Wall clock time and date at job start Tue Mar 31 2020 05:27:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13607 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 N 1.46495 * 109.46793 * 165.62658 * 3 2 1 5 5 C 1.37099 * 119.99977 * 264.43639 * 4 3 2 6 6 H 1.07999 * 120.00127 * 208.56744 * 5 4 3 7 7 C 1.38954 * 120.00049 * 28.56869 * 5 4 3 8 8 N 1.31409 * 119.99539 * 357.09644 * 7 5 4 9 9 Si 1.86794 * 119.99892 * 177.09232 * 7 5 4 10 10 H 1.48500 * 109.47524 * 0.02562 * 9 7 5 11 11 H 1.48508 * 109.47051 * 120.00281 * 9 7 5 12 12 H 1.48505 * 109.47282 * 239.99532 * 9 7 5 13 13 C 1.34775 * 120.00143 * 84.43481 * 4 3 2 14 14 O 1.21300 * 120.00084 * 179.97438 * 13 4 3 15 15 C 1.50699 * 120.00018 * 0.02562 * 13 4 3 16 16 C 1.53004 * 109.47060 * 179.97438 * 15 13 4 17 17 N 1.46907 * 109.46836 * 179.97438 * 16 15 13 18 18 C 1.48554 * 110.99879 * 285.17910 * 17 16 15 19 19 C 1.54390 * 104.59093 * 200.95821 * 18 17 16 20 20 C 1.54262 * 105.05724 * 23.85638 * 19 18 17 21 21 C 1.48718 * 111.01314 * 169.66414 * 17 16 15 22 22 H 1.09010 * 110.38572 * 40.25034 * 21 17 16 23 23 C 1.52993 * 110.51386 * 277.75740 * 21 17 16 24 24 C 1.50699 * 109.47466 * 178.59677 * 23 21 17 25 25 C 1.38273 * 119.98373 * 274.65640 * 24 23 21 26 26 C 1.38214 * 120.04909 * 179.76361 * 25 24 23 27 27 C 1.38225 * 120.03124 * 0.51158 * 26 25 24 28 28 C 1.38443 * 119.96779 * 359.74298 * 27 26 25 29 29 F 1.35095 * 120.02308 * 179.97438 * 28 27 26 30 30 C 1.38172 * 119.99365 * 94.93063 * 24 23 21 31 31 H 1.09001 * 109.47041 * 45.62443 * 3 2 1 32 32 H 1.08997 * 109.47166 * 285.62478 * 3 2 1 33 33 H 0.97004 * 119.99456 * 180.02562 * 8 7 5 34 34 H 1.09005 * 109.46993 * 59.99510 * 15 13 4 35 35 H 1.08997 * 109.47417 * 299.99943 * 15 13 4 36 36 H 1.08997 * 109.46802 * 60.00617 * 16 15 13 37 37 H 1.08994 * 109.47607 * 299.99740 * 16 15 13 38 38 H 1.08995 * 110.41630 * 82.18574 * 18 17 16 39 39 H 1.08994 * 110.41590 * 319.73118 * 18 17 16 40 40 H 1.08997 * 110.32537 * 264.95826 * 19 18 17 41 41 H 1.08998 * 110.40806 * 142.79397 * 19 18 17 42 42 H 1.08996 * 110.32418 * 118.89776 * 20 19 18 43 43 H 1.09001 * 110.31789 * 241.00079 * 20 19 18 44 44 H 1.09005 * 109.46528 * 298.59081 * 23 21 17 45 45 H 1.08997 * 109.47557 * 58.58666 * 23 21 17 46 46 H 1.08004 * 119.96958 * 0.02562 * 25 24 23 47 47 H 1.08004 * 119.99055 * 180.25377 * 26 25 24 48 48 H 1.07993 * 120.01721 * 179.71899 * 27 26 25 49 49 H 1.08008 * 120.01152 * 0.02562 * 30 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 7 3.0957 1.3388 -0.3429 5 6 3.4326 1.6345 -1.6385 6 1 4.1842 2.3824 -1.8438 7 6 2.8069 0.9721 -2.6876 8 7 1.9340 0.0223 -2.4373 9 14 3.2067 1.4318 -4.4534 10 1 4.2140 2.5229 -4.4650 11 1 3.7532 0.2466 -5.1619 12 1 1.9710 1.8909 -5.1373 13 6 3.2132 2.2793 0.6153 14 8 3.6174 3.3872 0.3315 15 6 2.8434 1.9541 2.0396 16 6 3.0684 3.1859 2.9189 17 7 2.7074 2.8691 4.3072 18 6 1.2323 2.8143 4.4744 19 6 1.0045 3.0187 5.9876 20 6 2.2592 3.7662 6.4844 21 6 3.1417 3.9504 5.2312 22 1 2.9647 4.9277 4.7819 23 6 4.6198 3.7869 5.5907 24 6 5.0435 4.9123 6.4989 25 6 5.4515 6.1187 5.9602 26 6 5.8358 7.1535 6.7920 27 6 5.8226 6.9800 8.1633 28 6 5.4193 5.7709 8.7035 29 9 5.4065 5.6000 10.0436 30 6 5.0295 4.7366 7.8693 31 1 2.9717 -0.7179 -0.7346 32 1 2.9715 -0.2760 0.9897 33 1 1.4975 -0.4405 -3.1697 34 1 3.4652 1.1337 2.3981 35 1 1.7944 1.6616 2.0850 36 1 2.4469 4.0065 2.5605 37 1 4.1175 3.4780 2.8736 38 1 0.8499 1.8431 4.1603 39 1 0.7554 3.6133 3.9069 40 1 0.9137 2.0558 6.4903 41 1 0.1123 3.6206 6.1598 42 1 1.9829 4.7357 6.8988 43 1 2.7831 3.1709 7.2322 44 1 4.7666 2.8343 6.0999 45 1 5.2196 3.8086 4.6808 46 1 5.4660 6.2538 4.8887 47 1 6.1504 8.0967 6.3703 48 1 6.1272 7.7872 8.8128 49 1 4.7154 3.7926 8.2897 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000069534968.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:27:04 Heat of formation + Delta-G solvation = -20.431447 kcal Electronic energy + Delta-G solvation = -31438.361765 eV Core-core repulsion = 27086.942566 eV Total energy + Delta-G solvation = -4351.419200 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 359.175 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -49.13981 -39.97318 -39.04499 -38.42112 -35.80467 -34.36447 -33.70940 -32.88536 -31.81477 -30.85261 -29.60907 -28.93853 -27.36810 -25.86681 -24.97855 -23.03403 -22.91284 -22.01341 -20.76191 -20.11398 -18.94557 -17.83275 -17.44515 -16.78694 -16.55787 -16.43753 -16.32757 -15.87051 -15.68206 -15.35192 -14.88288 -14.60528 -14.46965 -14.18784 -13.94915 -13.84377 -13.34768 -13.31682 -13.03013 -12.96341 -12.83236 -12.64886 -12.15528 -12.10840 -11.92294 -11.87416 -11.73032 -11.51654 -11.33886 -11.27663 -11.22769 -11.17792 -11.04516 -10.83208 -10.63771 -10.54652 -10.49227 -10.37748 -10.31015 -9.22415 -9.18844 -8.91440 -8.63403 -8.44781 -8.00067 -6.47436 -4.11188 0.88410 0.93035 3.09812 3.21410 3.26461 3.28717 3.58231 3.75696 3.86757 4.01737 4.03289 4.15538 4.42922 4.45813 4.58998 4.64223 4.79472 4.83698 4.93611 4.95857 5.00938 5.03392 5.14195 5.26145 5.28240 5.37590 5.41750 5.45494 5.52804 5.56795 5.67557 5.75146 5.76840 5.79563 5.83393 5.89746 5.94983 5.98652 6.03190 6.06490 6.10112 6.15473 6.27198 6.33665 6.36024 6.63127 6.68184 6.91121 7.10160 7.43394 7.96227 8.28518 8.79377 8.99788 9.17534 9.72751 10.57079 Molecular weight = 359.18amu Principal moments of inertia in cm(-1) A = 0.016709 B = 0.002061 C = 0.001890 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1675.328899 B =13579.866124 C =14811.174848 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.484 5.484 2 C 0.253 3.747 3 C 0.222 3.778 4 N -0.449 5.449 5 C -0.305 4.305 6 H 0.103 0.897 7 C 0.033 3.967 8 N -0.891 5.891 9 Si 0.932 3.068 10 H -0.268 1.268 11 H -0.280 1.280 12 H -0.282 1.282 13 C 0.463 3.537 14 O -0.575 6.575 15 C -0.129 4.129 16 C 0.065 3.935 17 N -0.508 5.508 18 C 0.031 3.969 19 C -0.124 4.124 20 C -0.118 4.118 21 C 0.070 3.930 22 H 0.055 0.945 23 C -0.070 4.070 24 C -0.044 4.044 25 C -0.126 4.126 26 C -0.088 4.088 27 C -0.163 4.163 28 C 0.097 3.903 29 F -0.143 7.143 30 C -0.149 4.149 31 H 0.134 0.866 32 H 0.079 0.921 33 H 0.273 0.727 34 H 0.090 0.910 35 H 0.077 0.923 36 H 0.043 0.957 37 H 0.081 0.919 38 H 0.083 0.917 39 H 0.045 0.955 40 H 0.071 0.929 41 H 0.065 0.935 42 H 0.064 0.936 43 H 0.071 0.929 44 H 0.084 0.916 45 H 0.082 0.918 46 H 0.131 0.869 47 H 0.132 0.868 48 H 0.132 0.868 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.091 6.478 20.080 21.960 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.165 5.165 2 C -0.065 4.065 3 C 0.095 3.905 4 N -0.170 5.170 5 C -0.432 4.432 6 H 0.121 0.879 7 C -0.170 4.170 8 N -0.531 5.531 9 Si 0.758 3.242 10 H -0.192 1.192 11 H -0.206 1.206 12 H -0.208 1.208 13 C 0.252 3.748 14 O -0.458 6.458 15 C -0.170 4.170 16 C -0.063 4.063 17 N -0.232 5.232 18 C -0.097 4.097 19 C -0.162 4.162 20 C -0.156 4.156 21 C -0.038 4.038 22 H 0.073 0.927 23 C -0.107 4.107 24 C -0.045 4.045 25 C -0.145 4.145 26 C -0.107 4.107 27 C -0.181 4.181 28 C 0.077 3.923 29 F -0.121 7.121 30 C -0.168 4.168 31 H 0.152 0.848 32 H 0.096 0.904 33 H 0.083 0.917 34 H 0.108 0.892 35 H 0.095 0.905 36 H 0.061 0.939 37 H 0.099 0.901 38 H 0.102 0.898 39 H 0.063 0.937 40 H 0.090 0.910 41 H 0.084 0.916 42 H 0.083 0.917 43 H 0.090 0.910 44 H 0.103 0.897 45 H 0.101 0.899 46 H 0.149 0.851 47 H 0.150 0.850 48 H 0.150 0.850 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 4.775 6.382 19.953 21.486 hybrid contribution -0.034 0.795 -1.101 1.359 sum 4.742 7.177 18.852 20.722 Atomic orbital electron populations 1.80892 1.13709 1.08670 1.13193 1.29331 0.95403 0.92340 0.89401 1.18800 0.81480 0.89170 1.01079 1.43551 1.57338 1.07965 1.08097 1.19697 1.20620 1.22988 0.79924 0.87918 1.25405 0.94909 0.95966 1.00703 1.69645 1.27288 1.23121 1.33011 0.85766 0.78377 0.78563 0.81448 1.19175 1.20626 1.20777 1.20247 0.82920 0.84832 0.86847 1.90540 1.50100 1.21964 1.83150 1.21507 1.02697 0.99387 0.93391 1.21946 1.01914 0.96344 0.86107 1.65280 1.10631 1.41279 1.06048 1.23136 0.88827 1.01866 0.95862 1.22291 0.97601 1.00767 0.95566 1.22350 0.95837 1.00293 0.97083 1.22565 0.93926 0.93990 0.93364 0.92710 1.20573 0.95312 0.96120 0.98741 1.19762 0.96258 0.95469 0.92973 1.21228 0.99793 0.92771 1.00665 1.21021 0.98034 0.99259 0.92338 1.21132 1.03922 0.96673 0.96407 1.17714 1.02159 0.95347 0.77037 1.91494 1.94350 1.95997 1.30288 1.21069 1.03339 0.99119 0.93239 0.84823 0.90369 0.91653 0.89155 0.90470 0.93870 0.90057 0.89844 0.93712 0.91039 0.91623 0.91691 0.90998 0.89714 0.89937 0.85117 0.85038 0.85034 0.84745 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.48 -11.41 18.54 42.16 0.78 -10.63 16 2 C 0.25 5.54 12.80 -20.76 -0.27 5.27 16 3 C 0.22 4.35 4.91 -6.83 -0.03 4.31 16 4 N -0.45 -10.24 2.60 -117.94 -0.31 -10.55 16 5 C -0.30 -7.71 9.18 -14.93 -0.14 -7.85 16 6 H 0.10 2.72 7.50 -52.49 -0.39 2.33 16 7 C 0.03 0.80 5.32 -17.47 -0.09 0.71 16 8 N -0.89 -22.21 8.81 55.50 0.49 -21.72 16 9 Si 0.93 19.96 29.55 -169.99 -5.02 14.93 16 10 H -0.27 -5.73 7.11 56.52 0.40 -5.32 16 11 H -0.28 -5.84 7.11 56.52 0.40 -5.44 16 12 H -0.28 -6.23 7.11 56.52 0.40 -5.82 16 13 C 0.46 10.11 7.57 -10.99 -0.08 10.02 16 14 O -0.57 -14.43 15.74 5.54 0.09 -14.34 16 15 C -0.13 -2.14 4.42 -27.88 -0.12 -2.26 16 16 C 0.07 0.98 4.07 -3.82 -0.02 0.96 16 17 N -0.51 -6.31 5.02 -222.01 -1.11 -7.43 16 18 C 0.03 0.37 5.93 -2.18 -0.01 0.36 16 19 C -0.12 -1.20 7.00 -25.34 -0.18 -1.37 16 20 C -0.12 -1.09 5.75 -25.35 -0.15 -1.23 16 21 C 0.07 0.74 2.31 -65.99 -0.15 0.59 16 22 H 0.05 0.63 8.00 -51.92 -0.42 0.21 16 23 C -0.07 -0.66 4.98 -27.89 -0.14 -0.80 16 24 C -0.04 -0.40 4.80 -104.63 -0.50 -0.90 16 25 C -0.13 -1.10 9.72 -39.58 -0.38 -1.48 16 26 C -0.09 -0.69 10.04 -39.59 -0.40 -1.09 16 27 C -0.16 -1.34 10.03 -39.51 -0.40 -1.74 16 28 C 0.10 0.91 7.30 -39.42 -0.29 0.63 16 29 F -0.14 -1.47 17.27 2.25 0.04 -1.43 16 30 C -0.15 -1.33 9.00 -39.52 -0.36 -1.69 16 31 H 0.13 2.72 6.53 -51.93 -0.34 2.38 16 32 H 0.08 1.18 6.67 -51.93 -0.35 0.83 16 33 H 0.27 6.67 8.31 -40.82 -0.34 6.33 16 34 H 0.09 1.31 7.41 -51.93 -0.39 0.92 16 35 H 0.08 1.30 6.86 -51.93 -0.36 0.94 16 36 H 0.04 0.72 7.72 -51.93 -0.40 0.32 16 37 H 0.08 1.24 7.11 -51.93 -0.37 0.87 16 38 H 0.08 1.02 7.85 -51.93 -0.41 0.62 16 39 H 0.04 0.57 7.75 -51.93 -0.40 0.17 16 40 H 0.07 0.65 8.14 -51.93 -0.42 0.23 16 41 H 0.07 0.58 8.14 -51.93 -0.42 0.16 16 42 H 0.06 0.58 8.14 -51.93 -0.42 0.16 16 43 H 0.07 0.62 7.18 -51.93 -0.37 0.24 16 44 H 0.08 0.77 7.97 -51.93 -0.41 0.36 16 45 H 0.08 0.83 7.24 -51.93 -0.38 0.45 16 46 H 0.13 1.05 8.06 -52.48 -0.42 0.62 16 47 H 0.13 0.74 8.06 -52.48 -0.42 0.32 16 48 H 0.13 0.86 8.06 -52.49 -0.42 0.43 16 49 H 0.13 1.06 7.69 -52.48 -0.40 0.65 16 LS Contribution 404.35 15.07 6.09 6.09 Total: -1.00 -29.97 404.35 -9.71 -39.68 By element: Atomic # 1 Polarization: 10.01 SS G_CDS: -7.05 Total: 2.95 kcal Atomic # 6 Polarization: 6.14 SS G_CDS: -3.70 Total: 2.44 kcal Atomic # 7 Polarization: -50.17 SS G_CDS: -0.15 Total: -50.32 kcal Atomic # 8 Polarization: -14.43 SS G_CDS: 0.09 Total: -14.34 kcal Atomic # 9 Polarization: -1.47 SS G_CDS: 0.04 Total: -1.43 kcal Atomic # 14 Polarization: 19.96 SS G_CDS: -5.02 Total: 14.93 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -29.97 -9.71 -39.68 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000069534968.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.246 kcal (2) G-P(sol) polarization free energy of solvation -29.968 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.722 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.710 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.677 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.431 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds