Wall clock time and date at job start Tue Mar 31 2020 06:33:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42893 * 114.00143 * 2 1 4 4 C 1.50708 * 109.47121 * 180.02562 * 3 2 1 5 5 C 1.38253 * 120.03495 * 269.97824 * 4 3 2 6 6 Cl 1.73605 * 119.98017 * 0.03613 * 5 4 3 7 7 C 1.38378 * 120.03968 * 180.02562 * 5 4 3 8 8 C 1.38281 * 120.13032 * 359.97438 * 7 5 4 9 9 C 1.38098 * 120.08018 * 359.74541 * 8 7 5 10 10 C 1.38821 * 120.04381 * 89.99485 * 4 3 2 11 11 N 1.39927 * 120.06705 * 359.95835 * 10 4 3 12 12 C 1.34769 * 120.00503 * 155.45771 * 11 10 4 13 13 O 1.21597 * 119.99776 * 354.37326 * 12 11 10 14 14 N 1.34773 * 120.00562 * 174.37932 * 12 11 10 15 15 C 1.40182 * 120.00564 * 180.02562 * 14 12 11 16 16 C 1.40412 * 125.97060 * 0.02562 * 15 14 12 17 17 C 1.35238 * 107.86732 * 179.77653 * 16 15 14 18 18 N 1.34967 * 107.86334 * 0.36542 * 17 16 15 19 19 C 1.46490 * 125.98004 * 179.89810 * 18 17 16 20 20 C 1.50702 * 109.47283 * 124.71727 * 19 18 17 21 21 H 1.08002 * 119.99957 * 359.97438 * 20 19 18 22 22 C 1.37875 * 120.00047 * 179.97438 * 20 19 18 23 23 N 1.31509 * 120.00225 * 179.71995 * 22 20 19 24 24 Si 1.86799 * 120.00125 * 0.02562 * 22 20 19 25 25 H 1.48502 * 109.46961 * 269.72357 * 24 22 20 26 26 H 1.48501 * 109.47188 * 29.71710 * 24 22 20 27 27 H 1.48497 * 109.47650 * 149.72413 * 24 22 20 28 28 N 1.31204 * 125.97870 * 180.02562 * 15 14 12 29 29 H 1.09001 * 109.47218 * 59.99894 * 1 2 3 30 30 H 1.08995 * 109.47304 * 180.02562 * 1 2 3 31 31 H 1.09000 * 109.46928 * 300.00417 * 1 2 3 32 32 H 1.08998 * 109.47353 * 60.00143 * 3 2 1 33 33 H 1.09010 * 109.46865 * 299.99744 * 3 2 1 34 34 H 1.08002 * 119.93220 * 180.02562 * 7 5 4 35 35 H 1.08001 * 119.95783 * 180.02562 * 8 7 5 36 36 H 1.08003 * 120.02097 * 180.27093 * 9 8 7 37 37 H 0.97008 * 119.99894 * 335.45173 * 11 10 4 38 38 H 0.97003 * 119.99771 * 359.97438 * 14 12 11 39 39 H 1.08001 * 126.06316 * 0.02562 * 16 15 14 40 40 H 1.08002 * 126.07139 * 180.25179 * 17 16 15 41 41 H 1.08997 * 109.47221 * 4.71556 * 19 18 17 42 42 H 1.09002 * 109.47392 * 244.71565 * 19 18 17 43 43 H 0.97001 * 120.00639 * 180.27226 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5126 1.1863 -0.0006 5 6 4.2030 1.1319 1.1960 6 17 3.3386 1.1998 2.7000 7 6 5.5825 1.0232 1.1955 8 6 6.2740 0.9681 -0.0007 9 6 5.5892 1.0162 -1.1990 10 6 4.2050 1.1316 -1.2026 11 7 3.5093 1.1859 -2.4155 12 6 4.1296 1.6230 -3.5292 13 8 5.2599 2.0661 -3.4614 14 7 3.4971 1.5692 -4.7181 15 6 4.1425 2.0235 -5.8767 16 6 5.4403 2.5552 -5.9431 17 6 5.6945 2.8693 -7.2337 18 7 4.5996 2.5580 -7.9589 19 6 4.4446 2.7388 -9.4043 20 6 4.0666 1.4245 -10.0374 21 1 3.9535 0.5426 -9.4243 22 6 3.8650 1.3479 -11.3992 23 7 3.5405 0.1998 -11.9523 24 14 4.0613 2.8731 -12.4597 25 1 2.7570 3.5755 -12.5627 26 1 5.0639 3.7788 -11.8434 27 1 4.5189 2.4776 -13.8159 28 7 3.6395 2.0261 -7.0885 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 -0.3633 0.5139 0.8900 32 1 1.6887 1.8463 0.8900 33 1 1.6886 1.8463 -0.8901 34 1 6.1200 0.9804 2.1313 35 1 7.3506 0.8828 0.0022 36 1 6.1299 0.9687 -2.1327 37 1 2.5805 0.9087 -2.4547 38 1 2.5955 1.2155 -4.7723 39 1 6.1171 2.6861 -5.1117 40 1 6.6103 3.2955 -7.6160 41 1 5.3849 3.0897 -9.8295 42 1 3.6624 3.4731 -9.5969 43 1 3.4026 0.1450 -12.9109 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000195577426.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:33:42 Heat of formation + Delta-G solvation = 50.157302 kcal Electronic energy + Delta-G solvation = -29015.253305 eV Core-core repulsion = 24703.516382 eV Total energy + Delta-G solvation = -4311.736924 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 364.109 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -41.35385 -40.45339 -39.23214 -37.89646 -36.84265 -35.19674 -34.93211 -33.33244 -32.22313 -31.37270 -29.87433 -29.39060 -27.65953 -27.12721 -25.73268 -24.02224 -22.62667 -22.07896 -21.51718 -20.43943 -20.04755 -18.48536 -17.97280 -17.08178 -16.86302 -16.78405 -16.45949 -16.36386 -15.75841 -15.42489 -15.13193 -14.94948 -14.69766 -14.62605 -14.28217 -13.86949 -13.61364 -13.25935 -13.15621 -12.84980 -12.61176 -12.43166 -12.30735 -12.18206 -12.00278 -11.88573 -11.73305 -11.25450 -11.11441 -10.94078 -10.70255 -10.59644 -10.17264 -10.08473 -10.06625 -9.86013 -9.57195 -9.07093 -8.79817 -8.45792 -8.24917 -7.59076 -6.26356 -4.29023 0.78323 0.91022 1.70486 2.12965 2.42883 2.85115 3.13519 3.18503 3.19066 3.20342 3.34867 3.59391 3.71950 4.02843 4.20040 4.37062 4.41066 4.66566 4.82667 4.96027 4.99718 5.00625 5.02599 5.13331 5.20077 5.31706 5.33572 5.37671 5.60187 5.78039 5.84844 5.98861 6.01966 6.17008 6.29471 6.36493 6.46571 6.57409 6.64668 6.69596 6.78123 7.22423 7.28179 7.62772 7.75710 8.24374 8.29554 8.48369 8.82960 9.28313 10.86230 Molecular weight = 364.11amu Principal moments of inertia in cm(-1) A = 0.019726 B = 0.001836 C = 0.001726 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1419.140227 B =15249.670196 C =16222.191585 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.380 6.380 3 C 0.099 3.901 4 C -0.123 4.123 5 C 0.006 3.994 6 Cl -0.065 7.065 7 C -0.137 4.137 8 C -0.076 4.076 9 C -0.129 4.129 10 C 0.210 3.790 11 N -0.678 5.678 12 C 0.715 3.285 13 O -0.546 6.546 14 N -0.635 5.635 15 C 0.275 3.725 16 C -0.282 4.282 17 C 0.053 3.947 18 N -0.318 5.318 19 C 0.232 3.768 20 C -0.535 4.535 21 H 0.086 0.914 22 C 0.076 3.924 23 N -0.887 5.887 24 Si 0.875 3.125 25 H -0.272 1.272 26 H -0.265 1.265 27 H -0.280 1.280 28 N -0.296 5.296 29 H 0.043 0.957 30 H 0.089 0.911 31 H 0.042 0.958 32 H 0.069 0.931 33 H 0.058 0.942 34 H 0.135 0.865 35 H 0.138 0.862 36 H 0.160 0.840 37 H 0.411 0.589 38 H 0.410 0.590 39 H 0.164 0.836 40 H 0.170 0.830 41 H 0.054 0.946 42 H 0.038 0.962 43 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.838 3.123 27.924 28.110 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.299 6.299 3 C 0.023 3.977 4 C -0.128 4.128 5 C -0.022 4.022 6 Cl -0.036 7.036 7 C -0.157 4.157 8 C -0.095 4.095 9 C -0.149 4.149 10 C 0.113 3.887 11 N -0.324 5.324 12 C 0.415 3.585 13 O -0.420 6.420 14 N -0.285 5.285 15 C 0.020 3.980 16 C -0.313 4.313 17 C -0.096 4.096 18 N -0.100 5.100 19 C 0.113 3.887 20 C -0.573 4.573 21 H 0.104 0.896 22 C -0.128 4.128 23 N -0.524 5.524 24 Si 0.701 3.299 25 H -0.197 1.197 26 H -0.189 1.189 27 H -0.206 1.206 28 N -0.126 5.126 29 H 0.062 0.938 30 H 0.107 0.893 31 H 0.061 0.939 32 H 0.087 0.913 33 H 0.076 0.924 34 H 0.153 0.847 35 H 0.156 0.844 36 H 0.177 0.823 37 H 0.248 0.752 38 H 0.246 0.754 39 H 0.181 0.819 40 H 0.187 0.813 41 H 0.072 0.928 42 H 0.056 0.944 43 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -0.886 3.008 26.963 27.145 hybrid contribution -0.599 0.733 -0.201 0.968 sum -1.484 3.741 26.762 27.063 Atomic orbital electron populations 1.22802 0.80660 1.03145 1.00196 1.88004 1.19823 1.26680 1.95435 1.21239 0.88942 0.85847 1.01716 1.18948 0.94558 1.08645 0.90603 1.20422 0.92265 1.03404 0.86062 1.98363 1.77191 1.96646 1.31392 1.21009 0.91646 1.03555 0.99503 1.21083 1.00429 0.97059 0.90940 1.21654 0.92401 1.00238 1.00644 1.17110 0.91433 0.97105 0.83014 1.42575 1.15877 1.67796 1.06186 1.15520 0.84465 0.78927 0.79600 1.90849 1.17010 1.49777 1.84335 1.41300 1.18827 1.64844 1.03493 1.18727 0.92779 1.00667 0.85780 1.21523 0.97487 1.14904 0.97373 1.22565 0.93475 1.01852 0.91709 1.48628 1.08845 1.44338 1.08162 1.20070 0.98437 0.99427 0.70783 1.21100 1.48749 0.94249 0.93244 0.89639 1.24837 0.94260 0.96209 0.97482 1.69867 1.46235 1.24517 1.11782 0.86888 0.79204 0.83274 0.80561 1.19716 1.18948 1.20578 1.77399 1.15228 1.22838 0.97165 0.93817 0.89266 0.93889 0.91272 0.92364 0.84747 0.84420 0.82289 0.75217 0.75437 0.81899 0.81290 0.92814 0.94438 0.92149 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.17 11.01 101.05 1.11 1.29 16 2 O -0.38 -3.45 10.69 -35.23 -0.38 -3.83 16 3 C 0.10 0.83 5.10 36.01 0.18 1.02 16 4 C -0.12 -1.23 5.53 -104.40 -0.58 -1.81 16 5 C 0.01 0.06 6.31 -39.52 -0.25 -0.19 16 6 Cl -0.06 -0.56 27.29 -51.86 -1.42 -1.98 16 7 C -0.14 -1.18 9.83 -39.51 -0.39 -1.56 16 8 C -0.08 -0.68 10.04 -39.62 -0.40 -1.07 16 9 C -0.13 -1.43 8.72 -39.39 -0.34 -1.78 16 10 C 0.21 2.31 6.41 -83.70 -0.54 1.77 16 11 N -0.68 -7.09 4.99 -14.23 -0.07 -7.16 16 12 C 0.71 9.71 8.34 -86.93 -0.72 8.99 16 13 O -0.55 -8.67 10.63 5.28 0.06 -8.62 16 14 N -0.64 -9.15 5.45 -15.51 -0.08 -9.23 16 15 C 0.27 5.18 8.11 -154.38 -1.25 3.93 16 16 C -0.28 -5.17 9.61 -39.83 -0.38 -5.55 16 17 C 0.05 0.98 11.44 -17.24 -0.20 0.78 16 18 N -0.32 -6.95 3.67 -62.57 -0.23 -7.18 16 19 C 0.23 5.35 5.33 -5.20 -0.03 5.32 16 20 C -0.54 -14.83 9.79 -34.44 -0.34 -15.16 16 21 H 0.09 2.69 8.06 -52.49 -0.42 2.27 16 22 C 0.08 2.10 5.47 -17.82 -0.10 2.00 16 23 N -0.89 -26.25 13.96 55.43 0.77 -25.48 16 24 Si 0.87 19.84 27.47 -169.99 -4.67 15.17 16 25 H -0.27 -6.10 7.11 56.52 0.40 -5.70 16 26 H -0.26 -5.56 6.54 56.52 0.37 -5.19 16 27 H -0.28 -6.34 7.11 56.52 0.40 -5.93 16 28 N -0.30 -6.50 12.42 31.44 0.39 -6.11 16 29 H 0.04 0.22 8.14 -51.93 -0.42 -0.20 16 30 H 0.09 0.47 8.14 -51.93 -0.42 0.04 16 31 H 0.04 0.23 8.14 -51.93 -0.42 -0.20 16 32 H 0.07 0.54 6.90 -51.93 -0.36 0.18 16 33 H 0.06 0.42 6.98 -51.92 -0.36 0.06 16 34 H 0.13 0.87 8.06 -52.49 -0.42 0.45 16 35 H 0.14 0.89 8.06 -52.49 -0.42 0.47 16 36 H 0.16 2.00 5.79 -52.48 -0.30 1.70 16 37 H 0.41 3.31 7.41 -40.82 -0.30 3.00 16 38 H 0.41 4.75 8.84 -40.82 -0.36 4.39 16 39 H 0.16 2.87 5.91 -52.49 -0.31 2.56 16 40 H 0.17 2.45 8.06 -52.49 -0.42 2.02 16 41 H 0.05 1.14 7.13 -51.93 -0.37 0.77 16 42 H 0.04 0.85 7.57 -51.93 -0.39 0.46 16 43 H 0.27 7.36 8.31 -40.82 -0.34 7.02 16 LS Contribution 379.83 15.07 5.72 5.72 Total: -1.00 -33.57 379.83 -9.01 -42.57 By element: Atomic # 1 Polarization: 13.06 SS G_CDS: -4.89 Total: 8.17 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -4.21 Total: -2.04 kcal Atomic # 7 Polarization: -55.95 SS G_CDS: 0.78 Total: -55.17 kcal Atomic # 8 Polarization: -12.13 SS G_CDS: -0.32 Total: -12.45 kcal Atomic # 14 Polarization: 19.84 SS G_CDS: -4.67 Total: 15.17 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.42 Total: -1.98 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -33.57 -9.01 -42.57 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000195577426.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.728 kcal (2) G-P(sol) polarization free energy of solvation -33.565 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.571 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.157 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds