Wall clock time and date at job start Tue Mar 31 2020 05:25:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53010 * 1 3 3 O 1.42901 * 109.46719 * 2 1 4 4 C 1.34944 * 116.99852 * 180.02562 * 3 2 1 5 5 O 1.21659 * 119.99618 * 359.97438 * 4 3 2 6 6 C 1.41658 * 120.00087 * 179.97438 * 4 3 2 7 7 C 1.34494 * 119.69178 * 180.24057 * 6 4 3 8 8 C 1.50699 * 119.48448 * 358.11666 * 7 6 4 9 9 N 1.37112 * 121.11870 * 178.38902 * 7 6 4 10 10 C 1.37200 * 119.50749 * 165.54916 * 9 7 6 11 11 H 1.08001 * 119.99820 * 317.84886 * 10 9 7 12 12 C 1.38956 * 120.00147 * 137.85050 * 10 9 7 13 13 N 1.31343 * 119.99892 * 335.36533 * 12 10 9 14 14 Si 1.86798 * 120.00097 * 155.36958 * 12 10 9 15 15 H 1.48499 * 109.47199 * 179.97438 * 14 12 10 16 16 H 1.48507 * 109.47264 * 299.99881 * 14 12 10 17 17 H 1.48500 * 109.47425 * 59.99916 * 14 12 10 18 18 C 1.34483 * 120.98291 * 345.27426 * 9 7 6 19 19 O 1.21234 * 119.87907 * 175.32914 * 18 9 7 20 20 C 1.50731 * 120.23433 * 355.34878 * 18 9 7 21 21 C 1.50682 * 119.72524 * 0.02562 * 6 4 3 22 22 H 1.09004 * 109.46945 * 333.30120 * 21 6 4 23 23 C 1.50703 * 109.47079 * 93.29596 * 21 6 4 24 24 C 1.38239 * 119.98768 * 59.74341 * 23 21 6 25 25 C 1.38210 * 120.01405 * 179.73023 * 24 23 21 26 26 C 1.38353 * 119.98591 * 0.54287 * 25 24 23 27 27 Cl 1.73602 * 120.01271 * 179.70473 * 26 25 24 28 28 C 1.38355 * 119.97141 * 359.72587 * 26 25 24 29 29 C 1.38209 * 119.98530 * 0.02562 * 28 26 25 30 30 H 1.08995 * 109.46773 * 299.99815 * 1 2 3 31 31 H 1.08999 * 109.47121 * 60.00254 * 1 2 3 32 32 H 1.08993 * 109.46619 * 179.97438 * 1 2 3 33 33 H 1.08995 * 109.47297 * 240.00142 * 2 1 3 34 34 H 1.08999 * 109.47121 * 119.99746 * 2 1 3 35 35 H 1.09000 * 109.47009 * 181.17780 * 8 7 6 36 36 H 1.08998 * 109.47143 * 301.18140 * 8 7 6 37 37 H 1.08999 * 109.47379 * 61.17649 * 8 7 6 38 38 H 0.96998 * 120.00410 * 352.72934 * 13 12 10 39 39 H 1.09001 * 109.49454 * 156.10008 * 20 18 9 40 40 H 1.09006 * 109.49296 * 276.17295 * 20 18 9 41 41 H 1.08008 * 119.99064 * 359.97438 * 24 23 21 42 42 H 1.08003 * 120.00636 * 180.26812 * 25 24 23 43 43 H 1.07997 * 120.00172 * 180.02562 * 28 26 25 44 44 H 1.08005 * 119.98737 * 179.97438 * 29 28 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.3441 1.5242 -0.0005 5 8 4.0852 0.5594 -0.0005 6 6 3.8855 2.8332 -0.0011 7 6 5.2198 3.0023 -0.0066 8 6 6.1206 1.7948 0.0311 9 7 5.7751 4.2555 -0.0403 10 6 7.1062 4.4129 0.2527 11 1 7.5453 3.8712 1.0774 12 6 7.8894 5.2692 -0.5117 13 7 7.5442 5.5468 -1.7482 14 14 9.4331 6.0255 0.2193 15 1 10.0856 6.8945 -0.7928 16 1 9.0712 6.8367 1.4095 17 1 10.3701 4.9462 0.6223 18 6 5.0358 5.3319 -0.3615 19 8 5.5248 6.4397 -0.3031 20 6 3.6013 5.1659 -0.7937 21 6 2.9619 4.0238 -0.0005 22 1 2.0134 3.7480 -0.4615 23 6 2.7196 4.4709 1.4181 24 6 3.7822 4.8665 2.2089 25 6 3.5600 5.2820 3.5082 26 6 2.2751 5.2912 4.0210 27 17 1.9961 5.8057 5.6554 28 6 1.2126 4.8899 3.2308 29 6 1.4356 4.4795 1.9300 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3632 -1.0276 -0.0005 33 1 1.8934 -0.5138 -0.8899 34 1 1.8934 -0.5138 0.8900 35 1 7.1615 2.1182 0.0420 36 1 5.9114 1.2133 0.9290 37 1 5.9406 1.1794 -0.8503 38 1 6.8050 5.0752 -2.1629 39 1 3.0552 6.0901 -0.6045 40 1 3.5666 4.9340 -1.8582 41 1 4.7859 4.8547 1.8099 42 1 4.3898 5.5952 4.1245 43 1 0.2094 4.8973 3.6305 44 1 0.6063 4.1658 1.3133 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000001397991.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:25:57 Heat of formation + Delta-G solvation = -83.063115 kcal Electronic energy + Delta-G solvation = -31772.180678 eV Core-core repulsion = 27487.800043 eV Total energy + Delta-G solvation = -4284.380635 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 363.107 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -41.15376 -39.70116 -38.88490 -36.83463 -36.44526 -35.65872 -34.72737 -32.34979 -31.54388 -30.89276 -30.58997 -29.49863 -27.38815 -25.60292 -23.90390 -23.15272 -22.57526 -21.97771 -20.97237 -20.81221 -18.91222 -17.39163 -17.10199 -16.36335 -16.24863 -16.05609 -15.69464 -15.48377 -15.14188 -14.82708 -14.41665 -13.97680 -13.91284 -13.48642 -13.35690 -13.19770 -13.15698 -12.87092 -12.76344 -12.68717 -12.38680 -12.07819 -11.99102 -11.81254 -11.59133 -11.54229 -11.41856 -11.20952 -11.10009 -10.93239 -10.70310 -10.50264 -10.35919 -10.27443 -10.14696 -9.93857 -9.41562 -9.13584 -8.83442 -8.71905 -8.36414 -7.57485 -6.93604 -4.51970 1.29853 1.49950 1.64289 2.23600 3.16788 3.25610 3.31819 3.34941 3.45091 3.81618 3.84128 3.97071 4.30708 4.85508 4.87946 5.00573 5.03189 5.04528 5.07279 5.12666 5.23973 5.33053 5.41201 5.53673 5.58001 5.61738 5.73305 5.77904 5.82475 5.91859 5.96329 6.04037 6.11917 6.17291 6.29551 6.33161 6.38978 6.49669 6.51613 6.70298 6.79717 6.91469 7.02498 7.11302 7.42200 7.75908 8.10535 8.35251 8.52436 8.86121 9.19374 10.30991 Molecular weight = 363.11amu Principal moments of inertia in cm(-1) A = 0.007333 B = 0.004976 C = 0.003377 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3817.475479 B = 5625.356467 C = 8289.398464 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.065 3.935 3 O -0.360 6.360 4 C 0.525 3.475 5 O -0.546 6.546 6 C -0.352 4.352 7 C 0.264 3.736 8 C -0.112 4.112 9 N -0.377 5.377 10 C -0.461 4.461 11 H 0.096 0.904 12 C 0.052 3.948 13 N -0.827 5.827 14 Si 1.078 2.922 15 H -0.277 1.277 16 H -0.278 1.278 17 H -0.281 1.281 18 C 0.485 3.515 19 O -0.482 6.482 20 C -0.136 4.136 21 C 0.027 3.973 22 H 0.096 0.904 23 C -0.060 4.060 24 C -0.100 4.100 25 C -0.107 4.107 26 C -0.042 4.042 27 Cl -0.085 7.085 28 C -0.115 4.115 29 C -0.101 4.101 30 H 0.063 0.937 31 H 0.063 0.937 32 H 0.072 0.928 33 H 0.059 0.941 34 H 0.059 0.941 35 H 0.079 0.921 36 H 0.081 0.919 37 H 0.085 0.915 38 H 0.273 0.727 39 H 0.097 0.903 40 H 0.097 0.903 41 H 0.141 0.859 42 H 0.129 0.871 43 H 0.128 0.872 44 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.111 -5.395 4.989 14.166 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.010 4.010 3 O -0.277 6.277 4 C 0.378 3.622 5 O -0.441 6.441 6 C -0.361 4.361 7 C 0.151 3.849 8 C -0.169 4.169 9 N -0.080 5.080 10 C -0.585 4.585 11 H 0.114 0.886 12 C -0.164 4.164 13 N -0.453 5.453 14 Si 0.902 3.098 15 H -0.201 1.201 16 H -0.204 1.204 17 H -0.207 1.207 18 C 0.276 3.724 19 O -0.355 6.355 20 C -0.176 4.176 21 C 0.008 3.992 22 H 0.114 0.886 23 C -0.060 4.060 24 C -0.119 4.119 25 C -0.125 4.125 26 C -0.068 4.068 27 Cl -0.057 7.057 28 C -0.134 4.134 29 C -0.119 4.119 30 H 0.083 0.917 31 H 0.082 0.918 32 H 0.091 0.909 33 H 0.078 0.922 34 H 0.077 0.923 35 H 0.098 0.902 36 H 0.100 0.900 37 H 0.104 0.896 38 H 0.084 0.916 39 H 0.116 0.884 40 H 0.115 0.885 41 H 0.158 0.842 42 H 0.147 0.853 43 H 0.146 0.854 44 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -10.416 -3.755 4.803 12.069 hybrid contribution -1.406 -1.313 0.454 1.976 sum -11.822 -5.067 5.257 13.895 Atomic orbital electron populations 1.21780 0.93424 1.02324 1.03165 1.22391 0.94645 0.82188 1.01754 1.86157 1.25403 1.30461 1.85726 1.19035 0.79605 0.89739 0.73797 1.90816 1.59230 1.43369 1.50656 1.18012 0.92067 0.91409 1.34577 1.20566 0.91972 0.88073 0.84269 1.21171 0.99069 0.93113 1.03506 1.41358 1.10244 1.02890 1.53463 1.20284 0.83477 1.35490 1.19272 0.88621 1.26489 1.02789 0.93810 0.93311 1.70633 1.26024 1.37323 1.11369 0.83394 0.73515 0.76773 0.76122 1.20147 1.20405 1.20682 1.20856 0.87645 0.84846 0.79058 1.90665 1.72760 1.24177 1.47873 1.21915 0.93483 1.00445 1.01739 1.18542 0.98572 0.91389 0.90678 0.88586 1.20134 0.92935 0.96550 0.96366 1.21490 1.00573 0.96783 0.93026 1.21036 0.95171 1.00223 0.96096 1.20874 0.95201 1.04578 0.86153 1.98340 1.96666 1.89675 1.20983 1.20926 0.97925 1.00528 0.94035 1.20971 0.96640 0.99634 0.94645 0.91745 0.91763 0.90939 0.92231 0.92265 0.90184 0.90012 0.89634 0.91641 0.88405 0.88495 0.84169 0.85278 0.85396 0.85105 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.37 10.28 37.16 0.38 -0.99 16 2 C 0.07 0.82 6.10 37.16 0.23 1.05 16 3 O -0.36 -5.58 9.13 -41.16 -0.38 -5.96 16 4 C 0.52 9.47 7.64 32.04 0.24 9.72 16 5 O -0.55 -10.65 12.55 -19.39 -0.24 -10.89 16 6 C -0.35 -6.48 4.67 -104.65 -0.49 -6.97 16 7 C 0.26 5.35 5.97 -81.55 -0.49 4.86 16 8 C -0.11 -2.15 8.03 36.01 0.29 -1.86 16 9 N -0.38 -8.49 1.34 -57.26 -0.08 -8.56 16 10 C -0.46 -11.22 7.43 -14.88 -0.11 -11.33 16 11 H 0.10 2.25 7.50 -52.49 -0.39 1.86 16 12 C 0.05 1.32 4.13 -17.49 -0.07 1.24 16 13 N -0.83 -22.47 12.42 55.49 0.69 -21.78 16 14 Si 1.08 22.84 29.99 -169.99 -5.10 17.75 16 15 H -0.28 -5.96 7.11 56.52 0.40 -5.55 16 16 H -0.28 -5.86 7.11 56.52 0.40 -5.46 16 17 H -0.28 -5.47 7.11 56.52 0.40 -5.07 16 18 C 0.48 10.93 3.92 -11.10 -0.04 10.89 16 19 O -0.48 -12.66 15.07 5.60 0.08 -12.58 16 20 C -0.14 -2.41 5.56 -27.84 -0.15 -2.57 16 21 C 0.03 0.44 2.53 -92.90 -0.24 0.21 16 22 H 0.10 1.38 7.19 -51.93 -0.37 1.01 16 23 C -0.06 -0.97 4.73 -104.62 -0.49 -1.47 16 24 C -0.10 -1.82 8.45 -39.59 -0.33 -2.15 16 25 C -0.11 -1.74 9.83 -39.55 -0.39 -2.13 16 26 C -0.04 -0.61 6.32 -39.50 -0.25 -0.86 16 27 Cl -0.09 -1.11 28.96 -51.86 -1.50 -2.62 16 28 C -0.12 -1.54 9.83 -39.55 -0.39 -1.93 16 29 C -0.10 -1.39 9.67 -39.59 -0.38 -1.77 16 30 H 0.06 0.58 8.14 -51.93 -0.42 0.16 16 31 H 0.06 0.56 8.14 -51.93 -0.42 0.14 16 32 H 0.07 0.52 8.14 -51.93 -0.42 0.10 16 33 H 0.06 0.75 8.13 -51.93 -0.42 0.33 16 34 H 0.06 0.76 8.13 -51.93 -0.42 0.34 16 35 H 0.08 1.58 6.21 -51.93 -0.32 1.25 16 36 H 0.08 1.53 7.19 -51.93 -0.37 1.16 16 37 H 0.09 1.62 7.12 -51.93 -0.37 1.25 16 38 H 0.27 7.47 7.53 -40.82 -0.31 7.17 16 39 H 0.10 1.62 8.07 -51.93 -0.42 1.20 16 40 H 0.10 1.60 8.14 -51.93 -0.42 1.18 16 41 H 0.14 2.93 4.58 -52.48 -0.24 2.69 16 42 H 0.13 1.99 8.06 -52.48 -0.42 1.57 16 43 H 0.13 1.39 8.06 -52.49 -0.42 0.97 16 44 H 0.13 1.49 7.95 -52.48 -0.42 1.07 16 LS Contribution 374.14 15.07 5.64 5.64 Total: -1.00 -28.76 374.14 -8.97 -37.73 By element: Atomic # 1 Polarization: 12.73 SS G_CDS: -5.39 Total: 7.33 kcal Atomic # 6 Polarization: -3.37 SS G_CDS: -2.69 Total: -6.06 kcal Atomic # 7 Polarization: -30.96 SS G_CDS: 0.61 Total: -30.34 kcal Atomic # 8 Polarization: -28.89 SS G_CDS: -0.54 Total: -29.43 kcal Atomic # 14 Polarization: 22.84 SS G_CDS: -5.10 Total: 17.75 kcal Atomic # 17 Polarization: -1.11 SS G_CDS: -1.50 Total: -2.62 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -28.76 -8.97 -37.73 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000001397991.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.334 kcal (2) G-P(sol) polarization free energy of solvation -28.764 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.098 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.965 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.729 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.063 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds