Wall clock time and date at job start Tue Mar 31 2020 05:02:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.46503 * 119.99966 * 2 1 4 4 C 1.39028 * 120.00343 * 179.97438 * 2 1 3 5 5 C 1.39044 * 119.62770 * 5.00480 * 4 2 1 6 6 C 1.39627 * 118.95414 * 179.97438 * 5 4 2 7 7 C 1.48007 * 120.88586 * 180.02562 * 6 5 4 8 8 O 1.21564 * 120.00091 * 328.63307 * 7 6 5 9 9 N 1.34772 * 120.00466 * 148.63011 * 7 6 5 10 10 C 1.36805 * 119.99881 * 6.35198 * 9 7 6 11 11 H 1.07998 * 119.99618 * 320.58637 * 10 9 7 12 12 C 1.39098 * 119.99906 * 140.57894 * 10 9 7 13 13 N 1.31337 * 119.99794 * 160.33691 * 12 10 9 14 14 Si 1.86800 * 120.00492 * 340.33915 * 12 10 9 15 15 H 1.48505 * 109.47114 * 93.96207 * 14 12 10 16 16 H 1.48502 * 109.47362 * 213.96778 * 14 12 10 17 17 H 1.48502 * 109.46933 * 333.96878 * 14 12 10 18 18 C 1.46501 * 120.00619 * 186.35329 * 9 7 6 19 19 C 1.50695 * 109.47059 * 92.53948 * 18 9 7 20 20 C 1.38238 * 119.99857 * 269.83291 * 19 18 9 21 21 C 1.38240 * 119.99881 * 179.76941 * 20 19 18 22 22 C 1.38242 * 119.99666 * 0.50629 * 21 20 19 23 23 C 1.38238 * 120.00270 * 359.74821 * 22 21 20 24 24 C 1.38234 * 119.99723 * 359.97438 * 23 22 21 25 25 C 1.40050 * 118.23565 * 0.02562 * 6 5 4 26 26 C 1.38093 * 119.15069 * 359.97438 * 25 6 5 27 27 Cl 1.73605 * 119.51134 * 179.97438 * 26 25 6 28 28 N 1.32028 * 120.97641 * 359.72269 * 26 25 6 29 29 H 1.08995 * 109.46804 * 0.02562 * 1 2 3 30 30 H 1.08996 * 109.47370 * 240.00230 * 1 2 3 31 31 H 1.08998 * 109.46805 * 120.00358 * 1 2 3 32 32 H 1.08996 * 109.47083 * 89.99714 * 3 2 1 33 33 H 1.08996 * 109.47096 * 209.99665 * 3 2 1 34 34 H 1.08992 * 109.46985 * 329.99684 * 3 2 1 35 35 H 1.08005 * 120.52484 * 0.02562 * 5 4 2 36 36 H 0.96996 * 119.99609 * 180.02562 * 13 12 10 37 37 H 1.08997 * 109.47122 * 212.54582 * 18 9 7 38 38 H 1.08998 * 109.46685 * 332.53887 * 18 9 7 39 39 H 1.07994 * 120.00089 * 0.02562 * 20 19 18 40 40 H 1.07997 * 120.00484 * 180.23020 * 21 20 19 41 41 H 1.07997 * 119.99861 * 179.72463 * 22 21 20 42 42 H 1.07998 * 120.00210 * 179.97438 * 23 22 21 43 43 H 1.08002 * 119.99987 * 179.97438 * 24 23 22 44 44 H 1.07999 * 120.43106 * 180.02562 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.1602 -1.2040 0.0005 5 6 1.4613 -2.4014 -0.1044 6 6 2.1736 -3.6023 -0.1029 7 6 1.4730 -4.9014 -0.2130 8 8 0.3550 -5.0299 0.2467 9 7 2.0745 -5.9419 -0.8228 10 6 3.3782 -5.8389 -1.2243 11 1 3.7392 -4.9168 -1.6552 12 6 4.2387 -6.9219 -1.0774 13 7 5.3436 -6.9833 -1.7848 14 14 3.8230 -8.2888 0.1259 15 1 3.1102 -9.3779 -0.5890 16 1 5.0748 -8.8231 0.7200 17 1 2.9534 -7.7522 1.2035 18 6 1.3322 -7.1833 -1.0559 19 6 0.7014 -7.1421 -2.4238 20 6 -0.5715 -6.6269 -2.5827 21 6 -1.1483 -6.5848 -3.8383 22 6 -0.4562 -7.0674 -4.9334 23 6 0.8147 -7.5874 -4.7737 24 6 1.3936 -7.6243 -3.5190 25 6 3.5687 -3.5449 0.0054 26 6 4.1856 -2.3135 0.1055 27 17 5.9144 -2.2315 0.2409 28 7 3.4804 -1.1974 0.0949 29 1 -0.3633 1.0276 -0.0005 30 1 -0.3634 -0.5138 0.8900 31 1 -0.3633 -0.5139 -0.8899 32 1 2.3791 1.5834 1.0276 33 1 3.1499 1.1384 -0.5138 34 1 1.6085 2.0283 -0.5138 35 1 0.3843 -2.4026 -0.1865 36 1 5.9435 -7.7386 -1.6826 37 1 2.0144 -8.0313 -0.9956 38 1 0.5541 -7.2886 -0.2999 39 1 -1.1137 -6.2536 -1.7266 40 1 -2.1413 -6.1789 -3.9632 41 1 -0.9085 -7.0386 -5.9137 42 1 1.3552 -7.9649 -5.6291 43 1 2.3864 -8.0309 -3.3940 44 1 4.1548 -4.4521 0.0097 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000071903499.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:02:49 Heat of formation + Delta-G solvation = 60.735836 kcal Electronic energy + Delta-G solvation = -29856.980929 eV Core-core repulsion = 25801.584688 eV Total energy + Delta-G solvation = -4055.396241 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 359.114 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -40.25273 -39.20890 -38.13207 -36.62513 -35.68962 -35.24230 -32.57058 -32.15443 -30.91026 -30.42928 -29.88652 -28.16086 -26.24542 -25.57538 -24.83643 -23.05905 -22.07896 -21.70722 -20.98736 -19.34811 -18.06898 -17.04428 -16.57191 -16.16843 -15.89502 -15.38611 -15.21862 -15.07845 -14.79208 -14.55489 -14.45449 -14.21100 -13.90030 -13.71897 -13.42526 -12.98585 -12.79644 -12.59371 -12.52105 -12.49517 -12.24309 -12.11839 -11.99979 -11.71016 -11.40800 -11.33211 -11.13882 -10.87002 -10.80772 -10.58209 -10.30120 -10.06486 -9.52209 -9.49069 -9.37142 -9.07805 -8.81422 -8.46111 -8.28475 -7.99719 -7.27910 -6.64143 -4.25459 1.32058 1.70080 1.75264 1.86617 2.23124 2.92701 3.10400 3.12874 3.18186 3.57404 3.92933 3.98887 4.30710 4.43353 4.75491 4.92659 5.13766 5.28321 5.29178 5.31306 5.37427 5.41078 5.46464 5.58937 5.61181 5.64028 5.68458 5.74249 5.76077 5.87270 5.96356 6.01688 6.08133 6.18275 6.29640 6.43770 6.52633 6.72397 6.88430 6.92538 6.95685 7.04624 7.12240 7.18013 7.45664 7.50548 7.84859 8.05751 8.27168 8.70590 9.08366 9.40586 10.42277 Molecular weight = 359.11amu Principal moments of inertia in cm(-1) A = 0.008785 B = 0.004400 C = 0.003357 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3186.600965 B = 6361.986414 C = 8337.949776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.101 3.899 2 N -0.623 5.623 3 C 0.105 3.895 4 C 0.400 3.600 5 C -0.189 4.189 6 C -0.006 4.006 7 C 0.521 3.479 8 O -0.585 6.585 9 N -0.440 5.440 10 C -0.355 4.355 11 H 0.117 0.883 12 C 0.074 3.926 13 N -0.840 5.840 14 Si 0.866 3.134 15 H -0.270 1.270 16 H -0.283 1.283 17 H -0.257 1.257 18 C 0.133 3.867 19 C -0.084 4.084 20 C -0.103 4.103 21 C -0.132 4.132 22 C -0.127 4.127 23 C -0.128 4.128 24 C -0.088 4.088 25 C -0.158 4.158 26 C 0.202 3.798 27 Cl -0.040 7.040 28 N -0.536 5.536 29 H 0.075 0.925 30 H 0.057 0.943 31 H 0.056 0.944 32 H 0.043 0.957 33 H 0.075 0.925 34 H 0.059 0.941 35 H 0.139 0.861 36 H 0.279 0.721 37 H 0.076 0.924 38 H 0.085 0.915 39 H 0.124 0.876 40 H 0.115 0.885 41 H 0.113 0.887 42 H 0.117 0.883 43 H 0.125 0.875 44 H 0.188 0.812 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.678 6.552 -0.639 9.377 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.042 4.042 2 N -0.340 5.340 3 C -0.038 4.038 4 C 0.167 3.833 5 C -0.215 4.215 6 C -0.017 4.017 7 C 0.310 3.690 8 O -0.470 6.470 9 N -0.158 5.158 10 C -0.482 4.482 11 H 0.134 0.866 12 C -0.136 4.136 13 N -0.473 5.473 14 Si 0.693 3.307 15 H -0.197 1.197 16 H -0.209 1.209 17 H -0.181 1.181 18 C 0.011 3.989 19 C -0.086 4.086 20 C -0.122 4.122 21 C -0.150 4.150 22 C -0.146 4.146 23 C -0.146 4.146 24 C -0.106 4.106 25 C -0.181 4.181 26 C 0.039 3.961 27 Cl -0.011 7.011 28 N -0.257 5.257 29 H 0.094 0.906 30 H 0.075 0.925 31 H 0.075 0.925 32 H 0.062 0.938 33 H 0.093 0.907 34 H 0.078 0.922 35 H 0.157 0.843 36 H 0.090 0.910 37 H 0.093 0.907 38 H 0.103 0.897 39 H 0.142 0.858 40 H 0.133 0.867 41 H 0.132 0.868 42 H 0.135 0.865 43 H 0.143 0.857 44 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges -6.514 7.295 -0.398 9.788 hybrid contribution -0.116 -1.343 0.288 1.378 sum -6.630 5.952 -0.110 8.910 Atomic orbital electron populations 1.21626 0.78456 1.02404 1.01725 1.46031 1.04812 1.02686 1.80454 1.21494 0.97438 0.83894 1.00944 1.17674 0.86679 0.85761 0.93209 1.21448 1.01194 0.90335 1.08502 1.19972 0.92898 0.93610 0.95217 1.17958 0.86060 0.84523 0.80431 1.90633 1.20769 1.84248 1.51324 1.43522 1.11446 1.11047 1.49746 1.19327 0.83140 1.03623 1.42130 0.86586 1.25303 0.95185 0.97516 0.95638 1.69706 1.11963 1.30948 1.34717 0.87090 0.78509 0.82168 0.82926 1.19651 1.20937 1.18088 1.20701 0.96143 0.88743 0.93349 1.20196 0.94023 0.98273 0.96073 1.21166 0.95128 0.98412 0.97448 1.21030 0.99802 1.01199 0.92928 1.21038 0.95340 0.99967 0.98231 1.21082 0.95511 1.00815 0.97183 1.21163 0.99345 0.98112 0.92010 1.22954 0.94930 0.99074 1.01178 1.21112 0.86449 0.89096 0.99398 1.98376 1.08091 1.98624 1.96038 1.66005 1.06523 1.31803 1.21358 0.90642 0.92461 0.92513 0.93822 0.90654 0.92247 0.84348 0.91021 0.90663 0.89689 0.85841 0.86728 0.86847 0.86542 0.85672 0.79566 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 1.07 9.40 59.85 0.56 1.63 16 2 N -0.62 -8.66 3.39 -189.71 -0.64 -9.30 16 3 C 0.11 1.21 10.39 59.85 0.62 1.84 16 4 C 0.40 7.00 7.37 -155.06 -1.14 5.86 16 5 C -0.19 -3.51 8.93 -38.76 -0.35 -3.86 16 6 C -0.01 -0.12 5.59 -104.69 -0.59 -0.71 16 7 C 0.52 11.78 7.44 -12.26 -0.09 11.69 16 8 O -0.58 -13.78 16.33 5.31 0.09 -13.69 16 9 N -0.44 -9.95 2.13 -117.12 -0.25 -10.20 16 10 C -0.36 -8.45 6.78 -15.01 -0.10 -8.55 16 11 H 0.12 2.96 6.02 -52.49 -0.32 2.65 16 12 C 0.07 1.76 5.35 -17.44 -0.09 1.66 16 13 N -0.84 -21.00 13.95 55.50 0.77 -20.22 16 14 Si 0.87 18.78 25.00 -169.99 -4.25 14.53 16 15 H -0.27 -5.60 6.65 56.52 0.38 -5.22 16 16 H -0.28 -6.14 7.11 56.52 0.40 -5.74 16 17 H -0.26 -5.71 7.11 56.52 0.40 -5.31 16 18 C 0.13 2.78 4.48 -5.20 -0.02 2.76 16 19 C -0.08 -1.64 5.45 -104.62 -0.57 -2.21 16 20 C -0.10 -1.84 9.70 -39.58 -0.38 -2.22 16 21 C -0.13 -2.03 10.05 -39.58 -0.40 -2.43 16 22 C -0.13 -1.89 10.05 -39.58 -0.40 -2.28 16 23 C -0.13 -2.06 10.05 -39.58 -0.40 -2.45 16 24 C -0.09 -1.64 9.70 -39.58 -0.38 -2.02 16 25 C -0.16 -3.27 7.56 -38.96 -0.29 -3.57 16 26 C 0.20 3.91 7.26 -17.52 -0.13 3.78 16 27 Cl -0.04 -0.70 29.10 -51.86 -1.51 -2.21 16 28 N -0.54 -9.97 9.11 -9.60 -0.09 -10.06 16 29 H 0.07 0.58 7.79 -51.93 -0.40 0.17 16 30 H 0.06 0.60 8.10 -51.93 -0.42 0.18 16 31 H 0.06 0.60 7.73 -51.93 -0.40 0.20 16 32 H 0.04 0.48 8.14 -51.93 -0.42 0.06 16 33 H 0.07 0.98 7.44 -51.93 -0.39 0.59 16 34 H 0.06 0.52 7.92 -51.93 -0.41 0.11 16 35 H 0.14 2.40 6.65 -52.48 -0.35 2.05 16 36 H 0.28 6.56 8.31 -40.82 -0.34 6.22 16 37 H 0.08 1.59 3.10 -51.93 -0.16 1.43 16 38 H 0.08 1.75 7.21 -51.93 -0.37 1.37 16 39 H 0.12 2.21 8.06 -52.49 -0.42 1.78 16 40 H 0.11 1.46 8.06 -52.49 -0.42 1.04 16 41 H 0.11 1.35 8.06 -52.49 -0.42 0.92 16 42 H 0.12 1.60 8.06 -52.49 -0.42 1.18 16 43 H 0.13 2.44 8.06 -52.49 -0.42 2.02 16 44 H 0.19 4.14 5.29 -52.49 -0.28 3.86 16 LS Contribution 379.42 15.07 5.72 5.72 Total: -1.00 -27.48 379.42 -9.51 -36.99 By element: Atomic # 1 Polarization: 14.74 SS G_CDS: -5.20 Total: 9.54 kcal Atomic # 6 Polarization: 3.06 SS G_CDS: -4.15 Total: -1.09 kcal Atomic # 7 Polarization: -49.58 SS G_CDS: -0.21 Total: -49.79 kcal Atomic # 8 Polarization: -13.78 SS G_CDS: 0.09 Total: -13.69 kcal Atomic # 14 Polarization: 18.78 SS G_CDS: -4.25 Total: 14.53 kcal Atomic # 17 Polarization: -0.70 SS G_CDS: -1.51 Total: -2.21 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -27.48 -9.51 -36.99 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000071903499.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.726 kcal (2) G-P(sol) polarization free energy of solvation -27.479 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.247 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.511 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.990 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.736 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds