Wall clock time and date at job start Tue Mar 31 2020 05:51:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.09001 * 109.42061 * 2 1 4 4 C 1.53046 * 109.44777 * 119.92613 * 2 1 3 5 5 C 1.53380 * 107.89208 * 167.15705 * 4 2 1 6 6 C 1.53001 * 109.60542 * 171.93420 * 5 4 2 7 7 C 1.53002 * 109.60504 * 51.44870 * 5 4 2 8 8 N 1.46398 * 108.68578 * 291.69437 * 5 4 2 9 9 C 1.46901 * 110.99533 * 288.09604 * 8 5 4 10 10 C 1.38567 * 113.22932 * 53.71620 * 8 5 4 11 11 C 1.40200 * 117.45203 * 159.85434 * 10 8 5 12 12 C 1.36260 * 120.67197 * 179.58152 * 11 10 8 13 13 Cl 1.73603 * 120.13187 * 179.60223 * 12 11 10 14 14 C 1.40609 * 119.73193 * 359.88268 * 12 11 10 15 15 C 1.46494 * 120.25720 * 180.17308 * 14 12 11 16 16 N 1.30870 * 120.00428 * 359.97438 * 15 14 12 17 17 N 1.40100 * 119.99941 * 179.97438 * 16 15 14 18 18 C 1.34775 * 119.99516 * 180.02562 * 17 16 15 19 19 O 1.22013 * 120.00291 * 0.02562 * 18 17 16 20 20 C 1.40411 * 119.99554 * 180.02562 * 18 17 16 21 21 H 1.08004 * 120.00317 * 6.27674 * 20 18 17 22 22 C 1.40177 * 120.00062 * 186.28438 * 20 18 17 23 23 N 1.30626 * 119.99450 * 353.71662 * 22 20 18 24 24 Si 1.86790 * 120.00042 * 173.72203 * 22 20 18 25 25 H 1.48503 * 109.47444 * 94.96964 * 24 22 20 26 26 H 1.48503 * 109.47049 * 214.96983 * 24 22 20 27 27 H 1.48496 * 109.47320 * 334.96606 * 24 22 20 28 28 C 1.40183 * 119.47717 * 0.19547 * 14 12 11 29 29 C 1.36942 * 120.36047 * 359.97438 * 28 14 12 30 30 H 1.08997 * 109.47064 * 300.06845 * 1 2 3 31 31 H 1.08992 * 109.47061 * 60.07340 * 1 2 3 32 32 H 1.09004 * 109.46789 * 180.02562 * 1 2 3 33 33 H 1.08995 * 109.77914 * 47.56213 * 4 2 1 34 34 H 1.09002 * 109.82390 * 286.77710 * 4 2 1 35 35 H 1.08991 * 109.47438 * 172.70459 * 6 5 4 36 36 H 1.09001 * 109.46977 * 292.70888 * 6 5 4 37 37 H 1.09007 * 109.47034 * 52.70016 * 6 5 4 38 38 H 1.09002 * 109.47129 * 300.81154 * 7 5 4 39 39 H 1.09008 * 109.46734 * 60.80307 * 7 5 4 40 40 H 1.08997 * 109.47342 * 180.80234 * 7 5 4 41 41 H 1.09004 * 109.46712 * 180.59647 * 9 8 5 42 42 H 1.09008 * 109.47180 * 300.59049 * 9 8 5 43 43 H 1.08997 * 109.47458 * 60.59270 * 9 8 5 44 44 H 1.07996 * 119.66386 * 359.60768 * 11 10 8 45 45 H 1.08000 * 119.99511 * 180.02562 * 15 14 12 46 46 H 0.97001 * 119.99932 * 0.02562 * 17 16 15 47 47 H 0.96997 * 119.99527 * 180.02562 * 23 22 20 48 48 H 1.07998 * 119.81816 * 180.02562 * 28 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8925 1.0280 0.0000 4 6 2.0396 -0.7200 1.2507 5 6 3.5384 -0.9864 1.0633 6 6 4.1315 -1.5227 2.3678 7 6 4.2454 0.3121 0.6697 8 7 3.7090 -1.9797 0.0014 9 6 3.2884 -3.3122 0.4546 10 6 3.0718 -1.6326 -1.1791 11 6 3.5075 -2.2568 -2.3564 12 6 2.9213 -1.9707 -3.5527 13 17 3.4788 -2.7442 -5.0035 14 6 1.8670 -1.0420 -3.6083 15 6 1.2260 -0.7286 -4.8877 16 7 1.6345 -1.3134 -5.9849 17 7 1.0210 -1.0140 -7.2084 18 6 1.4414 -1.6167 -8.3382 19 8 2.3559 -2.4233 -8.2955 20 6 0.8270 -1.3163 -9.5645 21 1 0.0882 -0.5304 -9.6202 22 6 1.1722 -2.0364 -10.7165 23 7 2.1505 -2.9011 -10.6773 24 14 0.2335 -1.7594 -12.3074 25 1 0.9555 -0.7653 -13.1416 26 1 0.1256 -3.0420 -13.0482 27 1 -1.1268 -1.2509 -11.9975 28 6 1.4345 -0.4181 -2.4298 29 6 2.0322 -0.7096 -1.2327 30 1 -0.3633 0.5149 0.8893 31 1 -0.3633 0.5127 -0.8906 32 1 -0.3633 -1.0277 0.0005 33 1 1.5098 -1.6644 1.3742 34 1 1.8836 -0.0921 2.1280 35 1 5.1625 -1.8327 2.1977 36 1 4.1078 -0.7403 3.1263 37 1 3.5466 -2.3770 2.7087 38 1 3.8149 0.6941 -0.2559 39 1 4.1171 1.0501 1.4617 40 1 5.3078 0.1174 0.5233 41 1 3.4355 -4.0328 -0.3500 42 1 3.8834 -3.6066 1.3192 43 1 2.2343 -3.2861 0.7308 44 1 4.3156 -2.9720 -2.3147 45 1 0.4168 -0.0144 -4.9256 46 1 0.2937 -0.3731 -7.2423 47 1 2.3897 -3.3992 -11.4745 48 1 0.6248 0.2957 -2.4661 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000208248264.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:51:51 Heat of formation + Delta-G solvation = 36.674529 kcal Electronic energy + Delta-G solvation = -30314.265378 eV Core-core repulsion = 26203.202803 eV Total energy + Delta-G solvation = -4111.062575 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 363.145 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.38094 -38.18596 -37.41496 -35.83144 -35.20600 -35.07021 -32.89570 -32.44332 -31.02796 -29.90737 -29.30478 -27.59076 -27.02688 -26.36662 -25.45714 -23.32239 -22.79047 -21.35387 -20.63220 -19.75994 -18.40953 -17.53108 -17.00974 -16.59919 -15.85665 -15.62918 -15.46110 -15.09890 -14.84053 -14.49023 -14.26411 -13.94042 -13.77893 -13.48732 -13.32683 -13.12028 -12.83983 -12.65840 -12.63071 -12.50689 -12.30538 -12.21181 -12.07780 -11.93504 -11.71307 -11.55570 -11.39718 -11.30031 -11.18827 -10.88107 -10.76366 -10.68384 -10.64816 -10.56471 -10.53726 -10.35295 -9.34494 -8.95423 -8.84350 -8.46581 -8.17602 -7.69483 -7.07897 -6.37907 -4.91501 0.98962 1.40820 2.76282 2.81704 3.05974 3.12105 3.16376 3.57277 3.76260 3.89442 4.10922 4.32523 4.43555 4.47747 4.49251 4.70049 4.82041 4.94654 4.97780 5.07448 5.15627 5.20642 5.27408 5.28361 5.37337 5.43803 5.44528 5.49095 5.60013 5.61128 5.64549 5.71268 5.72410 5.78986 5.80517 5.86866 5.89968 5.93750 5.99454 6.08705 6.18322 6.38506 6.51223 6.60422 6.79747 6.88478 7.23194 7.32387 7.88535 8.02056 8.71998 8.79283 9.34360 10.41362 10.69716 Molecular weight = 363.15amu Principal moments of inertia in cm(-1) A = 0.023531 B = 0.002164 C = 0.002040 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1189.645168 B =12936.195979 C =13724.829643 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.047 4.047 3 H 0.085 0.915 4 C -0.142 4.142 5 C 0.109 3.891 6 C -0.142 4.142 7 C -0.142 4.142 8 N -0.491 5.491 9 C 0.025 3.975 10 C 0.120 3.880 11 C -0.118 4.118 12 C -0.016 4.016 13 Cl -0.005 7.005 14 C -0.022 4.022 15 C -0.005 4.005 16 N -0.154 5.154 17 N -0.589 5.589 18 C 0.558 3.442 19 O -0.547 6.547 20 C -0.537 4.537 21 H 0.070 0.930 22 C 0.089 3.911 23 N -0.743 5.743 24 Si 0.915 3.085 25 H -0.270 1.270 26 H -0.276 1.276 27 H -0.262 1.262 28 C -0.083 4.083 29 C -0.116 4.116 30 H 0.056 0.944 31 H 0.062 0.938 32 H 0.056 0.944 33 H 0.068 0.932 34 H 0.074 0.926 35 H 0.066 0.934 36 H 0.063 0.937 37 H 0.058 0.942 38 H 0.064 0.936 39 H 0.060 0.940 40 H 0.063 0.937 41 H 0.073 0.927 42 H 0.077 0.923 43 H 0.035 0.965 44 H 0.132 0.868 45 H 0.107 0.893 46 H 0.366 0.634 47 H 0.273 0.727 48 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.121 5.298 26.267 26.819 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.065 4.065 3 H 0.103 0.897 4 C -0.180 4.180 5 C 0.021 3.979 6 C -0.200 4.200 7 C -0.199 4.199 8 N -0.208 5.208 9 C -0.120 4.120 10 C 0.022 3.978 11 C -0.139 4.139 12 C -0.046 4.046 13 Cl 0.025 6.975 14 C -0.025 4.025 15 C -0.213 4.213 16 N 0.035 4.965 17 N -0.335 5.335 18 C 0.366 3.634 19 O -0.426 6.426 20 C -0.574 4.574 21 H 0.088 0.912 22 C -0.135 4.135 23 N -0.370 5.370 24 Si 0.739 3.261 25 H -0.195 1.195 26 H -0.201 1.201 27 H -0.186 1.186 28 C -0.105 4.105 29 C -0.119 4.119 30 H 0.075 0.925 31 H 0.081 0.919 32 H 0.075 0.925 33 H 0.087 0.913 34 H 0.093 0.907 35 H 0.085 0.915 36 H 0.082 0.918 37 H 0.077 0.923 38 H 0.083 0.917 39 H 0.079 0.921 40 H 0.082 0.918 41 H 0.092 0.908 42 H 0.095 0.905 43 H 0.053 0.947 44 H 0.150 0.850 45 H 0.125 0.875 46 H 0.201 0.799 47 H 0.084 0.916 48 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 0.811 3.798 25.378 25.673 hybrid contribution -2.256 1.134 -0.607 2.597 sum -1.445 4.932 24.771 25.298 Atomic orbital electron populations 1.21885 0.94110 1.02242 1.01954 1.20093 0.95857 0.99071 0.91520 0.89725 1.22308 0.96517 1.01271 0.97944 1.21080 0.93894 0.92238 0.90721 1.21950 1.01624 1.01122 0.95280 1.21910 1.01078 0.95129 1.01822 1.58357 1.56091 1.03431 1.02877 1.22557 0.98978 0.88833 1.01668 1.18337 0.92136 0.97132 0.90196 1.20581 1.01087 1.02659 0.89572 1.20966 0.96642 0.97070 0.89923 1.98518 1.87655 1.78505 1.32839 1.18372 0.95443 0.96698 0.92018 1.23842 1.02458 1.03710 0.91246 1.75661 1.14674 1.13787 0.92424 1.48315 1.36162 1.45367 1.03634 1.16684 0.84342 0.81566 0.80765 1.90734 1.30832 1.36269 1.84804 1.19682 1.24935 1.20698 0.92105 0.91219 1.25747 0.93995 0.93564 1.00176 1.70030 1.21086 1.16801 1.29126 0.86236 0.80472 0.78543 0.80887 1.19541 1.20121 1.18631 1.20738 0.99849 0.99638 0.90240 1.19520 0.95939 1.01211 0.95207 0.92465 0.91948 0.92490 0.91292 0.90737 0.91462 0.91827 0.92322 0.91706 0.92123 0.91818 0.90811 0.90475 0.94692 0.84964 0.87527 0.79894 0.91556 0.85200 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.08 8.74 37.16 0.32 -0.76 16 2 C -0.05 -0.40 2.21 -91.67 -0.20 -0.60 16 3 H 0.08 0.68 7.01 -51.93 -0.36 0.32 16 4 C -0.14 -1.06 4.29 -26.51 -0.11 -1.17 16 5 C 0.11 0.89 0.71 -131.68 -0.09 0.79 16 6 C -0.14 -0.89 7.57 37.16 0.28 -0.61 16 7 C -0.14 -1.19 7.94 37.16 0.30 -0.89 16 8 N -0.49 -4.97 4.35 -164.06 -0.71 -5.68 16 9 C 0.02 0.22 8.58 60.07 0.52 0.73 16 10 C 0.12 1.47 4.53 -83.75 -0.38 1.09 16 11 C -0.12 -1.69 8.95 -39.56 -0.35 -2.05 16 12 C -0.02 -0.27 6.32 -39.40 -0.25 -0.52 16 13 Cl 0.00 -0.10 25.75 -51.86 -1.34 -1.44 16 14 C -0.02 -0.35 5.88 -104.95 -0.62 -0.97 16 15 C -0.01 -0.09 10.75 -14.64 -0.16 -0.25 16 16 N -0.15 -3.49 7.67 32.10 0.25 -3.24 16 17 N -0.59 -14.19 6.26 28.87 0.18 -14.01 16 18 C 0.56 16.23 7.64 -15.44 -0.12 16.11 16 19 O -0.55 -18.06 15.22 4.91 0.07 -17.98 16 20 C -0.54 -14.94 9.24 -38.04 -0.35 -15.29 16 21 H 0.07 1.74 7.86 -52.48 -0.41 1.33 16 22 C 0.09 2.42 5.49 -17.34 -0.10 2.33 16 23 N -0.74 -21.86 11.73 55.56 0.65 -21.21 16 24 Si 0.91 19.53 29.56 -169.99 -5.03 14.50 16 25 H -0.27 -5.63 7.11 56.52 0.40 -5.23 16 26 H -0.28 -5.77 7.11 56.52 0.40 -5.37 16 27 H -0.26 -5.40 7.11 56.52 0.40 -5.00 16 28 C -0.08 -1.04 8.77 -39.32 -0.34 -1.38 16 29 C -0.12 -1.31 4.55 -104.69 -0.48 -1.79 16 30 H 0.06 0.35 8.14 -51.93 -0.42 -0.07 16 31 H 0.06 0.46 6.50 -51.93 -0.34 0.12 16 32 H 0.06 0.47 8.14 -51.93 -0.42 0.04 16 33 H 0.07 0.55 6.38 -51.93 -0.33 0.21 16 34 H 0.07 0.45 8.14 -51.93 -0.42 0.03 16 35 H 0.07 0.45 8.14 -51.93 -0.42 0.03 16 36 H 0.06 0.33 8.14 -51.93 -0.42 -0.09 16 37 H 0.06 0.33 6.73 -51.93 -0.35 -0.01 16 38 H 0.06 0.64 5.49 -51.93 -0.29 0.35 16 39 H 0.06 0.40 8.14 -51.92 -0.42 -0.02 16 40 H 0.06 0.57 8.14 -51.93 -0.42 0.15 16 41 H 0.07 0.68 7.63 -51.93 -0.40 0.28 16 42 H 0.08 0.53 6.30 -51.92 -0.33 0.21 16 43 H 0.03 0.30 6.51 -51.93 -0.34 -0.04 16 44 H 0.13 1.79 8.06 -52.49 -0.42 1.37 16 45 H 0.11 1.58 8.03 -52.49 -0.42 1.15 16 46 H 0.37 7.44 8.62 -182.60 -1.57 5.86 16 47 H 0.27 7.22 8.29 -40.82 -0.34 6.88 16 48 H 0.13 1.32 6.46 -52.49 -0.34 0.98 16 LS Contribution 390.89 15.07 5.89 5.89 Total: -1.00 -34.77 390.89 -10.16 -44.92 By element: Atomic # 1 Polarization: 11.47 SS G_CDS: -7.99 Total: 3.47 kcal Atomic # 6 Polarization: -3.10 SS G_CDS: -2.14 Total: -5.23 kcal Atomic # 7 Polarization: -44.51 SS G_CDS: 0.36 Total: -44.14 kcal Atomic # 8 Polarization: -18.06 SS G_CDS: 0.07 Total: -17.98 kcal Atomic # 14 Polarization: 19.53 SS G_CDS: -5.03 Total: 14.50 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -1.34 Total: -1.44 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -34.77 -10.16 -44.92 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000208248264.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.599 kcal (2) G-P(sol) polarization free energy of solvation -34.765 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.834 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.159 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.925 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.675 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds