Wall clock time and date at job start Tue Mar 31 2020 06:00:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.45196 * 109.47175 * 2 1 4 4 C 1.34234 * 117.00087 * 179.97438 * 3 2 1 5 5 O 1.20827 * 119.99531 * 359.97438 * 4 3 2 6 6 C 1.50698 * 119.99905 * 180.02562 * 4 3 2 7 7 C 1.50692 * 109.50388 * 59.93148 * 6 4 3 8 8 H 1.08001 * 119.99988 * 120.06368 * 7 6 4 9 9 C 1.37875 * 120.00252 * 300.06833 * 7 6 4 10 10 N 1.31518 * 119.99768 * 359.97438 * 9 7 6 11 11 Si 1.86801 * 120.00376 * 179.97438 * 9 7 6 12 12 H 1.48501 * 109.46698 * 359.97438 * 11 9 7 13 13 H 1.48497 * 109.47035 * 119.99898 * 11 9 7 14 14 H 1.48502 * 109.46858 * 239.99611 * 11 9 7 15 15 C 1.53194 * 109.52263 * 299.84761 * 6 4 3 16 16 N 1.46918 * 108.78089 * 185.40186 * 15 6 4 17 17 C 1.34783 * 120.63391 * 233.63599 * 16 15 6 18 18 O 1.21511 * 119.99500 * 359.97414 * 17 16 15 19 19 O 1.34635 * 119.99810 * 179.97438 * 17 16 15 20 20 C 1.45206 * 116.99519 * 179.97438 * 19 17 16 21 21 C 1.52999 * 109.46853 * 60.00225 * 20 19 17 22 22 C 1.53003 * 109.46650 * 180.02562 * 20 19 17 23 23 C 1.52999 * 109.46963 * 299.99989 * 20 19 17 24 24 C 1.46929 * 118.73922 * 53.60697 * 16 15 6 25 25 C 1.53196 * 108.77486 * 306.39780 * 24 16 15 26 26 C 1.53037 * 109.31315 * 54.63188 * 25 24 16 27 27 F 1.39904 * 109.46024 * 58.65540 * 26 25 24 28 28 F 1.39898 * 109.46095 * 178.61171 * 26 25 24 29 29 H 1.09003 * 109.47270 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.47618 * 300.00199 * 1 2 3 31 31 H 1.09004 * 109.47084 * 60.00253 * 1 2 3 32 32 H 1.08997 * 109.47618 * 239.99801 * 2 1 3 33 33 H 1.09004 * 109.47084 * 119.99746 * 2 1 3 34 34 H 0.97000 * 120.00238 * 179.97438 * 10 9 7 35 35 H 1.09008 * 109.58991 * 305.19673 * 15 6 4 36 36 H 1.09000 * 109.58500 * 65.47004 * 15 6 4 37 37 H 1.09003 * 109.47139 * 60.00212 * 21 20 19 38 38 H 1.09001 * 109.46774 * 179.97438 * 21 20 19 39 39 H 1.08993 * 109.47454 * 299.99881 * 21 20 19 40 40 H 1.08997 * 109.47439 * 60.00299 * 22 20 19 41 41 H 1.08998 * 109.46538 * 180.02562 * 22 20 19 42 42 H 1.09000 * 109.47023 * 299.99427 * 22 20 19 43 43 H 1.09000 * 109.46984 * 60.00745 * 23 20 19 44 44 H 1.09005 * 109.46568 * 179.97438 * 23 20 19 45 45 H 1.08997 * 109.47633 * 300.00011 * 23 20 19 46 46 H 1.08998 * 109.59209 * 186.60595 * 24 16 15 47 47 H 1.09003 * 109.58217 * 66.17876 * 24 16 15 48 48 H 1.08998 * 109.49640 * 174.58442 * 25 24 16 49 49 H 1.08996 * 109.49713 * 294.67755 * 25 24 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5865 0.0015 6 6 3.9207 2.9374 0.0012 7 6 3.4549 3.6739 1.2305 8 1 4.1764 4.0482 1.9416 9 6 2.1075 3.8700 1.4476 10 7 1.2288 3.4145 0.5815 11 14 1.5300 4.7824 2.9719 12 1 2.7070 5.1886 3.7811 13 1 0.7667 5.9900 2.5664 14 1 0.6571 3.8933 3.7799 15 6 3.4527 3.6855 -1.2511 16 7 4.1248 4.9910 -1.3010 17 6 3.4099 6.1272 -1.4220 18 8 2.1978 6.0778 -1.4914 19 8 4.0389 7.3168 -1.4659 20 6 3.2056 8.4986 -1.5977 21 6 2.2486 8.5832 -0.4069 22 6 4.0911 9.7459 -1.6307 23 6 2.3991 8.4117 -2.8950 24 6 5.5909 5.0346 -1.2157 25 6 6.0350 4.2713 0.0361 26 6 5.4490 2.8580 0.0017 27 9 5.8821 2.2020 -1.1557 28 9 5.8785 2.1478 1.1279 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3634 0.5138 0.8899 31 1 -0.3633 0.5138 -0.8900 32 1 1.8934 -0.5138 -0.8899 33 1 1.8933 -0.5138 0.8900 34 1 0.2809 3.5521 0.7343 35 1 3.7098 3.1080 -2.1392 36 1 2.3731 3.8293 -1.2088 37 1 2.8232 8.6450 0.5173 38 1 1.6234 9.4705 -0.5057 39 1 1.6179 7.6946 -0.3838 40 1 4.7726 9.6854 -2.4792 41 1 3.4655 10.6330 -1.7292 42 1 4.6659 9.8079 -0.7066 43 1 1.7683 7.5232 -2.8719 44 1 1.7732 9.2987 -2.9937 45 1 3.0808 8.3515 -3.7433 46 1 5.9225 6.0707 -1.1488 47 1 6.0224 4.5671 -2.1009 48 1 7.1231 4.2136 0.0601 49 1 5.6781 4.7915 0.9250 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000169805780.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:00:41 Heat of formation + Delta-G solvation = -248.028509 kcal Electronic energy + Delta-G solvation = -37657.742014 eV Core-core repulsion = 32642.935438 eV Total energy + Delta-G solvation = -5014.806576 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 363.174 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -48.03397 -45.98483 -40.28884 -39.21117 -37.65986 -35.79268 -35.22976 -33.97459 -33.19797 -31.20165 -30.88489 -30.23957 -27.26287 -27.13401 -25.51213 -24.58071 -23.89552 -22.40163 -21.59433 -20.58246 -19.41441 -18.81003 -17.59221 -16.95768 -16.43832 -16.31365 -15.87184 -15.76257 -15.67099 -15.30808 -15.21937 -14.64142 -14.55131 -14.27536 -13.97577 -13.82248 -13.30698 -13.12747 -12.89650 -12.73907 -12.41327 -12.37349 -12.32497 -12.26179 -12.17950 -12.03521 -11.87223 -11.81146 -11.67808 -11.56618 -11.28360 -11.12035 -11.08927 -10.99226 -10.93832 -10.90517 -10.71434 -10.52177 -10.37326 -9.99354 -9.88503 -9.49562 -9.38432 -9.35195 -9.14941 -8.53423 -7.99245 -6.21963 -4.41064 2.67160 3.19360 3.28065 3.29927 3.53719 3.62022 3.91785 4.23423 4.29946 4.65165 4.92596 4.94931 4.97557 5.08020 5.11064 5.15823 5.27429 5.56061 5.62534 5.64769 5.68485 5.72194 5.75947 5.78169 5.81617 5.88971 5.91784 5.93014 6.02440 6.07562 6.08048 6.11811 6.19999 6.40212 6.46396 6.49767 6.50773 6.58166 6.64598 6.68591 6.81529 7.12936 7.30758 7.60748 7.65600 7.80404 8.08586 8.50591 9.05120 9.18517 9.25127 10.74444 Molecular weight = 363.17amu Principal moments of inertia in cm(-1) A = 0.010455 B = 0.004990 C = 0.004264 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2677.542551 B = 5609.762609 C = 6565.748332 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C 0.043 3.957 3 O -0.267 6.267 4 C 0.476 3.524 5 O -0.552 6.552 6 C 0.040 3.960 7 C -0.527 4.527 8 H 0.073 0.927 9 C 0.079 3.921 10 N -0.807 5.807 11 Si 0.899 3.101 12 H -0.272 1.272 13 H -0.279 1.279 14 H -0.282 1.282 15 C 0.136 3.864 16 N -0.573 5.573 17 C 0.657 3.343 18 O -0.553 6.553 19 O -0.371 6.371 20 C 0.138 3.862 21 C -0.184 4.184 22 C -0.138 4.138 23 C -0.182 4.182 24 C 0.118 3.882 25 C -0.165 4.165 26 C 0.309 3.691 27 F -0.209 7.209 28 F -0.195 7.195 29 H 0.058 0.942 30 H 0.062 0.938 31 H 0.062 0.938 32 H 0.049 0.951 33 H 0.050 0.950 34 H 0.270 0.730 35 H 0.042 0.958 36 H 0.151 0.849 37 H 0.057 0.943 38 H 0.062 0.938 39 H 0.093 0.907 40 H 0.063 0.937 41 H 0.075 0.925 42 H 0.064 0.936 43 H 0.091 0.909 44 H 0.063 0.937 45 H 0.055 0.945 46 H 0.095 0.905 47 H 0.069 0.931 48 H 0.085 0.915 49 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.450 7.690 -4.646 9.312 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C -0.033 4.033 3 O -0.179 6.179 4 C 0.320 3.680 5 O -0.444 6.444 6 C 0.037 3.963 7 C -0.563 4.563 8 H 0.091 0.909 9 C -0.131 4.131 10 N -0.440 5.440 11 Si 0.726 3.274 12 H -0.197 1.197 13 H -0.204 1.204 14 H -0.208 1.208 15 C 0.015 3.985 16 N -0.311 5.311 17 C 0.411 3.589 18 O -0.441 6.441 19 O -0.287 6.287 20 C 0.101 3.899 21 C -0.241 4.241 22 C -0.196 4.196 23 C -0.239 4.239 24 C -0.006 4.006 25 C -0.204 4.204 26 C 0.272 3.728 27 F -0.190 7.190 28 F -0.176 7.176 29 H 0.077 0.923 30 H 0.081 0.919 31 H 0.081 0.919 32 H 0.067 0.933 33 H 0.068 0.932 34 H 0.081 0.919 35 H 0.060 0.940 36 H 0.168 0.832 37 H 0.076 0.924 38 H 0.081 0.919 39 H 0.112 0.888 40 H 0.082 0.918 41 H 0.093 0.907 42 H 0.083 0.917 43 H 0.109 0.891 44 H 0.082 0.918 45 H 0.074 0.926 46 H 0.114 0.886 47 H 0.088 0.912 48 H 0.103 0.897 49 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges 2.008 7.405 -4.736 9.016 hybrid contribution -0.145 -0.035 1.028 1.039 sum 1.863 7.370 -3.708 8.458 Atomic orbital electron populations 1.21604 0.93812 1.00697 1.03358 1.22827 0.94962 0.85124 1.00351 1.87461 1.22595 1.25773 1.82089 1.24583 0.81345 0.91841 0.70199 1.90556 1.61381 1.43541 1.48958 1.19302 0.87335 0.89899 0.99807 1.20528 0.92862 1.37794 1.05127 0.90863 1.24856 0.96354 0.94883 0.96987 1.69653 1.02162 1.38634 1.33587 0.86400 0.78972 0.79692 0.82364 1.19679 1.20444 1.20783 1.21869 1.03389 0.79389 0.93875 1.46646 1.05702 1.04386 1.74413 1.17779 0.84114 0.80457 0.76555 1.90887 1.11966 1.86018 1.55187 1.86233 1.41267 1.14214 1.86958 1.21897 0.90049 0.81902 0.96085 1.22509 1.00154 1.04412 0.96994 1.21829 0.99858 0.94837 1.03027 1.22502 1.00930 1.04486 0.95958 1.21531 0.80755 1.01556 0.96717 1.22860 1.01141 0.94081 1.02305 1.20870 0.94232 0.86491 0.71181 1.92924 1.91488 1.83802 1.50793 1.92954 1.91250 1.80912 1.52495 0.92279 0.91865 0.91877 0.93259 0.93164 0.91890 0.94009 0.83200 0.92351 0.91901 0.88784 0.91785 0.90660 0.91653 0.89065 0.91764 0.92566 0.88646 0.91240 0.89697 0.87243 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.24 10.29 37.15 0.38 -1.86 16 2 C 0.04 0.86 6.19 37.15 0.23 1.09 16 3 O -0.27 -6.38 6.57 -39.27 -0.26 -6.64 16 4 C 0.48 12.00 6.29 36.00 0.23 12.23 16 5 O -0.55 -14.69 14.59 -18.75 -0.27 -14.96 16 6 C 0.04 0.94 0.20 -156.70 -0.03 0.91 16 7 C -0.53 -13.01 6.75 -34.44 -0.23 -13.25 16 8 H 0.07 1.82 6.62 -52.49 -0.35 1.47 16 9 C 0.08 1.95 5.07 -17.82 -0.09 1.86 16 10 N -0.81 -19.94 8.02 55.43 0.44 -19.50 16 11 Si 0.90 20.08 29.54 -169.99 -5.02 15.05 16 12 H -0.27 -6.08 7.11 56.52 0.40 -5.67 16 13 H -0.28 -6.27 7.11 56.52 0.40 -5.87 16 14 H -0.28 -6.33 7.11 56.52 0.40 -5.92 16 15 C 0.14 3.03 4.68 -3.71 -0.02 3.02 16 16 N -0.57 -11.29 2.68 -178.56 -0.48 -11.77 16 17 C 0.66 13.02 7.74 54.06 0.42 13.44 16 18 O -0.55 -12.19 11.30 -19.28 -0.22 -12.40 16 19 O -0.37 -6.26 8.53 -40.31 -0.34 -6.60 16 20 C 0.14 1.96 1.13 -90.62 -0.10 1.85 16 21 C -0.18 -2.77 8.37 37.16 0.31 -2.46 16 22 C -0.14 -1.45 8.85 37.16 0.33 -1.13 16 23 C -0.18 -2.45 8.37 37.16 0.31 -2.14 16 24 C 0.12 1.92 6.24 -3.71 -0.02 1.90 16 25 C -0.17 -2.89 5.37 -26.61 -0.14 -3.03 16 26 C 0.31 6.74 0.99 -26.69 -0.03 6.72 16 27 F -0.21 -4.60 15.28 2.25 0.03 -4.57 16 28 F -0.20 -4.66 15.80 2.25 0.04 -4.62 16 29 H 0.06 0.78 8.14 -51.93 -0.42 0.36 16 30 H 0.06 1.08 8.14 -51.93 -0.42 0.65 16 31 H 0.06 1.02 8.14 -51.93 -0.42 0.60 16 32 H 0.05 0.94 8.13 -51.93 -0.42 0.52 16 33 H 0.05 1.01 8.13 -51.93 -0.42 0.59 16 34 H 0.27 6.51 8.31 -40.82 -0.34 6.17 16 35 H 0.04 0.90 7.92 -51.92 -0.41 0.49 16 36 H 0.15 3.72 4.85 -51.93 -0.25 3.46 16 37 H 0.06 0.88 8.14 -51.93 -0.42 0.45 16 38 H 0.06 0.78 8.14 -51.93 -0.42 0.36 16 39 H 0.09 1.77 5.88 -51.93 -0.31 1.46 16 40 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 41 H 0.07 0.64 8.14 -51.93 -0.42 0.22 16 42 H 0.06 0.67 8.14 -51.93 -0.42 0.25 16 43 H 0.09 1.51 5.88 -51.93 -0.31 1.20 16 44 H 0.06 0.72 8.14 -51.93 -0.42 0.29 16 45 H 0.06 0.70 8.14 -51.93 -0.42 0.28 16 46 H 0.10 1.35 6.93 -51.93 -0.36 0.99 16 47 H 0.07 1.04 7.92 -51.93 -0.41 0.63 16 48 H 0.08 1.23 8.14 -51.93 -0.42 0.81 16 49 H 0.11 2.00 6.50 -51.93 -0.34 1.66 16 LS Contribution 386.78 15.07 5.83 5.83 Total: -1.00 -29.32 386.78 -6.07 -35.38 By element: Atomic # 1 Polarization: 13.01 SS G_CDS: -7.36 Total: 5.65 kcal Atomic # 6 Polarization: 17.60 SS G_CDS: 1.54 Total: 19.14 kcal Atomic # 7 Polarization: -31.23 SS G_CDS: -0.03 Total: -31.26 kcal Atomic # 8 Polarization: -39.51 SS G_CDS: -1.09 Total: -40.60 kcal Atomic # 9 Polarization: -9.26 SS G_CDS: 0.07 Total: -9.19 kcal Atomic # 14 Polarization: 20.08 SS G_CDS: -5.02 Total: 15.05 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -29.32 -6.07 -35.38 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000169805780.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -212.645 kcal (2) G-P(sol) polarization free energy of solvation -29.317 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -241.962 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.067 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.384 kcal (6) G-S(sol) free energy of system = (1) + (5) -248.029 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds