Wall clock time and date at job start Tue Mar 31 2020 05:39:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 C 1.46902 * 110.99999 * 2 1 4 4 C 1.39990 * 111.00004 * 236.04883 * 2 1 3 5 5 C 1.38693 * 120.08271 * 59.72110 * 4 2 1 6 6 C 1.38243 * 120.00506 * 179.77028 * 5 4 2 7 7 C 1.38376 * 120.17452 * 0.51038 * 6 5 4 8 8 Cl 1.73601 * 119.91202 * 179.76388 * 7 6 5 9 9 C 1.38337 * 120.17324 * 359.74784 * 7 6 5 10 10 C 1.38655 * 119.99178 * 359.97438 * 9 7 6 11 11 N 1.40182 * 120.09212 * 180.02562 * 10 9 7 12 12 C 1.34775 * 119.99935 * 24.77202 * 11 10 9 13 13 O 1.21601 * 120.00153 * 5.64764 * 12 11 10 14 14 N 1.34777 * 120.00260 * 185.63208 * 12 11 10 15 15 C 1.40184 * 120.00010 * 180.02562 * 14 12 11 16 16 C 1.40399 * 125.97424 * 359.71863 * 15 14 12 17 17 C 1.35242 * 107.86974 * 179.88851 * 16 15 14 18 18 N 1.34966 * 107.85680 * 0.37428 * 17 16 15 19 19 C 1.46503 * 125.97671 * 179.73207 * 18 17 16 20 20 C 1.50701 * 109.47206 * 125.01499 * 19 18 17 21 21 H 1.07996 * 119.99859 * 359.97438 * 20 19 18 22 22 C 1.37875 * 119.99837 * 179.97438 * 20 19 18 23 23 N 1.31512 * 120.00274 * 179.97438 * 22 20 19 24 24 Si 1.86799 * 120.00148 * 359.97438 * 22 20 19 25 25 H 1.48504 * 109.47288 * 90.00080 * 24 22 20 26 26 H 1.48503 * 109.47424 * 209.99915 * 24 22 20 27 27 H 1.48501 * 109.47102 * 330.00285 * 24 22 20 28 28 N 1.31215 * 125.96867 * 180.02562 * 15 14 12 29 29 H 1.08995 * 109.47317 * 183.95476 * 1 2 3 30 30 H 1.09002 * 109.47189 * 63.95014 * 1 2 3 31 31 H 1.09006 * 109.46697 * 303.95404 * 1 2 3 32 32 H 1.09001 * 109.46929 * 56.05355 * 3 2 1 33 33 H 1.08999 * 109.46777 * 176.04751 * 3 2 1 34 34 H 1.08997 * 109.47415 * 296.04496 * 3 2 1 35 35 H 1.08003 * 120.00216 * 0.02562 * 5 4 2 36 36 H 1.07994 * 119.91084 * 180.25450 * 6 5 4 37 37 H 1.07995 * 120.00720 * 180.02562 * 9 7 6 38 38 H 0.97004 * 120.00638 * 204.77669 * 11 10 9 39 39 H 0.97005 * 119.99665 * 0.02562 * 14 12 11 40 40 H 1.07999 * 126.06730 * 0.02562 * 16 15 14 41 41 H 1.07999 * 126.07572 * 180.10221 * 17 16 15 42 42 H 1.09003 * 109.46865 * 245.01770 * 19 18 17 43 43 H 1.08996 * 109.46842 * 5.01153 * 19 18 17 44 44 H 0.96998 * 120.00587 * 179.97438 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9707 -0.7299 -1.0841 5 6 1.6549 -0.3538 -2.3812 6 6 2.1551 -1.0729 -3.4507 7 6 2.9626 -2.1749 -3.2311 8 17 3.5820 -3.0766 -4.5791 9 6 3.2779 -2.5598 -1.9403 10 6 2.7847 -1.8402 -0.8625 11 7 3.1033 -2.2280 0.4464 12 6 4.2271 -2.9324 0.6859 13 8 5.0161 -3.1433 -0.2151 14 7 4.4766 -3.4028 1.9240 15 6 5.6458 -4.1350 2.1731 16 6 6.6351 -4.4553 1.2298 17 6 7.5969 -5.1655 1.8620 18 7 7.2306 -5.2996 3.1540 19 6 7.9838 -6.0059 4.1933 20 6 8.2268 -5.0783 5.3558 21 1 7.8575 -4.0639 5.3236 22 6 8.9206 -5.5246 6.4606 23 7 9.1331 -4.7150 7.4749 24 14 9.5587 -7.2793 6.5166 25 1 10.9290 -7.3262 5.9461 26 1 9.5927 -7.7491 7.9250 27 1 8.6620 -8.1578 5.7232 28 7 6.0040 -4.6457 3.3275 29 1 -0.3634 -1.0252 0.0709 30 1 -0.3634 0.4513 -0.9233 31 1 -0.3633 0.5740 0.8525 32 1 1.5899 1.9163 0.8525 33 1 3.0828 1.3432 0.0708 34 1 1.7045 1.8724 -0.9233 35 1 1.0216 0.5034 -2.5559 36 1 1.9116 -0.7762 -4.4601 37 1 3.9086 -3.4200 -1.7720 38 1 2.5150 -1.9894 1.1798 39 1 3.8472 -3.2347 2.6427 40 1 6.6302 -4.1810 0.1852 41 1 8.4961 -5.5595 1.4118 42 1 7.4129 -6.8706 4.5315 43 1 8.9394 -6.3377 3.7873 44 1 9.6209 -5.0291 8.2523 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000186605564.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:39:54 Heat of formation + Delta-G solvation = 105.872084 kcal Electronic energy + Delta-G solvation = -29054.396109 eV Core-core repulsion = 24842.793822 eV Total energy + Delta-G solvation = -4211.602287 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 363.120 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.29354 -40.48506 -39.38813 -37.37272 -36.25922 -35.08351 -34.77328 -33.29359 -31.37365 -30.34325 -29.65485 -29.30386 -28.01669 -27.10514 -24.95257 -23.95486 -22.55129 -21.75647 -21.43576 -20.37342 -19.94136 -18.37203 -17.95314 -17.12455 -16.91570 -16.44229 -16.16948 -15.64650 -15.53470 -15.35841 -15.02545 -14.61860 -14.40015 -14.19697 -14.14653 -13.67786 -13.53433 -13.13347 -13.02666 -12.79991 -12.55590 -12.46609 -12.32828 -12.27275 -12.12624 -12.01160 -11.74291 -11.23737 -11.14270 -10.79825 -10.74982 -10.55044 -10.15908 -10.01355 -9.78238 -9.54225 -9.08165 -8.94910 -8.77013 -8.38801 -8.18438 -7.52230 -6.23780 -4.26136 0.72771 0.95504 1.87078 2.17765 2.49555 2.90570 3.15111 3.22139 3.22875 3.29735 3.35229 3.45940 3.73379 4.13053 4.22751 4.44537 4.64357 4.78848 4.87267 4.94033 4.99028 5.03876 5.08195 5.14177 5.35715 5.42675 5.46931 5.49287 5.53234 5.65796 5.86890 5.92404 6.02844 6.10435 6.31692 6.36572 6.41071 6.43725 6.53430 6.67708 6.88660 6.91899 7.26220 7.35776 7.73223 7.80766 8.32862 8.35383 8.54164 8.85963 9.31145 10.88904 Molecular weight = 363.12amu Principal moments of inertia in cm(-1) A = 0.014595 B = 0.002039 C = 0.001828 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1917.971191 B =13731.566907 C =15313.750423 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.509 5.509 3 C 0.029 3.971 4 C 0.050 3.950 5 C -0.114 4.114 6 C -0.127 4.127 7 C -0.012 4.012 8 Cl -0.065 7.065 9 C -0.121 4.121 10 C 0.216 3.784 11 N -0.667 5.667 12 C 0.713 3.287 13 O -0.549 6.549 14 N -0.635 5.635 15 C 0.276 3.724 16 C -0.281 4.281 17 C 0.052 3.948 18 N -0.319 5.319 19 C 0.232 3.768 20 C -0.534 4.534 21 H 0.086 0.914 22 C 0.076 3.924 23 N -0.888 5.888 24 Si 0.873 3.127 25 H -0.272 1.272 26 H -0.280 1.280 27 H -0.264 1.264 28 N -0.296 5.296 29 H 0.071 0.929 30 H 0.033 0.967 31 H 0.075 0.925 32 H 0.075 0.925 33 H 0.072 0.928 34 H 0.032 0.968 35 H 0.131 0.869 36 H 0.132 0.868 37 H 0.166 0.834 38 H 0.418 0.582 39 H 0.411 0.589 40 H 0.164 0.836 41 H 0.169 0.831 42 H 0.042 0.958 43 H 0.049 0.951 44 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.524 9.000 -20.962 29.386 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.230 5.230 3 C -0.118 4.118 4 C -0.047 4.047 5 C -0.135 4.135 6 C -0.147 4.147 7 C -0.040 4.040 8 Cl -0.037 7.037 9 C -0.143 4.143 10 C 0.117 3.883 11 N -0.313 5.313 12 C 0.413 3.587 13 O -0.424 6.424 14 N -0.285 5.285 15 C 0.021 3.979 16 C -0.312 4.312 17 C -0.097 4.097 18 N -0.101 5.101 19 C 0.113 3.887 20 C -0.572 4.572 21 H 0.104 0.896 22 C -0.128 4.128 23 N -0.525 5.525 24 Si 0.699 3.301 25 H -0.197 1.197 26 H -0.205 1.205 27 H -0.189 1.189 28 N -0.127 5.127 29 H 0.090 0.910 30 H 0.051 0.949 31 H 0.094 0.906 32 H 0.094 0.906 33 H 0.091 0.909 34 H 0.051 0.949 35 H 0.149 0.851 36 H 0.150 0.850 37 H 0.183 0.817 38 H 0.255 0.745 39 H 0.246 0.754 40 H 0.181 0.819 41 H 0.187 0.813 42 H 0.060 0.940 43 H 0.067 0.933 44 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -17.721 8.260 -19.822 27.842 hybrid contribution -0.169 -0.099 -0.617 0.647 sum -17.890 8.161 -20.438 28.362 Atomic orbital electron populations 1.22512 0.85692 1.02871 1.01124 1.59553 1.08577 1.14656 1.40232 1.22467 1.01388 0.86964 1.00984 1.18476 1.01857 0.94728 0.89620 1.21244 1.00429 1.00061 0.91721 1.20844 0.98920 0.95207 0.99777 1.20732 0.99187 0.95303 0.88730 1.98379 1.86331 1.74272 1.44667 1.21354 1.01877 1.02005 0.89043 1.17097 0.95779 0.91991 0.83431 1.42404 1.24380 1.56283 1.08253 1.15593 0.81485 0.78878 0.82789 1.90853 1.46672 1.61698 1.43193 1.41296 1.22066 1.54801 1.10290 1.18737 0.88238 0.97573 0.93307 1.21528 0.96065 1.11690 1.01954 1.22562 1.00466 1.01271 0.85448 1.48613 1.14350 1.39444 1.07648 1.20053 0.89914 0.92675 0.86056 1.21106 1.36752 1.00111 0.99280 0.89635 1.24833 0.95308 0.97541 0.95089 1.69868 1.40287 1.35702 1.06632 0.86910 0.79928 0.84985 0.78297 1.19702 1.20546 1.18851 1.77401 1.00094 1.16823 1.18348 0.91007 0.94880 0.90636 0.90643 0.90882 0.94894 0.85130 0.84978 0.81677 0.74483 0.75408 0.81910 0.81345 0.94015 0.93290 0.92178 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.13 9.34 60.07 0.56 0.69 16 2 N -0.51 -3.70 4.33 -186.65 -0.81 -4.51 16 3 C 0.03 0.18 9.39 60.07 0.56 0.75 16 4 C 0.05 0.44 4.76 -83.51 -0.40 0.04 16 5 C -0.11 -0.87 8.58 -39.41 -0.34 -1.21 16 6 C -0.13 -1.06 9.82 -39.53 -0.39 -1.44 16 7 C -0.01 -0.13 6.32 -39.49 -0.25 -0.37 16 8 Cl -0.07 -0.67 28.95 -51.86 -1.50 -2.17 16 9 C -0.12 -1.43 8.50 -39.39 -0.33 -1.77 16 10 C 0.22 2.33 6.45 -83.43 -0.54 1.79 16 11 N -0.67 -7.13 5.28 -14.07 -0.07 -7.20 16 12 C 0.71 10.04 8.34 -86.92 -0.72 9.32 16 13 O -0.55 -9.17 10.64 5.28 0.06 -9.11 16 14 N -0.64 -9.45 5.45 -15.51 -0.08 -9.53 16 15 C 0.28 5.34 8.11 -154.37 -1.25 4.09 16 16 C -0.28 -5.33 9.60 -39.84 -0.38 -5.71 16 17 C 0.05 0.98 11.44 -17.24 -0.20 0.78 16 18 N -0.32 -7.11 3.67 -62.56 -0.23 -7.34 16 19 C 0.23 5.44 5.33 -5.19 -0.03 5.41 16 20 C -0.53 -14.96 9.79 -34.44 -0.34 -15.30 16 21 H 0.09 2.72 8.06 -52.49 -0.42 2.29 16 22 C 0.08 2.12 5.47 -17.82 -0.10 2.03 16 23 N -0.89 -26.48 13.96 55.43 0.77 -25.71 16 24 Si 0.87 20.01 27.47 -169.99 -4.67 15.34 16 25 H -0.27 -6.04 7.11 56.52 0.40 -5.64 16 26 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 27 H -0.26 -5.72 6.54 56.52 0.37 -5.35 16 28 N -0.30 -6.64 12.42 31.44 0.39 -6.25 16 29 H 0.07 0.39 8.14 -51.93 -0.42 -0.03 16 30 H 0.03 0.16 7.11 -51.93 -0.37 -0.21 16 31 H 0.07 0.32 8.12 -51.93 -0.42 -0.10 16 32 H 0.07 0.39 8.12 -51.93 -0.42 -0.03 16 33 H 0.07 0.57 8.14 -51.93 -0.42 0.14 16 34 H 0.03 0.18 7.36 -51.93 -0.38 -0.20 16 35 H 0.13 0.73 7.02 -52.48 -0.37 0.36 16 36 H 0.13 0.85 8.06 -52.49 -0.42 0.42 16 37 H 0.17 2.28 5.78 -52.49 -0.30 1.97 16 38 H 0.42 3.51 8.29 -40.82 -0.34 3.17 16 39 H 0.41 4.94 8.84 -40.82 -0.36 4.58 16 40 H 0.16 2.99 5.91 -52.49 -0.31 2.68 16 41 H 0.17 2.52 8.06 -52.49 -0.42 2.10 16 42 H 0.04 0.97 7.20 -51.93 -0.37 0.60 16 43 H 0.05 1.04 7.50 -51.93 -0.39 0.65 16 44 H 0.27 7.41 8.31 -40.82 -0.34 7.07 16 LS Contribution 384.18 15.07 5.79 5.79 Total: -1.00 -33.30 384.18 -9.82 -43.11 By element: Atomic # 1 Polarization: 13.80 SS G_CDS: -5.32 Total: 8.48 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: -4.14 Total: -0.90 kcal Atomic # 7 Polarization: -60.50 SS G_CDS: -0.03 Total: -60.53 kcal Atomic # 8 Polarization: -9.17 SS G_CDS: 0.06 Total: -9.11 kcal Atomic # 14 Polarization: 20.01 SS G_CDS: -4.67 Total: 15.34 kcal Atomic # 17 Polarization: -0.67 SS G_CDS: -1.50 Total: -2.17 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -33.30 -9.82 -43.11 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000186605564.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 148.984 kcal (2) G-P(sol) polarization free energy of solvation -33.295 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 115.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.816 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.112 kcal (6) G-S(sol) free energy of system = (1) + (5) 105.872 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds