Wall clock time and date at job start Tue Mar 31 2020 06:14:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 N 1.46493 * 109.47065 * 2 1 4 4 C 1.36862 * 120.00255 * 85.52812 * 3 2 1 5 5 H 1.07997 * 120.00478 * 167.34571 * 4 3 2 6 6 C 1.39049 * 119.99768 * 347.34257 * 4 3 2 7 7 N 1.31360 * 119.99917 * 3.03789 * 6 4 3 8 8 Si 1.86799 * 120.00038 * 183.04366 * 6 4 3 9 9 H 1.48501 * 109.47077 * 359.97438 * 8 6 4 10 10 H 1.48504 * 109.47083 * 119.99628 * 8 6 4 11 11 H 1.48500 * 109.47183 * 239.99622 * 8 6 4 12 12 C 1.34777 * 120.00069 * 265.52454 * 3 2 1 13 13 O 1.21603 * 119.99920 * 177.49093 * 12 3 2 14 14 C 1.47702 * 119.99918 * 357.48238 * 12 3 2 15 15 N 1.34213 * 125.64707 * 186.34065 * 14 12 3 16 16 C 1.30475 * 109.82818 * 180.02562 * 15 14 12 17 17 C 1.50700 * 125.84348 * 180.02562 * 16 15 14 18 18 C 1.53004 * 117.50157 * 13.35633 * 17 16 15 19 19 C 1.53007 * 117.49965 * 304.73173 * 17 16 15 20 20 N 1.35056 * 108.31373 * 0.02562 * 16 15 14 21 21 C 1.40146 * 126.75847 * 179.97438 * 20 16 15 22 22 C 1.38851 * 120.07516 * 311.58840 * 21 20 16 23 23 C 1.38098 * 119.94564 * 180.02562 * 22 21 20 24 24 C 1.38311 * 120.09554 * 359.97438 * 23 22 21 25 25 C 1.38251 * 120.14767 * 0.04775 * 24 23 22 26 26 C 1.38251 * 120.05470 * 359.95278 * 25 24 23 27 27 Cl 1.73599 * 120.04898 * 180.02562 * 26 25 24 28 28 N 1.31817 * 125.65006 * 6.68174 * 14 12 3 29 29 H 1.09003 * 109.47683 * 180.02562 * 1 2 3 30 30 H 1.09004 * 109.46866 * 299.99578 * 1 2 3 31 31 H 1.08998 * 109.47362 * 59.99454 * 1 2 3 32 32 H 1.09001 * 109.46641 * 239.99940 * 2 1 3 33 33 H 1.08998 * 109.47362 * 120.00546 * 2 1 3 34 34 H 0.97000 * 120.00189 * 180.02562 * 7 6 4 35 35 H 1.08997 * 115.55170 * 159.06361 * 17 16 15 36 36 H 1.09007 * 117.49037 * 359.97438 * 18 17 16 37 37 H 1.08989 * 117.50005 * 145.02130 * 18 17 16 38 38 H 1.08998 * 117.49894 * 214.98089 * 19 17 16 39 39 H 1.08999 * 117.49787 * 359.97438 * 19 17 16 40 40 H 1.07999 * 120.02432 * 359.74094 * 22 21 20 41 41 H 1.08002 * 119.95423 * 180.02562 * 23 22 21 42 42 H 1.07997 * 119.93105 * 180.02562 * 24 23 22 43 43 H 1.08000 * 119.97708 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.1593 2.0572 1.1816 5 1 2.7044 2.9891 1.2090 6 6 1.6005 1.5442 2.3470 7 7 0.9889 0.3819 2.3258 8 14 1.7194 2.5080 3.9427 9 1 2.4526 3.7766 3.7013 10 1 0.3537 2.8121 4.4403 11 1 2.4470 1.7013 4.9552 12 6 2.3288 1.9862 -1.1636 13 8 2.6905 3.1471 -1.1677 14 6 2.2299 1.2390 -2.4339 15 7 2.6222 1.6861 -3.6370 16 6 2.3926 0.7764 -4.5437 17 6 2.6949 0.9007 -6.0148 18 6 3.6000 2.0530 -6.4552 19 6 2.1011 2.0983 -6.7594 20 7 1.8376 -0.2957 -3.9382 21 6 1.4371 -1.4909 -4.5507 22 6 0.6589 -1.4569 -5.7002 23 6 0.2653 -2.6362 -6.3013 24 6 0.6456 -3.8510 -5.7603 25 6 1.4199 -3.8894 -4.6156 26 6 1.8174 -2.7125 -4.0088 27 17 2.7903 -2.7609 -2.5719 28 7 1.7358 0.0250 -2.5746 29 1 -0.3634 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8901 31 1 -0.3634 0.5139 -0.8899 32 1 1.8932 -0.5139 -0.8900 33 1 1.8934 -0.5139 0.8899 34 1 0.5988 0.0241 3.1386 35 1 2.7766 -0.0401 -6.5591 36 1 3.9764 2.7214 -5.6808 37 1 4.2774 1.8703 -7.2892 38 1 1.7926 1.9454 -7.7935 39 1 1.4915 2.7960 -6.1852 40 1 0.3579 -0.5090 -6.1212 41 1 -0.3396 -2.6100 -7.1956 42 1 0.3366 -4.7717 -6.2328 43 1 1.7149 -4.8395 -4.1953 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000069560543.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:14:49 Heat of formation + Delta-G solvation = 146.284413 kcal Electronic energy + Delta-G solvation = -30303.787328 eV Core-core repulsion = 26186.674840 eV Total energy + Delta-G solvation = -4117.112488 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 360.109 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.00419 -39.50153 -38.29785 -37.10881 -36.46146 -35.14695 -34.01707 -31.97383 -31.19455 -30.51778 -29.54323 -29.24903 -25.66994 -24.62968 -23.58572 -22.96118 -22.45977 -22.24157 -21.54910 -19.95899 -19.24528 -17.94118 -17.03680 -16.71465 -16.39269 -16.16753 -15.27560 -14.98165 -14.84432 -14.66416 -14.54526 -14.13390 -13.94646 -13.85142 -13.38143 -13.07088 -12.72597 -12.36074 -12.31037 -11.95847 -11.84907 -11.66830 -11.59502 -11.54188 -11.35468 -11.00325 -10.94408 -10.88460 -10.69099 -10.57949 -10.34198 -10.21606 -10.06961 -9.94388 -9.47995 -9.17777 -9.02344 -8.74011 -8.63451 -8.55762 -7.70706 -6.26997 -3.87583 0.57707 0.82512 1.75570 2.00586 2.37336 2.69767 3.18017 3.21480 3.22920 3.30472 3.75670 3.89016 4.13524 4.34269 4.36976 4.48976 4.54289 4.65807 4.80049 4.83257 4.87130 4.94671 5.04194 5.17843 5.33310 5.39825 5.51707 5.61701 5.63299 5.78722 5.84342 5.97149 5.98700 6.15286 6.24113 6.43121 6.58195 6.76631 6.87186 6.94578 7.08054 7.20532 7.37830 7.61912 7.89497 8.01853 8.32071 8.55691 9.11030 9.34480 9.93087 10.57062 Molecular weight = 360.11amu Principal moments of inertia in cm(-1) A = 0.011753 B = 0.003797 C = 0.003086 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2381.822754 B = 7371.738233 C = 9070.575378 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.126 4.126 2 C 0.101 3.899 3 N -0.407 5.407 4 C -0.287 4.287 5 H 0.109 0.891 6 C 0.025 3.975 7 N -0.860 5.860 8 Si 0.937 3.063 9 H -0.266 1.266 10 H -0.279 1.279 11 H -0.280 1.280 12 C 0.503 3.497 13 O -0.571 6.571 14 C 0.229 3.771 15 N -0.490 5.490 16 C 0.307 3.693 17 C -0.101 4.101 18 C -0.145 4.145 19 C -0.153 4.153 20 N -0.353 5.353 21 C 0.163 3.837 22 C -0.109 4.109 23 C -0.101 4.101 24 C -0.108 4.108 25 C -0.099 4.099 26 C -0.029 4.029 27 Cl -0.034 7.034 28 N -0.261 5.261 29 H 0.032 0.968 30 H 0.086 0.914 31 H 0.012 0.988 32 H 0.074 0.926 33 H 0.109 0.891 34 H 0.267 0.733 35 H 0.125 0.875 36 H 0.114 0.886 37 H 0.103 0.897 38 H 0.104 0.896 39 H 0.104 0.896 40 H 0.139 0.861 41 H 0.138 0.862 42 H 0.137 0.863 43 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.375 -11.281 -19.074 22.203 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C -0.022 4.022 3 N -0.124 5.124 4 C -0.416 4.416 5 H 0.126 0.874 6 C -0.178 4.178 7 N -0.500 5.500 8 Si 0.763 3.237 9 H -0.190 1.190 10 H -0.205 1.205 11 H -0.206 1.206 12 C 0.288 3.712 13 O -0.454 6.454 14 C -0.052 4.052 15 N -0.216 5.216 16 C 0.032 3.968 17 C -0.121 4.121 18 C -0.183 4.183 19 C -0.192 4.192 20 N -0.139 5.139 21 C 0.069 3.931 22 C -0.130 4.130 23 C -0.120 4.120 24 C -0.127 4.127 25 C -0.118 4.118 26 C -0.059 4.059 27 Cl -0.004 7.004 28 N -0.089 5.089 29 H 0.051 0.949 30 H 0.104 0.896 31 H 0.031 0.969 32 H 0.091 0.909 33 H 0.127 0.873 34 H 0.078 0.922 35 H 0.143 0.857 36 H 0.132 0.868 37 H 0.121 0.879 38 H 0.122 0.878 39 H 0.122 0.878 40 H 0.157 0.843 41 H 0.156 0.844 42 H 0.155 0.845 43 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.323 -10.897 -18.175 21.233 hybrid contribution -0.131 -0.104 0.744 0.763 sum -1.455 -11.001 -17.431 20.664 Atomic orbital electron populations 1.22008 0.96497 0.99285 1.00620 1.22248 0.95134 0.82361 1.02459 1.43748 1.52163 1.12357 1.04152 1.19964 1.31652 1.06489 0.83522 0.87368 1.25436 0.95698 0.96594 1.00078 1.70220 1.34903 1.16739 1.28186 0.85683 0.78193 0.79619 0.80225 1.19002 1.20471 1.20588 1.16225 0.88615 0.86116 0.80272 1.90641 1.54035 1.15899 1.84785 1.24686 0.95997 0.89546 0.95018 1.70429 1.24442 1.28409 0.98305 1.23441 0.94411 0.83443 0.95495 1.20309 1.09538 0.96153 0.86142 1.23059 0.93056 0.98956 1.03246 1.23080 0.97407 0.98319 1.00396 1.47985 1.47244 1.11683 1.06972 1.17250 0.98767 0.82708 0.94376 1.21145 0.96588 1.00227 0.95022 1.21092 0.99420 0.91334 1.00139 1.21217 0.97474 0.98596 0.95369 1.21054 0.98174 0.96736 0.95845 1.21061 0.98990 0.93411 0.92405 1.98443 1.68066 1.98652 1.35257 1.79161 1.25105 1.15629 0.89008 0.94861 0.89554 0.96893 0.90852 0.87303 0.92152 0.85682 0.86751 0.87908 0.87779 0.87801 0.84278 0.84440 0.84517 0.84090 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -3.02 9.32 37.16 0.35 -2.67 16 2 C 0.10 2.54 5.00 -4.05 -0.02 2.52 16 3 N -0.41 -11.23 2.62 -115.94 -0.30 -11.53 16 4 C -0.29 -8.11 9.47 -15.01 -0.14 -8.26 16 5 H 0.11 3.17 7.25 -52.49 -0.38 2.79 16 6 C 0.03 0.65 5.31 -17.45 -0.09 0.56 16 7 N -0.86 -22.01 7.19 55.50 0.40 -21.61 16 8 Si 0.94 20.53 29.55 -169.99 -5.02 15.51 16 9 H -0.27 -5.89 7.11 56.52 0.40 -5.49 16 10 H -0.28 -6.05 7.11 56.52 0.40 -5.65 16 11 H -0.28 -6.01 7.11 56.52 0.40 -5.60 16 12 C 0.50 14.06 7.63 -12.39 -0.09 13.96 16 13 O -0.57 -17.50 16.71 5.28 0.09 -17.41 16 14 C 0.23 5.57 7.67 -156.46 -1.20 4.37 16 15 N -0.49 -10.73 10.80 -8.57 -0.09 -10.83 16 16 C 0.31 5.33 7.35 -155.42 -1.14 4.19 16 17 C -0.10 -1.20 5.02 -91.77 -0.46 -1.66 16 18 C -0.15 -1.57 10.14 -26.72 -0.27 -1.84 16 19 C -0.15 -1.52 10.24 -26.72 -0.27 -1.80 16 20 N -0.35 -6.25 3.38 -8.01 -0.03 -6.28 16 21 C 0.16 2.29 6.05 -83.56 -0.51 1.79 16 22 C -0.11 -1.13 8.56 -39.41 -0.34 -1.47 16 23 C -0.10 -0.75 10.04 -39.61 -0.40 -1.15 16 24 C -0.11 -0.79 10.04 -39.55 -0.40 -1.19 16 25 C -0.10 -0.95 9.83 -39.57 -0.39 -1.34 16 26 C -0.03 -0.39 6.34 -39.31 -0.25 -0.64 16 27 Cl -0.03 -0.53 27.32 -51.86 -1.42 -1.95 16 28 N -0.26 -5.65 7.46 32.02 0.24 -5.41 16 29 H 0.03 0.72 8.14 -51.93 -0.42 0.30 16 30 H 0.09 2.23 5.85 -51.93 -0.30 1.93 16 31 H 0.01 0.30 8.09 -51.93 -0.42 -0.12 16 32 H 0.07 1.77 4.57 -57.85 -0.26 1.50 16 33 H 0.11 2.88 5.96 -51.93 -0.31 2.57 16 34 H 0.27 6.42 8.31 -40.82 -0.34 6.09 16 35 H 0.13 1.19 7.42 -51.93 -0.39 0.81 16 36 H 0.11 1.54 7.93 -51.93 -0.41 1.13 16 37 H 0.10 0.82 8.14 -51.94 -0.42 0.39 16 38 H 0.10 0.71 8.14 -51.93 -0.42 0.28 16 39 H 0.10 1.23 8.14 -51.93 -0.42 0.81 16 40 H 0.14 1.30 7.58 -52.49 -0.40 0.90 16 41 H 0.14 0.61 8.06 -52.49 -0.42 0.19 16 42 H 0.14 0.59 8.06 -52.49 -0.42 0.16 16 43 H 0.14 1.09 8.06 -52.49 -0.42 0.66 16 LS Contribution 374.05 15.07 5.64 5.64 Total: -1.00 -33.77 374.05 -11.09 -44.86 By element: Atomic # 1 Polarization: 8.60 SS G_CDS: -4.97 Total: 3.63 kcal Atomic # 6 Polarization: 10.99 SS G_CDS: -5.63 Total: 5.37 kcal Atomic # 7 Polarization: -55.87 SS G_CDS: 0.21 Total: -55.65 kcal Atomic # 8 Polarization: -17.50 SS G_CDS: 0.09 Total: -17.41 kcal Atomic # 14 Polarization: 20.53 SS G_CDS: -5.02 Total: 15.51 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -1.42 Total: -1.95 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -33.77 -11.09 -44.86 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000069560543.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 191.147 kcal (2) G-P(sol) polarization free energy of solvation -33.768 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 157.379 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.095 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.863 kcal (6) G-S(sol) free energy of system = (1) + (5) 146.284 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds