Wall clock time and date at job start Tue Mar 31 2020 06:48:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 O 1.21284 * 119.99952 * 2 1 4 4 N 1.34780 * 119.99814 * 180.02562 * 2 1 3 5 5 C 1.46495 * 119.99753 * 4.53573 * 4 2 1 6 6 C 1.50703 * 109.46848 * 84.12639 * 5 4 2 7 7 N 1.30253 * 125.62176 * 89.69171 * 6 5 4 8 8 C 1.34483 * 108.70153 * 179.83801 * 7 6 5 9 9 C 1.34331 * 107.66531 * 0.42403 * 8 7 6 10 10 C 1.50697 * 126.43945 * 179.73013 * 9 8 7 11 11 O 1.33972 * 125.61808 * 269.99858 * 6 5 4 12 12 C 1.46493 * 119.99899 * 184.54534 * 4 2 1 13 13 H 1.09002 * 110.27643 * 182.75434 * 12 4 2 14 14 C 1.54600 * 110.31039 * 60.55584 * 12 4 2 15 15 C 1.54941 * 102.91940 * 219.12529 * 14 12 4 16 16 N 1.48530 * 103.22609 * 37.41809 * 15 14 12 17 17 C 1.46906 * 110.99710 * 200.27373 * 16 15 14 18 18 C 1.52989 * 109.47376 * 287.39532 * 17 16 15 19 19 H 1.09003 * 109.47469 * 305.00066 * 18 17 16 20 20 C 1.47206 * 109.47190 * 64.99819 * 18 17 16 21 21 N 6.69858 * 155.31043 * 42.74233 * 2 1 3 22 22 C 1.52996 * 109.47364 * 184.99933 * 18 17 16 23 23 C 1.50697 * 109.47399 * 175.00145 * 22 18 17 24 24 H 1.07996 * 119.99936 * 359.97438 * 23 22 18 25 25 C 1.37887 * 120.00117 * 180.02562 * 23 22 18 26 26 N 1.31514 * 119.99579 * 359.97438 * 25 23 22 27 27 Si 1.86797 * 119.99888 * 180.02562 * 25 23 22 28 28 H 1.48502 * 109.47274 * 359.97438 * 27 25 23 29 29 H 1.48499 * 109.47371 * 119.99836 * 27 25 23 30 30 H 1.48501 * 109.46726 * 239.99897 * 27 25 23 31 31 C 1.47903 * 105.82194 * 320.78837 * 16 15 14 32 32 H 1.08997 * 109.47289 * 175.15852 * 1 2 3 33 33 H 1.08996 * 109.47344 * 55.14825 * 1 2 3 34 34 H 1.09007 * 109.46702 * 295.15739 * 1 2 3 35 35 H 1.09007 * 109.47184 * 204.11751 * 5 4 2 36 36 H 1.08997 * 109.47747 * 324.12452 * 5 4 2 37 37 H 1.07998 * 126.16739 * 180.16406 * 8 7 6 38 38 H 1.09003 * 109.47009 * 270.01499 * 10 9 8 39 39 H 1.08998 * 109.47958 * 30.01799 * 10 9 8 40 40 H 1.09006 * 109.47024 * 150.01979 * 10 9 8 41 41 H 1.08998 * 110.72639 * 337.48354 * 14 12 4 42 42 H 1.09002 * 110.72486 * 100.77214 * 14 12 4 43 43 H 1.08997 * 110.66762 * 278.97716 * 15 14 12 44 44 H 1.09000 * 110.80716 * 155.91898 * 15 14 12 45 45 H 1.09002 * 109.46661 * 47.40264 * 17 16 15 46 46 H 1.08997 * 109.46968 * 167.39234 * 17 16 15 47 47 H 1.09003 * 109.47586 * 295.00402 * 22 18 17 48 48 H 1.09001 * 109.46983 * 55.00043 * 22 18 17 49 49 H 0.97005 * 119.99342 * 180.02562 * 26 25 23 50 50 H 1.08995 * 109.91641 * 265.98053 * 31 16 15 51 51 H 1.09000 * 109.91629 * 144.68505 * 31 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1134 1.0504 0.0000 4 7 2.1809 -1.1672 -0.0005 5 6 1.4518 -2.4338 -0.1014 6 6 1.1728 -2.7388 -1.5507 7 7 1.9531 -3.4106 -2.3484 8 6 1.3730 -3.4824 -3.5595 9 6 0.2051 -2.8222 -3.4918 10 6 -0.7837 -2.6351 -4.6136 11 8 0.0841 -2.3585 -2.2325 12 6 3.6424 -1.1693 0.1000 13 1 4.0240 -2.1883 0.0360 14 6 4.0901 -0.5085 1.4240 15 6 5.3422 0.3004 1.0014 16 7 4.9803 0.8068 -0.3472 17 6 6.1797 1.1826 -1.1078 18 6 6.7616 2.4767 -0.5359 19 1 5.9922 3.2489 -0.5282 20 6 7.2310 2.2383 0.8388 21 7 7.5932 2.0549 1.8990 22 6 7.9356 2.9351 -1.4033 23 6 8.4304 4.2716 -0.9134 24 1 7.9548 4.7468 -0.0682 25 6 9.4896 4.8884 -1.5450 26 7 10.0684 4.3099 -2.5745 27 14 10.1034 6.5447 -0.9373 28 1 9.2892 6.9776 0.2268 29 1 11.5265 6.4262 -0.5300 30 1 9.9818 7.5473 -2.0260 31 6 4.2558 -0.2981 -1.0119 32 1 -0.3634 -1.0240 -0.0867 33 1 -0.3634 0.5872 -0.8433 34 1 -0.3633 0.4369 0.9303 35 1 2.0532 -3.2346 0.3290 36 1 0.5097 -2.3551 0.4411 37 1 1.7757 -3.9776 -4.4307 38 1 -0.5466 -1.7212 -5.1582 39 1 -0.7293 -3.4867 -5.2918 40 1 -1.7904 -2.5620 -4.2021 41 1 3.3137 0.1542 1.8063 42 1 4.3515 -1.2652 2.1637 43 1 6.2178 -0.3463 0.9473 44 1 5.5186 1.1280 1.6885 45 1 6.9209 0.3868 -1.0336 46 1 5.9137 1.3348 -2.1538 47 1 8.7415 2.2039 -1.3400 48 1 7.6082 3.0262 -2.4390 49 1 10.8139 4.7436 -3.0186 50 1 4.9492 -0.8911 -1.6082 51 1 3.4662 0.1043 -1.6465 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000229922661.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:48:26 Heat of formation + Delta-G solvation = 35.525445 kcal Electronic energy + Delta-G solvation = -32716.889985 eV Core-core repulsion = 28425.931652 eV Total energy + Delta-G solvation = -4290.958333 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 360.195 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -43.72191 -40.61568 -38.43500 -36.44035 -35.69423 -35.05520 -33.89930 -32.97665 -32.33180 -30.72185 -29.72503 -29.22104 -27.77698 -26.22572 -25.60907 -23.45570 -22.85093 -22.01581 -21.67418 -21.30161 -20.80849 -19.04036 -17.69440 -17.45283 -16.91363 -16.73982 -16.44164 -16.31478 -15.68530 -15.35590 -14.92804 -14.80328 -14.50654 -14.37520 -13.97568 -13.71614 -13.64729 -13.46970 -13.32771 -13.22548 -12.95934 -12.86346 -12.66479 -12.43096 -12.36367 -12.16721 -12.01920 -11.92791 -11.81717 -11.71503 -11.62090 -11.13022 -11.09903 -10.90518 -10.82938 -10.68519 -10.59308 -10.39557 -10.14060 -9.71996 -9.47213 -9.21760 -9.12633 -8.97782 -8.39943 -8.05876 -6.03824 -4.06126 0.96091 2.06921 2.22134 2.55463 2.80096 3.32825 3.40500 3.46258 3.57787 3.69566 3.76012 4.16826 4.20928 4.34473 4.45626 4.47200 4.56927 4.63392 4.71023 4.76430 4.87258 4.91927 4.93180 4.96800 5.04637 5.10922 5.17979 5.29028 5.34230 5.40786 5.42997 5.52625 5.62634 5.63335 5.69268 5.76809 5.81432 5.84685 5.90525 6.11370 6.15538 6.27205 6.41333 6.49520 6.66275 7.01638 7.17088 7.32712 7.33663 7.51501 7.61414 7.92243 8.02154 8.30603 8.52197 8.98806 9.58823 11.07261 Molecular weight = 360.19amu Principal moments of inertia in cm(-1) A = 0.014519 B = 0.002168 C = 0.002047 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1928.100090 B =12913.429687 C =13676.583161 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.502 3.498 3 O -0.487 6.487 4 N -0.608 5.608 5 C 0.209 3.791 6 C 0.161 3.839 7 N -0.463 5.463 8 C -0.044 4.044 9 C -0.042 4.042 10 C -0.070 4.070 11 O -0.198 6.198 12 C 0.140 3.860 13 H 0.097 0.903 14 C -0.127 4.127 15 C 0.032 3.968 16 N -0.497 5.497 17 C 0.055 3.945 18 C 0.010 3.990 19 H 0.110 0.890 20 C 0.252 3.748 21 N -0.484 5.484 22 C 0.032 3.968 23 C -0.522 4.522 24 H 0.057 0.943 25 C 0.061 3.939 26 N -0.893 5.893 27 Si 0.891 3.109 28 H -0.272 1.272 29 H -0.284 1.284 30 H -0.283 1.283 31 C 0.042 3.958 32 H 0.074 0.926 33 H 0.093 0.907 34 H 0.095 0.905 35 H 0.124 0.876 36 H 0.111 0.889 37 H 0.183 0.817 38 H 0.086 0.914 39 H 0.093 0.907 40 H 0.078 0.922 41 H 0.083 0.917 42 H 0.070 0.930 43 H 0.042 0.958 44 H 0.089 0.911 45 H 0.039 0.961 46 H 0.090 0.910 47 H 0.023 0.977 48 H 0.039 0.961 49 H 0.261 0.739 50 H 0.045 0.955 51 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.530 -20.316 -1.265 33.440 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.290 3.710 3 O -0.359 6.359 4 N -0.344 5.344 5 C 0.083 3.917 6 C -0.047 4.047 7 N -0.192 5.192 8 C -0.183 4.183 9 C -0.095 4.095 10 C -0.127 4.127 11 O -0.084 6.084 12 C 0.036 3.964 13 H 0.115 0.885 14 C -0.166 4.166 15 C -0.096 4.096 16 N -0.220 5.220 17 C -0.075 4.075 18 C -0.012 4.012 19 H 0.128 0.872 20 C -0.064 4.064 21 N -0.161 5.161 22 C -0.006 4.006 23 C -0.561 4.561 24 H 0.076 0.924 25 C -0.141 4.141 26 N -0.532 5.532 27 Si 0.719 3.281 28 H -0.197 1.197 29 H -0.210 1.210 30 H -0.209 1.209 31 C -0.087 4.087 32 H 0.093 0.907 33 H 0.112 0.888 34 H 0.114 0.886 35 H 0.142 0.858 36 H 0.129 0.871 37 H 0.200 0.800 38 H 0.105 0.895 39 H 0.111 0.889 40 H 0.097 0.903 41 H 0.102 0.898 42 H 0.089 0.911 43 H 0.060 0.940 44 H 0.107 0.893 45 H 0.057 0.943 46 H 0.108 0.892 47 H 0.042 0.958 48 H 0.057 0.943 49 H 0.071 0.929 50 H 0.063 0.937 51 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -25.292 -19.696 0.453 32.060 hybrid contribution 0.280 0.404 -0.742 0.890 sum -25.012 -19.291 -0.289 31.589 Atomic orbital electron populations 1.22034 0.92218 1.04155 1.05343 1.20876 0.90396 0.83408 0.76304 1.90927 1.69785 1.29924 1.45245 1.48219 1.06769 1.05095 1.74333 1.19911 0.99714 0.88417 0.83629 1.26902 0.82451 0.97413 0.97983 1.70410 1.29669 1.17376 1.01773 1.23113 0.93583 1.04653 0.96907 1.23545 1.00178 1.01035 0.84743 1.20306 0.96190 1.04086 0.92091 1.84382 1.41889 1.60932 1.21217 1.22048 0.78327 1.00028 0.95963 0.88489 1.22835 0.98717 0.99147 0.95915 1.23412 0.95387 0.98350 0.92434 1.64830 1.21134 1.34306 1.01767 1.22424 0.90260 0.96287 0.98486 1.19271 1.00567 0.97304 0.84050 0.87192 1.29143 0.91178 0.91448 0.94601 1.80977 1.11248 1.10652 1.13214 1.19166 0.90418 0.96602 0.94457 1.21200 1.15787 1.03936 1.15137 0.92438 1.24962 0.96413 0.97825 0.94881 1.69958 1.23385 1.38636 1.21193 0.86534 0.78707 0.83981 0.78863 1.19664 1.21034 1.20858 1.23002 0.98142 0.91641 0.95957 0.90694 0.88829 0.88615 0.85784 0.87120 0.79953 0.89549 0.88883 0.90272 0.89799 0.91118 0.94015 0.89313 0.94276 0.89181 0.95827 0.94325 0.92931 0.93681 0.90136 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -1.25 10.00 36.01 0.36 -0.89 16 2 C 0.50 5.49 6.56 -10.98 -0.07 5.41 16 3 O -0.49 -7.61 13.93 5.55 0.08 -7.53 16 4 N -0.61 -5.58 2.46 -165.92 -0.41 -5.99 16 5 C 0.21 1.26 5.66 -5.19 -0.03 1.23 16 6 C 0.16 1.38 7.75 -12.95 -0.10 1.28 16 7 N -0.46 -4.73 11.29 -11.10 -0.13 -4.85 16 8 C -0.04 -0.37 11.80 -17.77 -0.21 -0.58 16 9 C -0.04 -0.31 7.39 -35.69 -0.26 -0.57 16 10 C -0.07 -0.26 10.43 36.00 0.38 0.12 16 11 O -0.20 -1.67 10.24 5.37 0.05 -1.61 16 12 C 0.14 1.52 3.45 -66.57 -0.23 1.29 16 13 H 0.10 0.89 7.79 -51.93 -0.40 0.49 16 14 C -0.13 -1.55 6.31 -24.87 -0.16 -1.71 16 15 C 0.03 0.50 4.93 -1.90 -0.01 0.49 16 16 N -0.50 -7.99 4.81 -230.45 -1.11 -9.10 16 17 C 0.05 0.93 4.38 -3.83 -0.02 0.91 16 18 C 0.01 0.20 2.42 -93.41 -0.23 -0.02 16 19 H 0.11 2.25 8.14 -51.93 -0.42 1.82 16 20 C 0.25 5.48 10.85 -20.78 -0.23 5.26 16 21 N -0.48 -10.99 17.69 42.13 0.75 -10.24 16 22 C 0.03 0.79 4.42 -27.89 -0.12 0.67 16 23 C -0.52 -14.53 8.60 -34.44 -0.30 -14.82 16 24 H 0.06 1.61 7.59 -52.49 -0.40 1.21 16 25 C 0.06 1.73 5.46 -17.82 -0.10 1.64 16 26 N -0.89 -26.32 13.29 55.43 0.74 -25.58 16 27 Si 0.89 22.02 29.54 -169.99 -5.02 17.00 16 28 H -0.27 -6.69 7.11 56.52 0.40 -6.29 16 29 H -0.28 -7.01 7.11 56.52 0.40 -6.60 16 30 H -0.28 -6.83 7.11 56.52 0.40 -6.43 16 31 C 0.04 0.57 5.42 -2.75 -0.01 0.56 16 32 H 0.07 0.37 4.86 -51.93 -0.25 0.12 16 33 H 0.09 0.69 8.14 -51.93 -0.42 0.26 16 34 H 0.10 0.57 8.14 -51.92 -0.42 0.15 16 35 H 0.12 0.54 7.84 -51.93 -0.41 0.13 16 36 H 0.11 0.36 6.16 -51.93 -0.32 0.04 16 37 H 0.18 1.10 8.06 -52.49 -0.42 0.67 16 38 H 0.09 0.29 8.14 -51.93 -0.42 -0.13 16 39 H 0.09 0.17 8.14 -51.93 -0.42 -0.25 16 40 H 0.08 0.23 8.14 -51.93 -0.42 -0.19 16 41 H 0.08 1.14 6.60 -51.93 -0.34 0.80 16 42 H 0.07 0.71 8.14 -51.93 -0.42 0.29 16 43 H 0.04 0.65 7.81 -51.93 -0.41 0.25 16 44 H 0.09 1.59 5.73 -51.93 -0.30 1.29 16 45 H 0.04 0.66 7.83 -51.93 -0.41 0.25 16 46 H 0.09 1.46 8.08 -51.93 -0.42 1.04 16 47 H 0.02 0.61 8.14 -51.93 -0.42 0.19 16 48 H 0.04 0.96 8.14 -51.93 -0.42 0.54 16 49 H 0.26 7.28 8.31 -40.82 -0.34 6.94 16 50 H 0.04 0.60 7.77 -51.93 -0.40 0.20 16 51 H 0.08 1.24 6.79 -51.93 -0.35 0.89 16 LS Contribution 414.90 15.07 6.25 6.25 Total: -1.00 -35.83 414.90 -7.91 -43.73 By element: Atomic # 1 Polarization: 5.43 SS G_CDS: -7.77 Total: -2.34 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: -1.34 Total: 0.27 kcal Atomic # 7 Polarization: -55.61 SS G_CDS: -0.16 Total: -55.77 kcal Atomic # 8 Polarization: -9.28 SS G_CDS: 0.13 Total: -9.15 kcal Atomic # 14 Polarization: 22.02 SS G_CDS: -5.02 Total: 17.00 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -35.83 -7.91 -43.73 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000229922661.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.259 kcal (2) G-P(sol) polarization free energy of solvation -35.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.432 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.907 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.734 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.525 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds