Wall clock time and date at job start Tue Mar 31 2020 05:26:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 N 1.31138 * 126.54799 * 2 1 4 4 C 1.34497 * 105.61205 * 179.97438 * 3 2 1 5 5 C 1.50696 * 126.28554 * 179.97438 * 4 3 2 6 6 H 1.08995 * 110.42595 * 347.31699 * 5 4 3 7 7 C 1.54905 * 110.37249 * 109.63212 * 5 4 3 8 8 C 1.55144 * 101.65479 * 155.89810 * 7 5 4 9 9 C 1.54321 * 103.01718 * 324.34706 * 8 7 5 10 10 N 1.47446 * 107.23403 * 22.28310 * 9 8 7 11 11 C 1.46899 * 110.99810 * 123.25605 * 10 9 8 12 12 C 1.50700 * 109.46890 * 69.87515 * 11 10 9 13 13 C 1.38112 * 120.02674 * 260.27110 * 12 11 10 14 14 C 1.38391 * 120.05309 * 180.31959 * 13 12 11 15 15 Cl 1.73606 * 119.94546 * 179.70313 * 14 13 12 16 16 C 1.38428 * 120.11387 * 359.68398 * 14 13 12 17 17 C 1.38065 * 120.05675 * 0.02562 * 16 14 13 18 18 C 1.38859 * 120.02863 * 79.99886 * 12 11 10 19 19 O 1.35759 * 120.05470 * 359.97438 * 18 12 11 20 20 C 1.34825 * 116.99575 * 185.32474 * 19 18 12 21 21 H 1.08000 * 120.00170 * 354.86450 * 20 19 18 22 22 C 1.38649 * 119.99796 * 175.14816 * 20 19 18 23 23 N 1.31560 * 119.99924 * 359.97438 * 22 20 19 24 24 Si 1.86805 * 120.00084 * 179.97438 * 22 20 19 25 25 H 1.48503 * 109.47074 * 60.00085 * 24 22 20 26 26 H 1.48498 * 109.46984 * 179.97438 * 24 22 20 27 27 H 1.48496 * 109.47273 * 299.99838 * 24 22 20 28 28 N 1.29944 * 107.42473 * 0.25078 * 4 3 2 29 29 O 1.21302 * 110.25360 * 359.57478 * 28 4 3 30 30 H 1.08996 * 109.47631 * 89.99214 * 1 2 3 31 31 H 1.09002 * 109.46994 * 209.99629 * 1 2 3 32 32 H 1.08999 * 109.47094 * 329.99073 * 1 2 3 33 33 H 1.08997 * 110.99138 * 37.80828 * 7 5 4 34 34 H 1.08994 * 110.99169 * 273.98855 * 7 5 4 35 35 H 1.08995 * 110.70820 * 205.96466 * 8 7 5 36 36 H 1.08998 * 110.85198 * 82.79886 * 8 7 5 37 37 H 1.08997 * 109.88813 * 262.87202 * 9 8 7 38 38 H 1.08998 * 109.88631 * 141.68831 * 9 8 7 39 39 H 1.09000 * 109.47180 * 309.87705 * 11 10 9 40 40 H 1.08997 * 109.47051 * 189.87223 * 11 10 9 41 41 H 1.07998 * 119.97447 * 0.02562 * 13 12 11 42 42 H 1.08002 * 119.97422 * 179.97438 * 16 14 13 43 43 H 1.08003 * 120.03273 * 180.02562 * 17 16 14 44 44 H 0.97010 * 119.99865 * 179.97438 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2879 1.0535 0.0000 4 6 3.5440 0.5729 0.0006 5 6 4.8111 1.3888 0.0003 6 1 4.5914 2.4324 -0.2247 7 6 5.5283 1.2715 1.3682 8 6 6.9953 1.5962 0.9818 9 6 7.1332 0.9658 -0.4200 10 7 5.7745 0.8428 -0.9793 11 6 5.6699 1.5425 -2.2667 12 6 6.4659 0.7994 -3.3084 13 6 7.7298 1.2360 -3.6540 14 6 8.4586 0.5579 -4.6153 15 17 10.0439 1.1137 -5.0531 16 6 7.9259 -0.5633 -5.2281 17 6 6.6653 -1.0074 -4.8819 18 6 5.9316 -0.3283 -3.9175 19 8 4.6919 -0.7630 -3.5751 20 6 4.2777 -1.9238 -4.1219 21 1 4.8881 -2.4204 -4.8616 22 6 3.0654 -2.4769 -3.7388 23 7 2.3195 -1.8693 -2.8415 24 14 2.4911 -4.0847 -4.4968 25 1 3.4811 -5.1519 -4.2030 26 1 1.1742 -4.4602 -3.9225 27 1 2.3619 -3.9206 -5.9670 28 7 3.4645 -0.7241 -0.0045 29 8 2.3029 -1.0735 0.0003 30 1 -0.3634 0.0001 -1.0276 31 1 -0.3633 -0.8900 0.5138 32 1 -0.3633 0.8899 0.5140 33 1 5.4444 0.2608 1.7677 34 1 5.1401 2.0031 2.0767 35 1 7.6900 1.1333 1.6826 36 1 7.1555 2.6735 0.9374 37 1 7.5919 -0.0197 -0.3399 38 1 7.7399 1.6088 -1.0576 39 1 6.0620 2.5543 -2.1633 40 1 4.6245 1.5874 -2.5719 41 1 8.1478 2.1102 -3.1771 42 1 8.4965 -1.0906 -5.9783 43 1 6.2502 -1.8823 -5.3599 44 1 1.4711 -2.2561 -2.5737 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000076016945.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:26:53 Heat of formation + Delta-G solvation = 71.262196 kcal Electronic energy + Delta-G solvation = -31488.627597 eV Core-core repulsion = 27243.231761 eV Total energy + Delta-G solvation = -4245.395836 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 363.114 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -44.64259 -39.57720 -38.51324 -36.74386 -35.52818 -34.95646 -32.99856 -32.62616 -32.22744 -29.92298 -29.00968 -28.65058 -28.04808 -25.43321 -25.09138 -23.26314 -22.24725 -21.72066 -21.34931 -20.27988 -19.51483 -18.04002 -17.17283 -16.95308 -16.81768 -15.88616 -15.43833 -15.30622 -14.84905 -14.53855 -14.16279 -13.91032 -13.68556 -13.47233 -13.24304 -13.04995 -12.99510 -12.79981 -12.68637 -12.43952 -12.28859 -11.97238 -11.78678 -11.61690 -11.45186 -11.29745 -11.12844 -11.08361 -10.93251 -10.84058 -10.60186 -10.52045 -10.44725 -10.35219 -10.27140 -10.22461 -9.38222 -8.94664 -8.79709 -8.28193 -7.89912 -7.17670 -6.46671 -4.01103 1.97442 2.10994 2.14001 2.84723 2.98704 3.11529 3.13687 3.14361 3.65725 3.94462 3.99137 4.34889 4.61612 4.72130 4.90496 4.99014 5.06043 5.08701 5.21216 5.37697 5.40669 5.54295 5.55672 5.58203 5.62711 5.65037 5.77723 5.83020 5.85964 5.96384 6.02132 6.11538 6.13064 6.19830 6.25879 6.41152 6.45231 6.51770 6.67861 6.79156 6.90813 6.91958 7.16807 7.27795 7.35519 7.51347 7.60795 7.95373 8.98509 9.11485 9.65843 10.68715 Molecular weight = 363.11amu Principal moments of inertia in cm(-1) A = 0.008052 B = 0.004816 C = 0.003199 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3476.730244 B = 5812.897565 C = 8751.578481 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 C 0.168 3.832 3 N -0.495 5.495 4 C 0.167 3.833 5 C 0.170 3.830 6 H 0.076 0.924 7 C -0.116 4.116 8 C -0.140 4.140 9 C 0.049 3.951 10 N -0.501 5.501 11 C 0.118 3.882 12 C -0.148 4.148 13 C -0.056 4.056 14 C -0.130 4.130 15 Cl -0.110 7.110 16 C -0.057 4.057 17 C -0.230 4.230 18 C 0.176 3.824 19 O -0.146 6.146 20 C -0.395 4.395 21 H 0.088 0.912 22 C 0.051 3.949 23 N -0.837 5.837 24 Si 0.936 3.064 25 H -0.271 1.271 26 H -0.278 1.278 27 H -0.273 1.273 28 N -0.321 5.321 29 O 0.106 5.894 30 H 0.096 0.904 31 H 0.087 0.913 32 H 0.093 0.907 33 H 0.078 0.922 34 H 0.075 0.925 35 H 0.075 0.925 36 H 0.067 0.933 37 H 0.077 0.923 38 H 0.058 0.942 39 H 0.033 0.967 40 H 0.081 0.919 41 H 0.117 0.883 42 H 0.115 0.885 43 H 0.134 0.866 44 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.364 5.536 6.344 8.529 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 C -0.053 4.053 3 N -0.230 5.230 4 C -0.107 4.107 5 C 0.060 3.940 6 H 0.094 0.906 7 C -0.155 4.155 8 C -0.178 4.178 9 C -0.079 4.079 10 N -0.226 5.226 11 C -0.009 4.009 12 C -0.150 4.150 13 C -0.075 4.075 14 C -0.158 4.158 15 Cl -0.082 7.082 16 C -0.076 4.076 17 C -0.249 4.249 18 C 0.119 3.881 19 O -0.046 6.046 20 C -0.471 4.471 21 H 0.105 0.895 22 C -0.156 4.156 23 N -0.470 5.470 24 Si 0.761 3.239 25 H -0.197 1.197 26 H -0.203 1.203 27 H -0.198 1.198 28 N -0.020 5.020 29 O 0.040 5.960 30 H 0.115 0.885 31 H 0.106 0.894 32 H 0.111 0.889 33 H 0.097 0.903 34 H 0.094 0.906 35 H 0.094 0.906 36 H 0.086 0.914 37 H 0.095 0.905 38 H 0.076 0.924 39 H 0.051 0.949 40 H 0.100 0.900 41 H 0.135 0.865 42 H 0.133 0.867 43 H 0.151 0.849 44 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 1.768 5.027 6.478 8.389 hybrid contribution -0.031 -0.137 -0.761 0.774 sum 1.737 4.890 5.717 7.721 Atomic orbital electron populations 1.20178 0.81783 1.04339 1.04963 1.28223 0.98278 0.81407 0.97347 1.71621 1.00479 1.29507 1.21436 1.24982 0.93532 0.88563 1.03595 1.20407 0.86532 0.94278 0.92769 0.90628 1.22707 0.94648 1.02781 0.95402 1.22803 0.96572 1.00696 0.97746 1.22798 0.90494 1.00968 0.93641 1.63199 1.02720 1.54984 1.01665 1.20799 1.00288 0.92452 0.87386 1.18564 0.95183 0.99003 1.02286 1.20347 0.92678 0.98612 0.95910 1.20175 0.87891 1.01552 1.06137 1.98271 1.27159 1.89823 1.92962 1.20602 0.94906 0.94130 0.97971 1.21078 0.95846 1.04550 1.03441 1.19096 0.85873 0.91940 0.91219 1.84012 1.23534 1.36678 1.60406 1.21234 1.04825 0.98103 1.22890 0.89471 1.25145 0.95339 0.98897 0.96182 1.70019 1.11444 1.37922 1.27578 0.85864 0.78345 0.80786 0.78911 1.19654 1.20262 1.19799 1.74546 0.96415 1.15061 1.16014 1.85320 1.11531 1.35167 1.63957 0.88540 0.89374 0.88874 0.90296 0.90611 0.90638 0.91427 0.90513 0.92380 0.94850 0.90033 0.86532 0.86658 0.84862 0.92303 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 -0.64 10.51 36.00 0.38 -0.26 16 2 C 0.17 2.98 8.51 -13.06 -0.11 2.87 16 3 N -0.49 -9.57 11.55 -9.87 -0.11 -9.68 16 4 C 0.17 3.37 7.12 -156.37 -1.11 2.26 16 5 C 0.17 2.95 2.94 -67.34 -0.20 2.75 16 6 H 0.08 1.25 7.81 -51.93 -0.41 0.84 16 7 C -0.12 -1.63 6.48 -24.59 -0.16 -1.79 16 8 C -0.14 -1.71 6.94 -24.90 -0.17 -1.88 16 9 C 0.05 0.75 6.39 -2.83 -0.02 0.73 16 10 N -0.50 -9.36 4.79 -226.19 -1.08 -10.44 16 11 C 0.12 2.25 4.37 -4.98 -0.02 2.23 16 12 C -0.15 -3.02 4.96 -104.44 -0.52 -3.53 16 13 C -0.06 -1.01 8.60 -39.57 -0.34 -1.35 16 14 C -0.13 -2.35 6.32 -39.45 -0.25 -2.60 16 15 Cl -0.11 -1.73 28.95 -51.86 -1.50 -3.23 16 16 C -0.06 -1.07 9.82 -39.57 -0.39 -1.46 16 17 C -0.23 -4.91 9.17 -39.40 -0.36 -5.27 16 18 C 0.18 4.11 6.62 -39.11 -0.26 3.85 16 19 O -0.15 -3.92 9.00 0.03 0.00 -3.92 16 20 C -0.39 -10.54 9.49 30.88 0.29 -10.24 16 21 H 0.09 2.20 5.20 -52.49 -0.27 1.92 16 22 C 0.05 1.32 5.49 -17.52 -0.10 1.23 16 23 N -0.84 -22.08 13.10 55.48 0.73 -21.35 16 24 Si 0.94 19.92 29.55 -169.99 -5.02 14.90 16 25 H -0.27 -5.77 7.11 56.52 0.40 -5.37 16 26 H -0.28 -5.74 7.11 56.52 0.40 -5.34 16 27 H -0.27 -5.69 7.11 56.52 0.40 -5.29 16 28 N -0.32 -7.13 12.16 30.90 0.38 -6.75 16 29 O 0.11 2.20 10.73 18.10 0.19 2.40 16 30 H 0.10 1.14 8.14 -51.93 -0.42 0.71 16 31 H 0.09 0.81 8.14 -51.93 -0.42 0.39 16 32 H 0.09 0.89 8.14 -51.93 -0.42 0.46 16 33 H 0.08 1.21 8.05 -51.93 -0.42 0.79 16 34 H 0.08 0.90 8.14 -51.93 -0.42 0.48 16 35 H 0.07 0.81 8.14 -51.93 -0.42 0.39 16 36 H 0.07 0.72 8.14 -51.93 -0.42 0.30 16 37 H 0.08 1.27 8.14 -51.93 -0.42 0.85 16 38 H 0.06 0.84 6.18 -51.93 -0.32 0.52 16 39 H 0.03 0.55 7.83 -51.93 -0.41 0.14 16 40 H 0.08 1.81 7.79 -51.93 -0.40 1.41 16 41 H 0.12 1.82 7.63 -52.49 -0.40 1.42 16 42 H 0.12 1.89 8.06 -52.49 -0.42 1.47 16 43 H 0.13 2.85 5.64 -52.48 -0.30 2.55 16 44 H 0.27 6.56 8.31 -40.82 -0.34 6.22 16 LS Contribution 384.38 15.07 5.79 5.79 Total: -1.00 -30.46 384.38 -9.41 -39.87 By element: Atomic # 1 Polarization: 10.32 SS G_CDS: -5.44 Total: 4.88 kcal Atomic # 6 Polarization: -9.13 SS G_CDS: -3.34 Total: -12.46 kcal Atomic # 7 Polarization: -48.13 SS G_CDS: -0.09 Total: -48.22 kcal Atomic # 8 Polarization: -1.72 SS G_CDS: 0.19 Total: -1.53 kcal Atomic # 14 Polarization: 19.92 SS G_CDS: -5.02 Total: 14.90 kcal Atomic # 17 Polarization: -1.73 SS G_CDS: -1.50 Total: -3.23 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -30.46 -9.41 -39.87 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000076016945.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.133 kcal (2) G-P(sol) polarization free energy of solvation -30.461 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 80.672 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.871 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.262 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds