Wall clock time and date at job start Tue Mar 31 2020 05:26:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 N 1.31129 * 126.55251 * 2 1 4 4 C 1.34497 * 105.61236 * 180.26039 * 3 2 1 5 5 C 1.50696 * 126.28358 * 179.97438 * 4 3 2 6 6 H 1.09002 * 109.88471 * 13.94113 * 5 4 3 7 7 C 1.54326 * 109.88710 * 252.74127 * 5 4 3 8 8 C 1.55144 * 103.01914 * 218.31184 * 7 5 4 9 9 C 1.54904 * 101.65162 * 35.65325 * 8 7 5 10 10 N 1.47440 * 109.89075 * 134.97513 * 5 4 3 11 11 C 1.46902 * 110.99737 * 356.14660 * 10 5 4 12 12 C 1.50703 * 109.47183 * 190.00217 * 11 10 5 13 13 C 1.38116 * 120.02742 * 259.72250 * 12 11 10 14 14 C 1.38382 * 120.05605 * 179.78940 * 13 12 11 15 15 Cl 1.73605 * 119.94662 * 180.23075 * 14 13 12 16 16 C 1.38431 * 120.11374 * 0.46439 * 14 13 12 17 17 C 1.38075 * 120.05380 * 359.79192 * 16 14 13 18 18 C 1.38857 * 120.02989 * 79.99900 * 12 11 10 19 19 O 1.35758 * 120.05420 * 359.97438 * 18 12 11 20 20 C 1.34824 * 116.99800 * 174.37521 * 19 18 12 21 21 H 1.08000 * 120.00428 * 5.06948 * 20 19 18 22 22 C 1.38651 * 120.00252 * 185.06781 * 20 19 18 23 23 N 1.31562 * 120.00196 * 180.02562 * 22 20 19 24 24 Si 1.86804 * 119.99863 * 0.02562 * 22 20 19 25 25 H 1.48500 * 109.46886 * 90.00142 * 24 22 20 26 26 H 1.48500 * 109.47261 * 210.00303 * 24 22 20 27 27 H 1.48499 * 109.47037 * 330.00468 * 24 22 20 28 28 N 1.29945 * 107.42416 * 359.97438 * 4 3 2 29 29 O 1.21298 * 110.25492 * 359.97438 * 28 4 3 30 30 H 1.08998 * 109.47418 * 179.71147 * 1 2 3 31 31 H 1.09006 * 109.46998 * 299.72235 * 1 2 3 32 32 H 1.09007 * 109.46485 * 59.71259 * 1 2 3 33 33 H 1.08999 * 110.70747 * 336.69540 * 7 5 4 34 34 H 1.09003 * 110.70194 * 99.92869 * 7 5 4 35 35 H 1.09004 * 110.98922 * 277.56021 * 8 7 5 36 36 H 1.09000 * 110.98816 * 153.74475 * 8 7 5 37 37 H 1.08996 * 110.37402 * 204.09788 * 9 8 7 38 38 H 1.09003 * 110.37521 * 81.75740 * 9 8 7 39 39 H 1.08997 * 109.47065 * 309.99661 * 11 10 5 40 40 H 1.08998 * 109.47224 * 69.99876 * 11 10 5 41 41 H 1.08005 * 119.96754 * 0.02562 * 13 12 11 42 42 H 1.07998 * 119.97221 * 179.76705 * 16 14 13 43 43 H 1.07997 * 120.02468 * 179.97438 * 17 16 14 44 44 H 0.97001 * 119.99604 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2880 1.0534 0.0000 4 6 3.5441 0.5727 -0.0059 5 6 4.8112 1.3885 -0.0088 6 1 4.5853 2.4251 0.2413 7 6 5.4803 1.3139 -1.3975 8 6 6.9918 1.2475 -1.0539 9 6 6.9810 0.4003 0.2429 10 7 5.7671 0.8339 0.9670 11 6 5.1709 -0.2834 1.7114 12 6 6.0741 -0.6630 2.8566 13 6 6.9133 -1.7540 2.7427 14 6 7.7460 -2.1004 3.7922 15 17 8.8041 -3.4688 3.6437 16 6 7.7334 -1.3606 4.9622 17 6 6.8925 -0.2722 5.0830 18 6 6.0592 0.0805 4.0292 19 8 5.2315 1.1503 4.1455 20 6 5.1809 1.7571 5.3485 21 1 5.8419 1.4400 6.1415 22 6 4.2803 2.7883 5.5675 23 7 4.2314 3.3807 6.7412 24 14 3.1365 3.3364 4.1961 25 1 1.8758 2.5543 4.2609 26 1 2.8315 4.7812 4.3536 27 1 3.7929 3.1093 2.8836 28 7 3.4644 -0.7243 -0.0086 29 8 2.3029 -1.0737 -0.0044 30 1 -0.3634 -1.0276 -0.0052 31 1 -0.3633 0.5095 0.8925 32 1 -0.3632 0.5183 -0.8875 33 1 5.1661 0.4156 -1.9290 34 1 5.2567 2.2067 -1.9815 35 1 7.3937 2.2432 -0.8665 36 1 7.5500 0.7451 -1.8439 37 1 7.8712 0.6053 0.8375 38 1 6.9204 -0.6611 0.0023 39 1 4.1980 0.0171 2.1003 40 1 5.0482 -1.1385 1.0467 41 1 6.9223 -2.3350 1.8322 42 1 8.3815 -1.6353 5.7812 43 1 6.8827 0.3044 5.9961 44 1 3.6010 4.1019 6.8944 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000076016943.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:26:49 Heat of formation + Delta-G solvation = 86.546667 kcal Electronic energy + Delta-G solvation = -31346.723177 eV Core-core repulsion = 27101.990126 eV Total energy + Delta-G solvation = -4244.733051 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 363.114 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -45.61983 -39.87711 -38.86575 -36.93623 -35.76957 -35.58586 -33.59933 -32.97216 -32.40582 -30.12873 -29.35277 -28.93915 -28.75783 -25.49837 -25.12680 -24.07209 -22.77467 -21.69017 -21.51298 -20.69252 -19.89855 -18.15410 -17.97892 -17.66314 -17.03092 -16.00123 -15.92105 -15.32604 -15.24290 -14.71270 -14.47795 -14.10765 -13.93778 -13.85480 -13.65180 -13.55364 -13.29407 -12.98984 -12.73000 -12.57921 -12.45124 -12.32582 -12.20397 -12.01085 -11.89706 -11.56480 -11.28236 -11.16658 -11.12734 -11.04375 -10.99321 -10.79118 -10.70423 -10.45948 -10.36755 -10.18494 -9.73766 -9.42684 -8.90001 -8.40564 -8.14411 -7.35839 -6.48620 -4.13611 1.14193 1.85593 2.00222 2.21577 2.74589 2.80483 3.19803 3.24121 3.44821 3.55221 3.87217 4.14772 4.21297 4.40425 4.58363 4.68631 4.75301 4.78478 5.00377 5.03913 5.06643 5.12039 5.27694 5.35983 5.40452 5.45076 5.47701 5.62035 5.67744 5.72190 5.78924 5.82137 5.91833 5.99447 6.04471 6.09764 6.17427 6.18148 6.30689 6.56863 6.76313 6.84635 7.05266 7.09979 7.22496 7.39776 7.68780 7.93838 8.17869 8.86508 9.47998 10.58010 Molecular weight = 363.11amu Principal moments of inertia in cm(-1) A = 0.006746 B = 0.005102 C = 0.003594 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 4149.847892 B = 5486.557191 C = 7788.203620 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.171 3.829 3 N -0.476 5.476 4 C 0.166 3.834 5 C 0.161 3.839 6 H 0.117 0.883 7 C -0.129 4.129 8 C -0.126 4.126 9 C 0.044 3.956 10 N -0.498 5.498 11 C 0.106 3.894 12 C -0.148 4.148 13 C -0.056 4.056 14 C -0.120 4.120 15 Cl -0.105 7.105 16 C -0.059 4.059 17 C -0.215 4.215 18 C 0.183 3.817 19 O -0.192 6.192 20 C -0.390 4.390 21 H 0.107 0.893 22 C 0.069 3.931 23 N -0.873 5.873 24 Si 0.898 3.102 25 H -0.277 1.277 26 H -0.282 1.282 27 H -0.249 1.249 28 N -0.376 5.376 29 O 0.072 5.928 30 H 0.095 0.905 31 H 0.103 0.897 32 H 0.102 0.898 33 H 0.068 0.932 34 H 0.082 0.918 35 H 0.080 0.920 36 H 0.076 0.924 37 H 0.087 0.913 38 H 0.047 0.953 39 H 0.070 0.930 40 H 0.066 0.934 41 H 0.119 0.881 42 H 0.120 0.880 43 H 0.142 0.858 44 H 0.280 0.720 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.356 -7.014 -15.559 17.229 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.049 4.049 3 N -0.210 5.210 4 C -0.107 4.107 5 C 0.051 3.949 6 H 0.134 0.866 7 C -0.168 4.168 8 C -0.164 4.164 9 C -0.084 4.084 10 N -0.222 5.222 11 C -0.021 4.021 12 C -0.150 4.150 13 C -0.076 4.076 14 C -0.147 4.147 15 Cl -0.077 7.077 16 C -0.078 4.078 17 C -0.234 4.234 18 C 0.128 3.872 19 O -0.095 6.095 20 C -0.465 4.465 21 H 0.124 0.876 22 C -0.136 4.136 23 N -0.510 5.510 24 Si 0.723 3.277 25 H -0.203 1.203 26 H -0.207 1.207 27 H -0.172 1.172 28 N -0.085 5.085 29 O 0.014 5.986 30 H 0.114 0.886 31 H 0.121 0.879 32 H 0.120 0.880 33 H 0.087 0.913 34 H 0.100 0.900 35 H 0.099 0.901 36 H 0.095 0.905 37 H 0.105 0.895 38 H 0.066 0.934 39 H 0.088 0.912 40 H 0.084 0.916 41 H 0.137 0.863 42 H 0.138 0.862 43 H 0.159 0.841 44 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -1.635 -6.518 -15.214 16.632 hybrid contribution -0.811 -0.438 -0.589 1.094 sum -2.445 -6.956 -15.803 17.438 Atomic orbital electron populations 1.20371 0.80396 1.05451 1.05630 1.28783 0.98877 0.80852 0.96388 1.71868 1.00200 1.28944 1.19977 1.26312 0.95656 0.88378 1.00382 1.21123 0.83294 0.97950 0.92576 0.86559 1.22833 0.95900 1.02757 0.95334 1.22712 0.95080 1.01377 0.97265 1.23127 0.94210 0.97478 0.93583 1.64029 1.03963 1.32093 1.22105 1.21325 0.96065 0.91812 0.92882 1.18653 1.03541 0.97847 0.94981 1.20359 0.94166 0.95956 0.97073 1.20273 1.01581 0.94920 0.97916 1.98282 1.66235 1.44935 1.98218 1.20680 0.97691 0.93955 0.95489 1.21216 1.00576 1.00453 1.01184 1.18871 0.89619 0.86266 0.92444 1.83641 1.54998 1.36238 1.34599 1.20804 1.22118 1.16192 0.87385 0.87561 1.24444 0.96929 0.95186 0.97011 1.69648 1.36381 1.23450 1.21529 0.86268 0.80566 0.77641 0.83206 1.20271 1.20737 1.17190 1.74809 0.96995 1.15520 1.21193 1.85293 1.11664 1.35947 1.65670 0.88582 0.87857 0.87998 0.91312 0.89979 0.90086 0.90537 0.89506 0.93435 0.91204 0.91604 0.86309 0.86205 0.84080 0.90946 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.42 10.51 36.01 0.38 -0.04 16 2 C 0.17 2.17 8.51 -13.06 -0.11 2.05 16 3 N -0.48 -7.56 11.55 -9.87 -0.11 -7.67 16 4 C 0.17 2.72 5.24 -156.37 -0.82 1.90 16 5 C 0.16 2.54 3.96 -67.88 -0.27 2.27 16 6 H 0.12 1.96 8.14 -51.93 -0.42 1.54 16 7 C -0.13 -1.55 6.46 -24.90 -0.16 -1.71 16 8 C -0.13 -1.43 7.08 -24.59 -0.17 -1.60 16 9 C 0.04 0.62 6.00 -2.30 -0.01 0.61 16 10 N -0.50 -8.72 5.15 -226.16 -1.17 -9.89 16 11 C 0.11 2.00 3.14 -4.97 -0.02 1.98 16 12 C -0.15 -2.94 4.94 -104.44 -0.52 -3.46 16 13 C -0.06 -0.99 9.23 -39.57 -0.37 -1.35 16 14 C -0.12 -2.10 6.32 -39.46 -0.25 -2.35 16 15 Cl -0.10 -1.60 28.95 -51.86 -1.50 -3.10 16 16 C -0.06 -1.08 9.82 -39.57 -0.39 -1.47 16 17 C -0.21 -4.55 9.17 -39.40 -0.36 -4.91 16 18 C 0.18 4.15 6.62 -39.11 -0.26 3.89 16 19 O -0.19 -4.95 7.82 0.04 0.00 -4.95 16 20 C -0.39 -10.74 9.95 30.88 0.31 -10.43 16 21 H 0.11 2.98 5.44 -52.49 -0.29 2.70 16 22 C 0.07 1.91 5.49 -17.51 -0.10 1.81 16 23 N -0.87 -24.89 13.96 55.48 0.77 -24.11 16 24 Si 0.90 21.84 28.62 -169.99 -4.86 16.97 16 25 H -0.28 -6.67 7.11 56.52 0.40 -6.27 16 26 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 27 H -0.25 -6.15 7.11 56.52 0.40 -5.75 16 28 N -0.38 -5.97 8.70 30.90 0.27 -5.70 16 29 O 0.07 1.00 11.31 18.10 0.20 1.21 16 30 H 0.10 0.43 8.14 -51.93 -0.42 0.01 16 31 H 0.10 0.70 8.14 -51.93 -0.42 0.28 16 32 H 0.10 0.52 8.14 -51.93 -0.42 0.10 16 33 H 0.07 0.83 7.84 -51.93 -0.41 0.43 16 34 H 0.08 0.85 8.14 -51.93 -0.42 0.43 16 35 H 0.08 0.89 8.14 -51.93 -0.42 0.47 16 36 H 0.08 0.71 8.14 -51.93 -0.42 0.29 16 37 H 0.09 1.30 8.14 -51.93 -0.42 0.87 16 38 H 0.05 0.66 7.62 -51.93 -0.40 0.27 16 39 H 0.07 1.51 6.54 -51.93 -0.34 1.17 16 40 H 0.07 1.18 5.60 -51.93 -0.29 0.89 16 41 H 0.12 1.87 8.03 -52.48 -0.42 1.45 16 42 H 0.12 1.93 8.06 -52.49 -0.42 1.51 16 43 H 0.14 3.10 5.64 -52.49 -0.30 2.80 16 44 H 0.28 7.41 8.31 -40.82 -0.34 7.07 16 LS Contribution 378.05 15.07 5.70 5.70 Total: -1.00 -31.15 378.05 -9.19 -40.34 By element: Atomic # 1 Polarization: 9.40 SS G_CDS: -5.38 Total: 4.02 kcal Atomic # 6 Polarization: -9.70 SS G_CDS: -3.11 Total: -12.81 kcal Atomic # 7 Polarization: -47.14 SS G_CDS: -0.24 Total: -47.38 kcal Atomic # 8 Polarization: -3.94 SS G_CDS: 0.20 Total: -3.74 kcal Atomic # 14 Polarization: 21.84 SS G_CDS: -4.86 Total: 16.97 kcal Atomic # 17 Polarization: -1.60 SS G_CDS: -1.50 Total: -3.10 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -31.15 -9.19 -40.34 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000076016943.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 126.886 kcal (2) G-P(sol) polarization free energy of solvation -31.150 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 95.735 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.189 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.339 kcal (6) G-S(sol) free energy of system = (1) + (5) 86.547 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds