Wall clock time and date at job start Tue Mar 31 2020 05:52:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 C 1.46896 * 111.00058 * 2 1 4 4 C 1.46902 * 111.00219 * 123.95369 * 2 1 3 5 5 C 1.52998 * 109.46850 * 66.04788 * 4 2 1 6 6 C 1.52999 * 109.47235 * 180.02562 * 5 4 2 7 7 N 1.46494 * 109.47357 * 179.97438 * 6 5 4 8 8 C 1.46501 * 120.00193 * 269.99951 * 7 6 5 9 9 C 1.50700 * 109.47233 * 262.73662 * 8 7 6 10 10 H 1.07997 * 120.00071 * 359.97438 * 9 8 7 11 11 C 1.37879 * 119.99982 * 180.02562 * 9 8 7 12 12 N 1.31512 * 120.00324 * 359.97438 * 11 9 8 13 13 Si 1.86807 * 119.99870 * 179.97438 * 11 9 8 14 14 H 1.48505 * 109.46969 * 89.99816 * 13 11 9 15 15 H 1.48498 * 109.46881 * 209.99503 * 13 11 9 16 16 H 1.48502 * 109.47134 * 329.99701 * 13 11 9 17 17 C 1.34778 * 120.00055 * 89.99990 * 7 6 5 18 18 O 1.21656 * 119.99628 * 2.39051 * 17 7 6 19 19 C 1.47023 * 120.00041 * 182.38537 * 17 7 6 20 20 C 1.35882 * 125.43092 * 168.19241 * 19 17 7 21 21 C 1.41575 * 107.73342 * 180.02562 * 20 19 17 22 22 C 1.40121 * 133.35247 * 180.02562 * 21 20 19 23 23 C 1.36415 * 119.84655 * 179.72969 * 22 21 20 24 24 C 1.39066 * 120.59908 * 0.52133 * 23 22 21 25 25 Cl 1.73604 * 119.68930 * 179.72903 * 24 23 22 26 26 C 1.37800 * 120.61836 * 359.45497 * 24 23 22 27 27 C 1.39194 * 119.80106 * 0.27388 * 26 24 23 28 28 N 1.37489 * 133.15916 * 179.97438 * 27 26 24 29 29 H 0.96999 * 125.61058 * 359.96664 * 28 27 26 30 30 H 1.09004 * 109.46529 * 296.04467 * 1 2 3 31 31 H 1.08996 * 109.46783 * 56.04383 * 1 2 3 32 32 H 1.09002 * 109.46897 * 176.04369 * 1 2 3 33 33 H 1.08999 * 109.47728 * 183.95668 * 3 2 1 34 34 H 1.09000 * 109.47718 * 303.95785 * 3 2 1 35 35 H 1.09000 * 109.47384 * 63.95386 * 3 2 1 36 36 H 1.08998 * 109.47186 * 306.04839 * 4 2 1 37 37 H 1.09003 * 109.47247 * 186.04568 * 4 2 1 38 38 H 1.08998 * 109.47668 * 59.99835 * 5 4 2 39 39 H 1.09003 * 109.47016 * 299.99921 * 5 4 2 40 40 H 1.09008 * 109.46956 * 59.99863 * 6 5 4 41 41 H 1.08998 * 109.47080 * 300.00325 * 6 5 4 42 42 H 1.08996 * 109.47091 * 22.73368 * 8 7 6 43 43 H 1.09004 * 109.47060 * 142.73841 * 8 7 6 44 44 H 0.97001 * 120.00372 * 180.02562 * 12 11 9 45 45 H 1.08001 * 126.13441 * 0.02562 * 20 19 17 46 46 H 1.07999 * 120.07947 * 359.97138 * 22 21 20 47 47 H 1.07991 * 119.69875 * 180.27207 * 23 22 21 48 48 H 1.08000 * 120.09977 * 180.29609 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9955 -0.7660 1.1376 5 6 1.6316 -2.2426 0.9703 6 6 2.1794 -3.0403 2.1554 7 7 1.8304 -4.4541 1.9955 8 6 0.5734 -4.9653 2.5477 9 6 0.8359 -5.6031 3.8876 10 1 1.8387 -5.6258 4.2876 11 6 -0.2042 -6.1586 4.6023 12 7 -1.4254 -6.1315 4.1149 13 14 0.1214 -6.9499 6.2629 14 1 -0.0164 -5.9294 7.3329 15 1 -0.8585 -8.0420 6.4913 16 1 1.4977 -7.5070 6.2844 17 6 2.6657 -5.2845 1.3404 18 8 3.7293 -4.8700 0.9198 19 6 2.2915 -6.6913 1.1342 20 6 2.9269 -7.5623 0.3071 21 6 2.2584 -8.8071 0.3960 22 6 2.4585 -10.0522 -0.2148 23 6 1.6310 -11.0951 0.0826 24 6 0.5813 -10.9322 0.9802 25 17 -0.4617 -12.2736 1.3362 26 6 0.3647 -9.7176 1.5939 27 6 1.1995 -8.6405 1.3101 28 7 1.2372 -7.3384 1.7499 29 1 0.6242 -6.9395 2.3871 30 1 -0.3632 0.4513 0.9234 31 1 -0.3633 0.5740 -0.8524 32 1 -0.3633 -1.0252 -0.0709 33 1 3.0828 1.3433 -0.0709 34 1 1.5898 1.9164 -0.8524 35 1 1.7045 1.8723 0.9233 36 1 1.5612 -0.3873 2.0628 37 1 3.0798 -0.6611 1.1756 38 1 2.0659 -2.6214 0.0451 39 1 0.5473 -2.3475 0.9323 40 1 1.7446 -2.6615 3.0804 41 1 3.2636 -2.9354 2.1939 42 1 -0.1314 -4.1427 2.6687 43 1 0.1531 -5.7070 1.8683 44 1 -2.1571 -6.5219 4.6179 45 1 3.7874 -7.3441 -0.3079 46 1 3.2683 -10.1870 -0.9165 47 1 1.7900 -12.0549 -0.3862 48 1 -0.4501 -9.6017 2.2932 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000069841627.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:52:25 Heat of formation + Delta-G solvation = 30.564685 kcal Electronic energy + Delta-G solvation = -30407.550638 eV Core-core repulsion = 26296.223121 eV Total energy + Delta-G solvation = -4111.327518 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 363.145 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -41.25995 -39.10552 -37.66872 -37.01198 -35.79719 -35.47064 -33.38838 -31.82627 -31.63536 -29.25703 -28.54085 -27.75682 -27.61016 -26.14368 -23.88414 -23.34777 -22.22184 -21.60881 -20.79184 -20.39790 -19.12473 -17.28936 -17.15757 -16.69486 -16.04231 -15.64591 -15.46886 -15.07527 -15.00289 -14.80953 -14.50289 -14.36406 -14.14883 -13.79601 -13.74398 -13.43062 -12.92965 -12.84650 -12.70066 -12.48873 -12.42783 -12.21761 -11.88874 -11.81947 -11.67972 -11.61150 -11.38019 -11.29111 -11.16955 -11.09310 -10.92537 -10.65327 -10.59568 -10.49599 -10.25693 -10.10756 -9.52987 -9.44829 -8.97940 -8.40992 -8.09398 -7.85998 -7.34562 -6.60159 -4.74517 1.04315 1.83361 2.31811 2.48687 3.01830 3.11332 3.14836 3.48287 3.72418 3.92197 3.99802 4.05904 4.09870 4.70856 4.93977 5.00262 5.07290 5.08779 5.21901 5.30902 5.32715 5.47528 5.51301 5.57030 5.57671 5.65239 5.65638 5.73570 5.73849 5.80264 5.91316 5.92262 6.01643 6.14590 6.23651 6.27147 6.36510 6.47024 6.51229 6.65753 6.72476 6.84671 6.97127 6.99504 7.01902 7.17985 7.36136 7.43199 7.54053 7.96153 8.19026 8.39790 8.69889 8.97436 10.42258 Molecular weight = 363.15amu Principal moments of inertia in cm(-1) A = 0.009615 B = 0.002927 C = 0.002478 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2911.566176 B = 9565.095471 C =11294.889511 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 N -0.548 5.548 3 C 0.025 3.975 4 C 0.059 3.941 5 C -0.130 4.130 6 C 0.122 3.878 7 N -0.591 5.591 8 C 0.216 3.784 9 C -0.563 4.563 10 H 0.071 0.929 11 C 0.068 3.932 12 N -0.879 5.879 13 Si 0.897 3.103 14 H -0.273 1.273 15 H -0.279 1.279 16 H -0.268 1.268 17 C 0.582 3.418 18 O -0.550 6.550 19 C 0.049 3.951 20 C -0.142 4.142 21 C -0.118 4.118 22 C -0.054 4.054 23 C -0.148 4.148 24 C -0.019 4.019 25 Cl -0.082 7.082 26 C -0.108 4.108 27 C 0.106 3.894 28 N -0.544 5.544 29 H 0.455 0.545 30 H 0.025 0.975 31 H 0.064 0.936 32 H 0.073 0.927 33 H 0.067 0.933 34 H 0.065 0.935 35 H 0.023 0.977 36 H 0.035 0.965 37 H 0.075 0.925 38 H 0.073 0.927 39 H 0.065 0.935 40 H 0.078 0.922 41 H 0.078 0.922 42 H 0.050 0.950 43 H 0.040 0.960 44 H 0.275 0.725 45 H 0.150 0.850 46 H 0.128 0.872 47 H 0.127 0.873 48 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.282 1.606 -6.419 6.999 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 N -0.272 5.272 3 C -0.123 4.123 4 C -0.069 4.069 5 C -0.169 4.169 6 C -0.002 4.002 7 N -0.320 5.320 8 C 0.095 3.905 9 C -0.602 4.602 10 H 0.089 0.911 11 C -0.139 4.139 12 N -0.515 5.515 13 Si 0.723 3.277 14 H -0.198 1.198 15 H -0.204 1.204 16 H -0.192 1.192 17 C 0.370 3.630 18 O -0.429 6.429 19 C -0.064 4.064 20 C -0.169 4.169 21 C -0.123 4.123 22 C -0.073 4.073 23 C -0.168 4.168 24 C -0.047 4.047 25 Cl -0.053 7.053 26 C -0.129 4.129 27 C -0.008 4.008 28 N -0.161 5.161 29 H 0.315 0.685 30 H 0.043 0.957 31 H 0.083 0.917 32 H 0.092 0.908 33 H 0.086 0.914 34 H 0.084 0.916 35 H 0.042 0.958 36 H 0.053 0.947 37 H 0.094 0.906 38 H 0.092 0.908 39 H 0.083 0.917 40 H 0.097 0.903 41 H 0.097 0.903 42 H 0.068 0.932 43 H 0.057 0.943 44 H 0.085 0.915 45 H 0.168 0.832 46 H 0.146 0.854 47 H 0.145 0.855 48 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 2.530 1.629 -6.801 7.437 hybrid contribution -0.852 0.050 2.175 2.337 sum 1.678 1.679 -4.626 5.199 Atomic orbital electron populations 1.22446 0.87396 1.02748 1.00149 1.61965 1.08099 1.13480 1.43644 1.22366 1.00768 0.88981 1.00215 1.22066 1.00184 0.93712 0.90959 1.21962 1.01585 0.93447 0.99940 1.21286 1.01035 0.80192 0.97645 1.48056 1.22172 1.08467 1.53317 1.19860 0.80836 0.96227 0.93599 1.21635 0.95698 1.39047 1.03807 0.91061 1.25075 0.94648 0.95498 0.98632 1.69914 0.99618 1.43134 1.38846 0.86454 0.78960 0.79306 0.83003 1.19838 1.20385 1.19203 1.17223 0.83751 0.83694 0.78364 1.90748 1.23152 1.76599 1.52410 1.20239 0.92649 0.93623 0.99931 1.20697 1.02153 0.90838 1.03167 1.18276 0.98069 0.94829 1.01107 1.20213 0.98384 0.90471 0.98247 1.20321 0.96081 0.99773 1.00653 1.20333 0.95138 0.88310 1.00901 1.98337 1.66695 1.45943 1.94314 1.19873 1.00732 0.89859 1.02398 1.18248 0.97779 0.86581 0.98218 1.44555 1.26699 1.07443 1.37440 0.68458 0.95664 0.91692 0.90791 0.91387 0.91581 0.95839 0.94677 0.90609 0.90805 0.91679 0.90339 0.90344 0.93190 0.94292 0.91538 0.83203 0.85370 0.85479 0.85039 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.23 9.32 60.07 0.56 0.79 16 2 N -0.55 -6.71 5.02 -251.26 -1.26 -7.98 16 3 C 0.03 0.25 9.57 60.06 0.57 0.82 16 4 C 0.06 0.75 4.96 -3.82 -0.02 0.73 16 5 C -0.13 -1.95 5.46 -26.73 -0.15 -2.09 16 6 C 0.12 2.06 5.39 -4.05 -0.02 2.03 16 7 N -0.59 -11.76 2.48 -176.48 -0.44 -12.20 16 8 C 0.22 4.68 4.72 -5.19 -0.02 4.66 16 9 C -0.56 -13.25 7.32 -34.44 -0.25 -13.50 16 10 H 0.07 1.76 7.81 -52.49 -0.41 1.35 16 11 C 0.07 1.61 5.06 -17.82 -0.09 1.52 16 12 N -0.88 -21.50 13.29 55.43 0.74 -20.76 16 13 Si 0.90 19.12 29.54 -169.99 -5.02 14.10 16 14 H -0.27 -5.79 7.11 56.52 0.40 -5.39 16 15 H -0.28 -5.90 7.11 56.52 0.40 -5.50 16 16 H -0.27 -5.82 7.11 56.52 0.40 -5.42 16 17 C 0.58 12.19 7.57 -12.70 -0.10 12.09 16 18 O -0.55 -12.10 16.43 5.23 0.09 -12.01 16 19 C 0.05 1.00 6.56 -82.29 -0.54 0.46 16 20 C -0.14 -2.59 10.55 -39.15 -0.41 -3.00 16 21 C -0.12 -2.06 6.16 -106.92 -0.66 -2.71 16 22 C -0.05 -0.78 10.06 -39.53 -0.40 -1.18 16 23 C -0.15 -2.06 9.74 -39.93 -0.39 -2.44 16 24 C -0.02 -0.29 6.32 -39.43 -0.25 -0.54 16 25 Cl -0.08 -1.13 28.93 -51.86 -1.50 -2.63 16 26 C -0.11 -1.89 9.84 -39.39 -0.39 -2.28 16 27 C 0.11 2.03 7.25 -83.98 -0.61 1.42 16 28 N -0.54 -11.32 4.85 -7.36 -0.04 -11.35 16 29 H 0.45 10.06 3.22 -40.82 -0.13 9.92 16 30 H 0.02 0.27 8.14 -51.93 -0.42 -0.15 16 31 H 0.06 0.63 8.12 -51.93 -0.42 0.21 16 32 H 0.07 0.89 6.47 -51.93 -0.34 0.55 16 33 H 0.07 0.63 8.12 -51.93 -0.42 0.20 16 34 H 0.07 0.57 8.12 -51.93 -0.42 0.15 16 35 H 0.02 0.22 8.14 -51.93 -0.42 -0.21 16 36 H 0.03 0.43 8.12 -51.93 -0.42 0.01 16 37 H 0.08 0.92 8.06 -51.93 -0.42 0.50 16 38 H 0.07 1.23 8.14 -51.93 -0.42 0.80 16 39 H 0.06 1.00 6.55 -51.93 -0.34 0.66 16 40 H 0.08 1.27 8.07 -51.92 -0.42 0.86 16 41 H 0.08 1.33 7.39 -51.93 -0.38 0.94 16 42 H 0.05 1.12 8.02 -51.93 -0.42 0.70 16 43 H 0.04 0.90 5.13 -51.93 -0.27 0.63 16 44 H 0.27 6.44 8.31 -40.82 -0.34 6.10 16 45 H 0.15 2.44 8.06 -52.49 -0.42 2.01 16 46 H 0.13 1.45 8.06 -52.49 -0.42 1.03 16 47 H 0.13 1.43 8.06 -52.49 -0.42 1.00 16 48 H 0.13 2.30 8.06 -52.49 -0.42 1.88 16 LS Contribution 405.88 15.07 6.12 6.12 Total: -1.00 -25.69 405.88 -11.38 -37.07 By element: Atomic # 1 Polarization: 19.75 SS G_CDS: -6.90 Total: 12.85 kcal Atomic # 6 Polarization: -0.05 SS G_CDS: -3.16 Total: -3.20 kcal Atomic # 7 Polarization: -51.29 SS G_CDS: -1.00 Total: -52.29 kcal Atomic # 8 Polarization: -12.10 SS G_CDS: 0.09 Total: -12.01 kcal Atomic # 14 Polarization: 19.12 SS G_CDS: -5.02 Total: 14.10 kcal Atomic # 17 Polarization: -1.13 SS G_CDS: -1.50 Total: -2.63 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -25.69 -11.38 -37.07 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000069841627.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.634 kcal (2) G-P(sol) polarization free energy of solvation -25.691 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.378 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.069 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.565 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds