Wall clock time and date at job start Tue Mar 31 2020 05:30:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.39753 * 125.83975 * 2 1 4 4 C 1.36107 * 107.82800 * 180.13989 * 3 2 1 5 5 N 1.39477 * 126.21698 * 179.90020 * 4 3 2 6 6 C 1.34775 * 119.99823 * 359.68991 * 5 4 3 7 7 O 1.21294 * 120.00228 * 359.97438 * 6 5 4 8 8 C 1.50701 * 119.99922 * 179.97438 * 6 5 4 9 9 C 1.53004 * 109.46979 * 179.97438 * 8 6 5 10 10 S 1.81403 * 109.47028 * 180.02562 * 9 8 6 11 11 C 1.76201 * 102.99849 * 179.97438 * 10 9 8 12 12 C 1.38890 * 120.08725 * 359.95439 * 11 10 9 13 13 C 1.38129 * 119.94815 * 180.02562 * 12 11 10 14 14 C 1.38295 * 120.11144 * 0.02562 * 13 12 11 15 15 C 1.38298 * 120.17224 * 0.02562 * 14 13 12 16 16 C 1.38258 * 120.05674 * 359.97358 * 15 14 13 17 17 F 1.35106 * 120.05825 * 180.02562 * 16 15 14 18 18 N 1.35263 * 107.56717 * 359.63445 * 4 3 2 19 19 C 1.46505 * 126.04349 * 180.22574 * 18 4 3 20 20 C 1.50697 * 109.46803 * 90.00497 * 19 18 4 21 21 H 1.07997 * 120.00451 * 359.97438 * 20 19 18 22 22 C 1.37881 * 120.00057 * 179.97438 * 20 19 18 23 23 N 1.31523 * 119.99599 * 359.97438 * 22 20 19 24 24 Si 1.86794 * 120.00326 * 180.02562 * 22 20 19 25 25 H 1.48505 * 109.47419 * 59.99563 * 24 22 20 26 26 H 1.48495 * 109.47196 * 179.97438 * 24 22 20 27 27 H 1.48504 * 109.46925 * 299.99833 * 24 22 20 28 28 N 1.30853 * 125.83463 * 179.72883 * 2 1 3 29 29 H 1.08997 * 109.47292 * 270.24112 * 1 2 3 30 30 H 1.08998 * 109.46667 * 30.24379 * 1 2 3 31 31 H 1.09001 * 109.47127 * 150.24177 * 1 2 3 32 32 H 1.08001 * 126.08443 * 0.02562 * 3 2 1 33 33 H 0.97001 * 120.00028 * 179.68535 * 5 4 3 34 34 H 1.09000 * 109.46924 * 60.00164 * 8 6 5 35 35 H 1.08999 * 109.47011 * 299.99913 * 8 6 5 36 36 H 1.09000 * 109.47073 * 60.00360 * 9 8 6 37 37 H 1.08999 * 109.47263 * 299.99863 * 9 8 6 38 38 H 1.08004 * 120.02607 * 0.04536 * 12 11 10 39 39 H 1.07999 * 119.94866 * 180.27536 * 13 12 11 40 40 H 1.07997 * 119.90794 * 179.97438 * 14 13 12 41 41 H 1.08007 * 119.97156 * 179.97438 * 15 14 13 42 42 H 1.09001 * 109.46762 * 210.00351 * 19 18 4 43 43 H 1.08996 * 109.47318 * 330.00058 * 19 18 4 44 44 H 0.96998 * 119.99420 * 179.97438 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3253 1.1329 0.0000 4 6 3.6197 0.7121 -0.0032 5 7 4.7513 1.5274 -0.0062 6 6 4.6157 2.8683 -0.0125 7 8 3.5096 3.3660 -0.0160 8 6 5.8384 3.7492 -0.0152 9 6 5.4089 5.2177 -0.0230 10 16 6.8807 6.2782 -0.0270 11 6 6.1986 7.9028 -0.0366 12 6 4.8210 8.0795 -0.0402 13 6 4.2894 9.3544 -0.0483 14 6 5.1266 10.4552 -0.0534 15 6 6.4990 10.2847 -0.0509 16 6 7.0387 9.0118 -0.0428 17 9 8.3794 8.8453 -0.0399 18 7 3.6092 -0.6405 0.0032 19 6 4.7871 -1.5117 0.0072 20 6 5.1908 -1.8038 1.4294 21 1 4.6268 -1.3824 2.2483 22 6 6.2804 -2.6091 1.6852 23 7 6.9670 -3.1228 0.6879 24 14 6.7805 -2.9719 3.4480 25 1 5.6611 -3.6488 4.1509 26 1 7.9737 -3.8558 3.4521 27 1 7.1038 -1.6997 4.1425 28 7 2.2731 -1.0608 0.0050 29 1 -0.3634 0.0043 1.0276 30 1 -0.3632 0.8878 -0.5176 31 1 -0.3633 -0.8922 -0.5101 32 1 1.9902 2.1596 0.0004 33 1 5.6359 1.1293 -0.0037 34 1 6.4345 3.5407 -0.9036 35 1 6.4326 3.5488 0.8764 36 1 4.8126 5.4266 0.8652 37 1 4.8150 5.4178 -0.9148 38 1 4.1660 7.2208 -0.0363 39 1 3.2182 9.4919 -0.0465 40 1 4.7074 11.4505 -0.0601 41 1 7.1498 11.1467 -0.0553 42 1 4.5499 -2.4456 -0.5023 43 1 5.6084 -1.0146 -0.5089 44 1 7.7337 -3.6890 0.8679 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068219367.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:30:44 Heat of formation + Delta-G solvation = 16.897926 kcal Electronic energy + Delta-G solvation = -28256.813462 eV Core-core repulsion = 24023.476710 eV Total energy + Delta-G solvation = -4233.336752 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 363.116 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -49.21079 -40.93721 -39.35356 -39.17258 -34.84353 -33.81437 -33.38748 -32.10653 -31.68951 -30.81255 -29.22147 -28.36589 -26.09735 -25.34524 -23.57218 -23.04640 -22.75138 -21.23120 -19.79330 -19.36016 -18.37246 -17.44474 -17.11021 -16.86914 -16.68305 -16.43371 -16.18161 -15.92752 -15.51866 -15.07665 -14.66095 -14.54373 -14.50063 -14.14002 -13.81576 -13.65312 -13.35566 -12.94027 -12.88681 -12.79890 -12.66611 -12.55059 -12.43461 -12.12168 -11.84560 -11.77906 -11.60966 -11.51924 -11.12632 -10.90248 -10.57041 -10.46640 -10.36990 -10.26503 -10.00175 -9.86734 -9.58565 -9.27999 -8.74860 -7.97110 -7.77761 -7.50457 -6.36570 -4.45403 0.61364 0.73815 0.98881 1.96529 2.14736 2.78577 3.04157 3.09475 3.16106 3.21206 3.25350 3.54387 3.74486 3.80378 4.21655 4.28283 4.28987 4.48506 4.55815 4.64710 4.78913 4.82583 4.96768 5.14372 5.19295 5.31621 5.31951 5.48448 5.51726 5.57633 5.59368 5.72626 5.94274 5.99908 6.11629 6.12675 6.20591 6.36122 6.37002 6.60262 6.78978 6.99893 7.45251 7.52653 7.57343 7.75839 7.83151 8.19937 8.57475 8.66459 9.22400 10.70514 Molecular weight = 363.12amu Principal moments of inertia in cm(-1) A = 0.010579 B = 0.002117 C = 0.001828 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2646.056585 B =13226.036471 C =15313.102910 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 C 0.050 3.950 3 C -0.295 4.295 4 C 0.300 3.700 5 N -0.637 5.637 6 C 0.527 3.473 7 O -0.516 6.516 8 C -0.123 4.123 9 C -0.096 4.096 10 S -0.088 6.088 11 C -0.121 4.121 12 C -0.106 4.106 13 C -0.109 4.109 14 C -0.099 4.099 15 C -0.137 4.137 16 C 0.113 3.887 17 F -0.130 7.130 18 N -0.343 5.343 19 C 0.256 3.744 20 C -0.542 4.542 21 H 0.064 0.936 22 C 0.067 3.933 23 N -0.889 5.889 24 Si 0.907 3.093 25 H -0.273 1.273 26 H -0.283 1.283 27 H -0.274 1.274 28 N -0.284 5.284 29 H 0.068 0.932 30 H 0.069 0.931 31 H 0.066 0.934 32 H 0.161 0.839 33 H 0.418 0.582 34 H 0.110 0.890 35 H 0.112 0.888 36 H 0.101 0.899 37 H 0.101 0.899 38 H 0.138 0.862 39 H 0.134 0.866 40 H 0.135 0.865 41 H 0.140 0.860 42 H 0.057 0.943 43 H 0.044 0.956 44 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.025 24.728 -3.114 25.006 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C -0.115 4.115 3 C -0.326 4.326 4 C 0.077 3.923 5 N -0.284 5.284 6 C 0.311 3.689 7 O -0.391 6.391 8 C -0.164 4.164 9 C -0.245 4.245 10 S 0.158 5.842 11 C -0.235 4.235 12 C -0.130 4.130 13 C -0.129 4.129 14 C -0.120 4.120 15 C -0.157 4.157 16 C 0.087 3.913 17 F -0.108 7.108 18 N -0.129 5.129 19 C 0.139 3.861 20 C -0.580 4.580 21 H 0.082 0.918 22 C -0.137 4.137 23 N -0.527 5.527 24 Si 0.733 3.267 25 H -0.199 1.199 26 H -0.209 1.209 27 H -0.199 1.199 28 N -0.109 5.109 29 H 0.087 0.913 30 H 0.088 0.912 31 H 0.085 0.915 32 H 0.178 0.822 33 H 0.255 0.745 34 H 0.129 0.871 35 H 0.130 0.870 36 H 0.120 0.880 37 H 0.119 0.881 38 H 0.156 0.844 39 H 0.152 0.848 40 H 0.153 0.847 41 H 0.157 0.843 42 H 0.075 0.925 43 H 0.062 0.938 44 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -1.215 23.133 -3.165 23.380 hybrid contribution -0.003 0.634 0.980 1.167 sum -1.218 23.767 -2.186 23.899 Atomic orbital electron populations 1.20019 0.87577 1.02334 1.02160 1.22038 0.96532 0.91052 1.01876 1.21253 0.89051 1.00416 1.21927 1.17927 0.87965 0.83391 1.02989 1.42740 1.08467 1.05513 1.71668 1.20267 0.90989 0.81394 0.76206 1.90645 1.26761 1.73751 1.47945 1.21285 0.96820 0.91578 1.06729 1.23457 0.98027 0.95317 1.07650 1.85710 1.12335 0.94387 1.91759 1.21893 0.96799 0.96959 1.07845 1.21210 0.92353 0.99002 1.00404 1.21177 1.00541 0.91808 0.99357 1.21072 0.92294 0.99525 0.99087 1.21096 0.96522 0.95226 1.02896 1.17116 0.76999 0.92905 1.04263 1.91532 1.29328 1.96228 1.93711 1.49373 1.06563 1.02178 1.54758 1.19630 0.77777 0.89791 0.98934 1.21288 1.13374 1.32090 0.91270 0.91777 1.24941 0.95681 0.94823 0.98231 1.69908 1.19139 1.32425 1.31217 0.86403 0.78110 0.78534 0.83606 1.19870 1.20869 1.19944 1.77368 0.86133 1.21803 1.25643 0.91310 0.91167 0.91533 0.82165 0.74492 0.87148 0.87002 0.88032 0.88065 0.84398 0.84822 0.84730 0.84259 0.92524 0.93788 0.92061 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.90 10.44 36.01 0.38 -0.53 16 2 C 0.05 0.98 7.21 -82.44 -0.59 0.39 16 3 C -0.29 -5.85 9.58 -39.78 -0.38 -6.23 16 4 C 0.30 6.12 7.66 -153.15 -1.17 4.94 16 5 N -0.64 -10.42 5.42 -11.46 -0.06 -10.48 16 6 C 0.53 7.39 7.79 -10.99 -0.09 7.31 16 7 O -0.52 -8.43 13.11 5.55 0.07 -8.35 16 8 C -0.12 -1.20 5.71 -27.88 -0.16 -1.35 16 9 C -0.10 -0.90 3.62 37.16 0.13 -0.77 16 10 S -0.09 -0.90 21.53 -107.50 -2.31 -3.21 16 11 C -0.12 -1.23 6.11 -39.01 -0.24 -1.46 16 12 C -0.11 -0.91 9.36 -39.38 -0.37 -1.28 16 13 C -0.11 -0.75 10.04 -39.60 -0.40 -1.15 16 14 C -0.10 -0.62 10.04 -39.54 -0.40 -1.02 16 15 C -0.14 -1.03 10.02 -39.55 -0.40 -1.43 16 16 C 0.11 1.13 7.28 -39.24 -0.29 0.85 16 17 F -0.13 -1.46 16.76 2.25 0.04 -1.42 16 18 N -0.34 -7.90 3.60 -61.57 -0.22 -8.12 16 19 C 0.26 6.29 6.01 -5.19 -0.03 6.26 16 20 C -0.54 -14.34 9.39 -34.44 -0.32 -14.66 16 21 H 0.06 1.77 7.81 -52.49 -0.41 1.36 16 22 C 0.07 1.76 5.46 -17.81 -0.10 1.67 16 23 N -0.89 -24.04 13.29 55.43 0.74 -23.31 16 24 Si 0.91 20.50 29.54 -169.99 -5.02 15.48 16 25 H -0.27 -6.27 7.11 56.52 0.40 -5.87 16 26 H -0.28 -6.28 7.11 56.52 0.40 -5.88 16 27 H -0.27 -6.07 7.11 56.52 0.40 -5.67 16 28 N -0.28 -6.53 12.57 33.65 0.42 -6.11 16 29 H 0.07 0.91 8.14 -51.93 -0.42 0.49 16 30 H 0.07 0.86 8.14 -51.93 -0.42 0.44 16 31 H 0.07 0.91 8.14 -51.93 -0.42 0.49 16 32 H 0.16 3.05 5.83 -52.49 -0.31 2.75 16 33 H 0.42 6.28 7.96 -40.82 -0.33 5.96 16 34 H 0.11 0.89 8.14 -51.93 -0.42 0.47 16 35 H 0.11 0.97 8.14 -51.93 -0.42 0.55 16 36 H 0.10 0.97 7.71 -51.92 -0.40 0.57 16 37 H 0.10 0.94 7.70 -51.92 -0.40 0.54 16 38 H 0.14 1.09 5.88 -52.48 -0.31 0.78 16 39 H 0.13 0.62 8.06 -52.49 -0.42 0.20 16 40 H 0.13 0.48 8.06 -52.49 -0.42 0.05 16 41 H 0.14 0.75 8.06 -52.48 -0.42 0.33 16 42 H 0.06 1.50 8.14 -51.93 -0.42 1.08 16 43 H 0.04 1.04 7.50 -51.93 -0.39 0.65 16 44 H 0.27 6.92 8.31 -40.82 -0.34 6.58 16 LS Contribution 394.58 15.07 5.95 5.95 Total: -1.00 -31.88 394.58 -10.30 -42.18 By element: Atomic # 1 Polarization: 11.34 SS G_CDS: -5.48 Total: 5.86 kcal Atomic # 6 Polarization: -4.05 SS G_CDS: -4.42 Total: -8.47 kcal Atomic # 7 Polarization: -48.88 SS G_CDS: 0.88 Total: -48.01 kcal Atomic # 8 Polarization: -8.43 SS G_CDS: 0.07 Total: -8.35 kcal Atomic # 9 Polarization: -1.46 SS G_CDS: 0.04 Total: -1.42 kcal Atomic # 14 Polarization: 20.50 SS G_CDS: -5.02 Total: 15.48 kcal Atomic # 16 Polarization: -0.90 SS G_CDS: -2.31 Total: -3.21 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -31.88 -10.30 -42.18 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068219367.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 59.075 kcal (2) G-P(sol) polarization free energy of solvation -31.876 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.301 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.177 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.898 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds