.00525 * 3 2 1 6 6 C 1.35904 * 116.99610 * 261.87734 * 5 3 2 7 7 C 1.38766 * 120.04973 * 356.89368 * 6 5 3 8 8 C 1.38121 * 119.97074 * 180.02562 * 7 6 5 9 9 C 1.38262 * 120.07217 * 0.02562 * 8 7 6 10 10 C 1.38369 * 120.09475 * 359.95427 * 9 8 7 11 11 Cl 1.73605 * 119.98208 * 179.74325 * 10 9 8 12 12 C 1.38275 * 120.03133 * 0.02562 * 10 9 8 13 13 C 1.50709 * 109.46938 * 185.00024 * 3 2 1 14 14 O 1.21279 * 119.99840 * 244.99857 * 13 3 2 15 15 N 1.34773 * 119.99941 * 65.00248 * 13 3 2 16 16 C 1.39242 * 120.00105 * 185.50112 * 15 13 3 17 17 C 1.39472 * 119.83590 * 213.24126 * 16 15 13 18 18 C 1.36373 * 120.17180 * 179.75683 * 17 16 15 19 19 C 1.40867 * 119.82523 * 0.51875 * 18 17 16 20 20 C 1.41151 * 120.16562 * 179.71611 * 19 18 17 21 21 H 1.08001 * 119.99907 * 158.62488 * 20 19 18 22 22 C 1.39909 * 119.99880 * 338.62374 * 20 19 18 23 23 N 1.30865 * 120.00099 * 332.54250 * 22 20 19 24 24 Si 1.86803 * 119.99748 * 152.53968 * 22 20 19 25 25 H 1.48498 * 109.47253 * 94.98881 * 24 22 20 26 26 H 1.48497 * 109.47011 * 214.99022 * 24 22 20 27 27 H 1.48498 * 109.47200 * 334.98790 * 24 22 20 28 28 C 1.40871 * 119.67462 * 359.73840 * 19 18 17 29 29 C 1.36384 * 119.82748 * 359.97438 * 28 19 18 30 30 H 1.09000 * 109.47093 * 60.00145 * 1 2 3 31 31 H 1.09001 * 109.46987 * 180.02562 * 1 2 3 32 32 H 1.09000 * 109.46847 * 299.99923 * 1 2 3 33 33 H 1.08999 * 109.47351 * 239.99927 * 2 1 3 34 34 H 1.09005 * 109.47675 * 120.00233 * 2 1 3 35 35 H 1.08008 * 120.01053 * 359.97438 * 7 6 5 36 36 H 1.08004 * 119.96911 * 179.97438 * 8 7 6 37 37 H 1.08002 * 119.95410 * 179.97438 * 9 8 7 38 38 H 1.08000 * 120.03683 * 180.02562 * 12 10 9 39 39 H 0.96999 * 119.99939 * 5.49797 * 15 13 3 40 40 H 1.08009 * 119.91481 * 0.02562 * 17 16 15 41 41 H 1.08001 * 120.08893 * 180.25141 * 18 17 16 42 42 H 0.96997 * 119.99990 * 180.02562 * 23 22 20 43 43 H 1.07999 * 120.08907 * 179.97438 * 28 19 18 44 44 H 1.07996 * 119.91780 * 179.97438 * 29 28 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 1 1.6054 1.9815 -0.8418 5 8 1.6620 2.0813 1.2211 6 6 0.5509 2.8634 1.1900 7 6 -0.1240 3.0645 -0.0057 8 6 -1.2527 3.8600 -0.0355 9 6 -1.7106 4.4567 1.1247 10 6 -1.0401 4.2577 2.3186 11 17 -1.6137 5.0137 3.7722 12 6 0.0901 3.4618 2.3532 13 6 3.5419 1.4443 -0.1238 14 8 4.2250 1.8610 0.7875 15 7 4.1260 0.9828 -1.2474 16 6 5.5126 0.8771 -1.3183 17 6 6.1632 1.0875 -2.5339 18 6 7.5213 0.9907 -2.6102 19 6 8.2663 0.6664 -1.4595 20 6 9.6718 0.5584 -1.5315 21 1 10.2675 0.6554 -0.6359 22 6 10.2933 0.3258 -2.7633 23 7 9.6500 -0.3060 -3.7117 24 14 12.0413 0.9171 -3.0539 25 1 12.9916 -0.1873 -2.7667 26 1 12.1908 1.3435 -4.4684 27 1 12.3310 2.0650 -2.1576 28 6 7.6016 0.4500 -0.2364 29 6 6.2433 0.5562 -0.1744 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3633 0.5138 0.8900 33 1 1.8933 -0.5138 -0.8900 34 1 1.8934 -0.5139 0.8900 35 1 0.2337 2.5998 -0.9127 36 1 -1.7778 4.0169 -0.9662 37 1 -2.5932 5.0787 1.0991 38 1 0.6133 3.3061 3.2851 39 1 3.5804 0.7242 -2.0065 40 1 5.5902 1.3321 -3.4163 41 1 8.0241 1.1578 -3.5513 42 1 10.0810 -0.4676 -4.5655 43 1 8.1661 0.2007 0.6499 44 1 5.7323 0.3902 0.7623 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000030852341.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 04:58:14 Heat of formation + Delta-G solvation = -31.260911 kcal Electronic energy + Delta-G solvation = -28227.290580 eV Core-core repulsion = 24135.612309 eV Total energy + Delta-G solvation = -4091.678271 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 359.108 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -40.98483 -39.56535 -38.08481 -37.12407 -36.52545 -34.60355 -34.01733 -32.93917 -31.16191 -30.35464 -29.65539 -29.24046 -27.61273 -24.88066 -23.52756 -22.89659 -22.27814 -21.44444 -20.71520 -19.65326 -18.92206 -17.60940 -17.33108 -16.50417 -16.22316 -16.03619 -16.01901 -15.25548 -15.05415 -14.71801 -14.29552 -14.13712 -14.00790 -13.93396 -13.68468 -13.11658 -12.96364 -12.76263 -12.56620 -12.28079 -12.18477 -12.11918 -11.95821 -11.84147 -11.70513 -11.50349 -11.27638 -11.16827 -11.16180 -10.99180 -10.77897 -10.58422 -10.17397 -9.78657 -9.51085 -9.21654 -9.15852 -8.77538 -8.49916 -7.60373 -7.14474 -6.91037 -4.32302 0.77428 1.01591 1.70702 2.42466 2.70233 2.88963 3.02511 3.04875 3.09088 3.26797 3.30674 3.74089 3.86521 4.30339 4.40612 4.47292 4.55564 4.68297 4.74740 4.78100 4.88977 5.01409 5.08744 5.16805 5.36615 5.46650 5.63955 5.64639 5.75306 5.82605 5.90391 5.96940 5.97633 6.12671 6.18145 6.35680 6.68810 6.84038 6.96162 7.05882 7.09806 7.22842 7.51583 7.62086 7.82408 7.97188 8.19135 8.20931 8.50493 8.64235 8.80450 8.93246 10.01579 Molecular weight = 359.11amu Principal moments of inertia in cm(-1) A = 0.021447 B = 0.001796 C = 0.001740 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1305.200484 B =15586.026997 C =16083.844683 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.138 4.138 3 C 0.065 3.935 4 H 0.101 0.899 5 O -0.275 6.275 6 C 0.153 3.847 7 C -0.211 4.211 8 C -0.064 4.064 9 C -0.154 4.154 10 C 0.006 3.994 11 Cl -0.065 7.065 12 C -0.147 4.147 13 C 0.496 3.504 14 O -0.508 6.508 15 N -0.642 5.642 16 C -0.019 4.019 17 C -0.104 4.104 18 C -0.165 4.165 19 C 0.110 3.890 20 C -0.459 4.459 21 H 0.081 0.919 22 C 0.082 3.918 23 N -0.776 5.776 24 Si 0.901 3.099 25 H -0.269 1.269 26 H -0.274 1.274 27 H -0.258 1.258 28 C -0.221 4.221 29 C -0.069 4.069 30 H 0.057 0.943 31 H 0.063 0.937 32 H 0.059 0.941 33 H 0.088 0.912 34 H 0.083 0.917 35 H 0.138 0.862 36 H 0.135 0.865 37 H 0.134 0.866 38 H 0.143 0.857 39 H 0.394 0.606 40 H 0.090 0.910 41 H 0.114 0.886 42 H 0.283 0.717 43 H 0.095 0.905 44 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.311 4.111 2.560 22.831 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.176 4.176 3 C 0.005 3.995 4 H 0.119 0.881 5 O -0.186 6.186 6 C 0.107 3.893 7 C -0.230 4.230 8 C -0.082 4.082 9 C -0.173 4.173 10 C -0.021 4.021 11 Cl -0.036 7.036 12 C -0.166 4.166 13 C 0.280 3.720 14 O -0.383 6.383 15 N -0.286 5.286 16 C -0.111 4.111 17 C -0.124 4.124 18 C -0.185 4.185 19 C 0.107 3.893 20 C -0.487 4.487 21 H 0.099 0.901 22 C -0.138 4.138 23 N -0.400 5.400 24 Si 0.725 3.275 25 H -0.195 1.195 26 H -0.199 1.199 27 H -0.182 1.182 28 C -0.241 4.241 29 C -0.089 4.089 30 H 0.076 0.924 31 H 0.082 0.918 32 H 0.078 0.922 33 H 0.106 0.894 34 H 0.102 0.898 35 H 0.156 0.844 36 H 0.153 0.847 37 H 0.151 0.849 38 H 0.161 0.839 39 H 0.228 0.772 40 H 0.108 0.892 41 H 0.132 0.868 42 H 0.094 0.906 43 H 0.113 0.887 44 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -21.724 4.314 3.306 22.394 hybrid contribution 0.407 0.114 -0.753 0.863 sum -21.317 4.428 2.553 21.921 Atomic orbital electron populations 1.21882 0.94552 1.02590 1.02189 1.21986 0.97081 0.93873 1.04660 1.22488 0.94179 0.95141 0.87688 0.88116 1.86255 1.40116 1.58897 1.33358 1.18839 0.86567 0.90520 0.93410 1.21431 0.99014 1.04823 0.97697 1.20864 0.94943 0.94527 0.97916 1.20939 1.01870 1.03490 0.91030 1.20554 0.95730 0.97586 0.88188 1.98382 1.88271 1.80441 1.36471 1.20213 0.97375 1.00674 0.98335 1.20058 0.88495 0.79400 0.84048 1.90742 1.64158 1.44531 1.38864 1.42815 1.06825 1.63440 1.15536 1.17030 0.80160 1.18081 0.95802 1.20144 0.95091 1.02683 0.94526 1.20730 0.91938 1.06401 0.99444 1.17632 0.93219 0.87544 0.90880 1.19562 0.92080 1.42781 0.94252 0.90064 1.25958 1.00452 0.91927 0.95473 1.69899 1.39157 1.25817 1.05103 0.86416 0.81952 0.80483 0.78676 1.19454 1.19893 1.18150 1.20604 0.93105 1.12218 0.98186 1.20242 0.94192 0.98432 0.96001 0.92358 0.91767 0.92232 0.89384 0.89833 0.84424 0.84719 0.84856 0.83932 0.77225 0.89201 0.86802 0.90632 0.88653 0.88084 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.21 8.60 37.15 0.32 -0.89 16 2 C -0.14 -1.35 5.61 -26.73 -0.15 -1.50 16 3 C 0.07 0.79 2.54 -27.88 -0.07 0.72 16 4 H 0.10 0.95 5.15 -51.93 -0.27 0.68 16 5 O -0.27 -3.83 9.14 -39.30 -0.36 -4.19 16 6 C 0.15 1.78 5.38 -39.22 -0.21 1.57 16 7 C -0.21 -1.92 7.61 -39.43 -0.30 -2.22 16 8 C -0.06 -0.49 10.04 -39.62 -0.40 -0.89 16 9 C -0.15 -1.28 9.83 -39.52 -0.39 -1.66 16 10 C 0.01 0.06 6.32 -39.52 -0.25 -0.19 16 11 Cl -0.06 -0.60 28.95 -51.86 -1.50 -2.10 16 12 C -0.15 -1.65 9.77 -39.40 -0.38 -2.03 16 13 C 0.50 8.46 6.90 -10.98 -0.08 8.39 16 14 O -0.51 -11.22 14.18 -14.30 -0.20 -11.42 16 15 N -0.64 -10.72 5.19 -9.74 -0.05 -10.77 16 16 C -0.02 -0.41 6.29 -83.57 -0.53 -0.94 16 17 C -0.10 -2.32 9.89 -39.79 -0.39 -2.71 16 18 C -0.17 -4.15 8.70 -39.26 -0.34 -4.49 16 19 C 0.11 2.91 5.59 -106.80 -0.60 2.31 16 20 C -0.46 -11.98 8.98 -37.85 -0.34 -12.32 16 21 H 0.08 2.06 7.98 -52.49 -0.42 1.64 16 22 C 0.08 2.01 4.92 -17.34 -0.09 1.92 16 23 N -0.78 -19.25 11.37 55.55 0.63 -18.62 16 24 Si 0.90 18.06 29.64 -169.99 -5.04 13.02 16 25 H -0.27 -5.31 7.11 56.52 0.40 -4.90 16 26 H -0.27 -5.34 7.11 56.52 0.40 -4.94 16 27 H -0.26 -5.21 7.11 56.52 0.40 -4.80 16 28 C -0.22 -5.59 9.74 -39.25 -0.38 -5.97 16 29 C -0.07 -1.64 8.57 -39.79 -0.34 -1.98 16 30 H 0.06 0.37 7.23 -51.93 -0.38 -0.01 16 31 H 0.06 0.44 8.14 -51.93 -0.42 0.02 16 32 H 0.06 0.53 6.61 -51.93 -0.34 0.19 16 33 H 0.09 0.74 7.94 -51.93 -0.41 0.33 16 34 H 0.08 0.94 8.14 -51.93 -0.42 0.51 16 35 H 0.14 1.01 4.89 -52.48 -0.26 0.76 16 36 H 0.13 0.66 8.06 -52.48 -0.42 0.23 16 37 H 0.13 0.85 8.06 -52.49 -0.42 0.42 16 38 H 0.14 1.59 8.06 -52.49 -0.42 1.17 16 39 H 0.39 4.94 8.71 -40.82 -0.36 4.58 16 40 H 0.09 1.71 8.06 -52.48 -0.42 1.29 16 41 H 0.11 2.91 6.29 -52.49 -0.33 2.58 16 42 H 0.28 6.31 8.30 -40.82 -0.34 5.97 16 43 H 0.10 2.30 8.06 -52.49 -0.42 1.88 16 44 H 0.10 2.39 6.41 -52.49 -0.34 2.05 16 LS Contribution 381.15 15.07 5.74 5.74 Total: -1.00 -30.70 381.15 -10.88 -41.58 By element: Atomic # 1 Polarization: 14.83 SS G_CDS: -5.19 Total: 9.64 kcal Atomic # 6 Polarization: -17.97 SS G_CDS: -4.92 Total: -22.88 kcal Atomic # 7 Polarization: -29.97 SS G_CDS: 0.58 Total: -29.39 kcal Atomic # 8 Polarization: -15.05 SS G_CDS: -0.56 Total: -15.61 kcal Atomic # 14 Polarization: 18.06 SS G_CDS: -5.04 Total: 13.02 kcal Atomic # 17 Polarization: -0.60 SS G_CDS: -1.50 Total: -2.10 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -30.70 -10.88 -41.58 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000030852341.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.319 kcal (2) G-P(sol) polarization free energy of solvation -30.699 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.380 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.881 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.580 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.261 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds