Wall clock time and date at job start Tue Mar 31 2020 06:08:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.53003 * 112.99762 * 2 1 4 4 N 1.46499 * 109.46889 * 48.18122 * 3 2 1 5 5 C 1.34872 * 125.68874 * 125.31330 * 4 3 2 6 6 C 1.36815 * 106.05287 * 180.16448 * 5 4 3 7 7 C 1.47804 * 126.95699 * 179.84891 * 6 5 4 8 8 O 1.35242 * 119.99806 * 179.71506 * 7 6 5 9 9 N 1.30108 * 119.99770 * 359.71723 * 7 6 5 10 10 C 1.46504 * 119.99642 * 179.97438 * 9 7 6 11 11 C 1.53008 * 109.46954 * 114.99657 * 10 9 7 12 12 C 1.53076 * 109.45095 * 64.79057 * 11 10 9 13 13 C 1.53183 * 109.29478 * 181.24164 * 12 11 10 14 14 N 1.46930 * 108.89468 * 305.57480 * 13 12 11 15 15 C 1.36937 * 120.63259 * 233.51494 * 14 13 12 16 16 H 1.08000 * 119.99761 * 151.83401 * 15 14 13 17 17 C 1.38806 * 120.00219 * 331.83653 * 15 14 13 18 18 N 1.31624 * 120.00191 * 343.07619 * 17 15 14 19 19 Si 1.86800 * 120.00146 * 163.07294 * 17 15 14 20 20 H 1.48506 * 109.46812 * 0.02562 * 19 17 15 21 21 H 1.48499 * 109.47258 * 119.99807 * 19 17 15 22 22 H 1.48499 * 109.47344 * 240.00342 * 19 17 15 23 23 C 1.46925 * 118.73328 * 53.53726 * 14 13 12 24 24 C 1.53033 * 109.45824 * 184.99714 * 11 10 9 25 25 N 1.34722 * 106.08274 * 359.59315 * 6 5 4 26 26 N 1.28623 * 108.68544 * 0.26056 * 25 6 5 27 27 C 1.54035 * 113.92973 * 131.93631 * 2 1 3 28 28 O 1.44179 * 85.51842 * 91.65993 * 27 2 1 29 29 C 1.44177 * 93.33865 * 24.19257 * 28 27 2 30 30 H 1.09000 * 109.47491 * 59.99878 * 1 2 3 31 31 H 1.08999 * 109.47135 * 180.02562 * 1 2 3 32 32 H 1.09002 * 109.47109 * 299.99275 * 1 2 3 33 33 H 1.08999 * 109.47373 * 288.17141 * 3 2 1 34 34 H 1.09001 * 109.46653 * 168.17582 * 3 2 1 35 35 H 1.08001 * 126.97357 * 0.02562 * 5 4 3 36 36 H 0.96701 * 114.00167 * 0.02562 * 8 7 6 37 37 H 1.08997 * 109.47204 * 355.00230 * 10 9 7 38 38 H 1.08997 * 109.47276 * 234.99458 * 10 9 7 39 39 H 1.08990 * 109.46253 * 304.97651 * 11 10 9 40 40 H 1.09005 * 109.39190 * 61.36070 * 12 11 10 41 41 H 1.09004 * 109.62337 * 301.25863 * 12 11 10 42 42 H 1.09005 * 109.58619 * 185.72200 * 13 12 11 43 43 H 1.08998 * 109.58733 * 65.43770 * 13 12 11 44 44 H 0.96995 * 120.00379 * 180.02562 * 18 17 15 45 45 H 1.09001 * 109.58688 * 66.18006 * 23 14 13 46 46 H 1.08996 * 109.58570 * 186.45714 * 23 14 13 47 47 H 1.09003 * 109.49897 * 58.66711 * 24 11 10 48 48 H 1.09004 * 109.50093 * 298.57181 * 24 11 10 49 49 H 1.08999 * 113.86461 * 205.80820 * 27 2 1 50 50 H 1.09000 * 113.86338 * 337.51321 * 27 2 1 51 51 H 1.09001 * 113.86157 * 221.65927 * 29 28 27 52 52 H 1.09004 * 113.97827 * 89.96886 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.1277 1.4084 0.0000 4 7 1.4707 2.2177 1.0294 5 6 2.0938 2.8867 2.0210 6 6 1.1060 3.4971 2.7445 7 6 1.2774 4.3490 3.9401 8 8 0.1958 4.8896 4.5459 9 7 2.4689 4.5790 4.4096 10 6 2.6388 5.4239 5.5943 11 6 3.2032 4.5847 6.7425 12 6 4.6096 4.1025 6.3780 13 6 5.1589 3.2372 7.5165 14 7 5.0854 3.9987 8.7709 15 6 6.1966 4.1616 9.5544 16 1 6.2906 5.0345 10.1833 17 6 7.2021 3.2047 9.5403 18 7 6.9624 2.0053 9.0541 19 14 8.8954 3.6193 10.2114 20 1 8.9055 5.0228 10.6965 21 1 9.2197 2.7051 11.3357 22 1 9.9068 3.4595 9.1359 23 6 3.7968 4.5817 9.1688 24 6 3.2638 5.4349 8.0135 25 7 -0.0541 3.1691 2.1431 26 7 0.2037 2.4130 1.1350 27 6 2.1547 -0.9409 1.0474 28 8 2.1471 -1.9296 -0.0020 29 6 2.1519 -0.9397 -1.0502 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3633 -1.0276 0.0005 32 1 -0.3633 0.5137 0.8901 33 1 1.9747 1.8681 -0.9764 34 1 3.1956 1.3498 0.2106 35 1 3.1567 2.9297 2.2075 36 1 -0.6449 4.6623 4.1256 37 1 1.6738 5.8375 5.8870 38 1 3.3281 6.2365 5.3653 39 1 2.5589 3.7222 6.9128 40 1 5.2604 4.9642 6.2292 41 1 4.5687 3.5143 5.4612 42 1 6.1963 2.9752 7.3084 43 1 4.5633 2.3287 7.6050 44 1 7.6649 1.3365 9.0446 45 1 3.0880 3.7841 9.3913 46 1 3.9349 5.2046 10.0525 47 1 2.2645 5.7952 8.2582 48 1 3.9277 6.2841 7.8519 49 1 3.1538 -0.6442 1.3665 50 1 1.4917 -1.1764 1.8799 51 1 1.4867 -1.1741 -1.8812 52 1 3.1494 -0.6414 -1.3732 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000329523486.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:08:38 Heat of formation + Delta-G solvation = 86.780685 kcal Electronic energy + Delta-G solvation = -32769.781478 eV Core-core repulsion = 28388.308350 eV Total energy + Delta-G solvation = -4381.473128 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 363.206 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -43.77595 -41.24511 -38.98615 -37.57640 -35.69467 -34.71111 -33.01563 -32.42132 -31.63116 -30.35196 -29.65886 -28.21436 -27.20344 -27.01800 -26.21936 -24.64126 -23.27576 -22.27068 -22.02251 -21.19658 -20.25540 -19.74649 -18.94866 -18.63510 -17.54909 -17.03283 -16.66499 -16.51684 -16.21645 -15.94427 -15.90464 -14.96991 -14.82793 -14.62034 -14.23375 -13.92955 -13.85595 -13.68411 -13.38604 -13.26067 -13.08261 -12.90556 -12.67742 -12.52711 -12.39597 -12.23156 -12.05235 -11.64159 -11.52497 -11.47553 -11.24512 -11.20998 -10.90996 -10.65952 -10.63397 -10.49613 -10.24690 -10.16743 -10.07428 -9.98435 -9.92944 -9.66533 -9.37327 -9.16511 -8.70357 -8.39045 -6.56815 -5.71127 -3.13135 1.00059 1.46892 1.72462 2.92898 3.04516 3.27609 3.40664 3.45590 3.48255 3.50869 3.68513 3.82077 4.04433 4.29088 4.42179 4.54586 4.55680 4.56688 4.68126 4.76680 4.94078 4.97282 5.22935 5.25019 5.28134 5.32665 5.40357 5.44425 5.48100 5.52251 5.54692 5.57480 5.72284 5.80630 5.81422 6.05573 6.07803 6.11576 6.27133 6.36079 6.49257 6.66889 6.80575 6.86431 6.98560 7.02884 7.11099 7.39937 7.51462 7.77657 7.80499 7.87209 8.00426 8.53691 9.29976 9.94005 10.51664 11.37093 Molecular weight = 363.21amu Principal moments of inertia in cm(-1) A = 0.010414 B = 0.002132 C = 0.001834 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2688.022270 B =13129.611981 C =15261.158519 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.146 4.146 3 C 0.119 3.881 4 N -0.288 5.288 5 C 0.024 3.976 6 C -0.018 4.018 7 C 0.407 3.593 8 O -0.505 6.505 9 N -0.505 5.505 10 C 0.053 3.947 11 C -0.068 4.068 12 C -0.125 4.125 13 C 0.171 3.829 14 N -0.593 5.593 15 C -0.247 4.247 16 H 0.064 0.936 17 C -0.001 4.001 18 N -0.903 5.903 19 Si 0.900 3.100 20 H -0.278 1.278 21 H -0.291 1.291 22 H -0.290 1.290 23 C 0.147 3.853 24 C -0.127 4.127 25 N -0.257 5.257 26 N -0.069 5.069 27 C 0.042 3.958 28 O -0.372 6.372 29 C 0.052 3.948 30 H 0.068 0.932 31 H 0.065 0.935 32 H 0.085 0.915 33 H 0.109 0.891 34 H 0.116 0.884 35 H 0.207 0.793 36 H 0.405 0.595 37 H 0.052 0.948 38 H 0.080 0.920 39 H 0.058 0.942 40 H 0.050 0.950 41 H 0.055 0.945 42 H 0.084 0.916 43 H 0.013 0.987 44 H 0.252 0.748 45 H 0.014 0.986 46 H 0.052 0.948 47 H 0.048 0.952 48 H 0.058 0.942 49 H 0.088 0.912 50 H 0.095 0.905 51 H 0.098 0.902 52 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.169 -1.276 -23.942 27.355 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.147 4.147 3 C -0.001 4.001 4 N -0.080 5.080 5 C -0.130 4.130 6 C -0.156 4.156 7 C 0.178 3.822 8 O -0.300 6.300 9 N -0.241 5.241 10 C -0.075 4.075 11 C -0.087 4.087 12 C -0.164 4.164 13 C 0.045 3.955 14 N -0.316 5.316 15 C -0.377 4.377 16 H 0.082 0.918 17 C -0.199 4.199 18 N -0.548 5.548 19 Si 0.730 3.270 20 H -0.203 1.203 21 H -0.218 1.218 22 H -0.216 1.216 23 C 0.020 3.980 24 C -0.166 4.166 25 N -0.126 5.126 26 N -0.048 5.048 27 C -0.034 4.034 28 O -0.290 6.290 29 C -0.026 4.026 30 H 0.087 0.913 31 H 0.084 0.916 32 H 0.103 0.897 33 H 0.127 0.873 34 H 0.134 0.866 35 H 0.223 0.777 36 H 0.259 0.741 37 H 0.071 0.929 38 H 0.098 0.902 39 H 0.076 0.924 40 H 0.069 0.931 41 H 0.073 0.927 42 H 0.102 0.898 43 H 0.031 0.969 44 H 0.062 0.938 45 H 0.032 0.968 46 H 0.071 0.929 47 H 0.066 0.934 48 H 0.077 0.923 49 H 0.106 0.894 50 H 0.113 0.887 51 H 0.117 0.883 52 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -13.246 -1.866 -24.205 27.655 hybrid contribution 0.923 0.609 0.695 1.306 sum -12.323 -1.257 -23.510 26.574 Atomic orbital electron populations 1.21798 0.90031 1.02815 1.04504 1.24176 0.99705 0.92736 0.98113 1.22420 0.97504 0.89918 0.90301 1.47152 1.05986 1.33212 1.21644 1.23758 1.01847 0.97261 0.90116 1.20232 0.90348 1.05523 0.99449 1.20573 0.84320 0.89495 0.87815 1.84928 1.18161 1.70817 1.56070 1.72815 1.15203 1.20054 1.15989 1.22120 1.00413 0.95532 0.89463 1.21030 0.97865 0.97229 0.92589 1.22120 0.94427 1.00410 0.99493 1.20774 1.00965 0.90731 0.83035 1.44085 1.04478 1.62003 1.21076 1.19234 0.95623 1.02090 1.20772 0.91779 1.25038 0.99660 0.94608 1.00560 1.70057 1.31880 1.02526 1.50375 0.86249 0.84778 0.77766 0.78164 1.20300 1.21826 1.21630 1.20868 0.88398 0.94516 0.94202 1.22034 0.99387 0.98906 0.96317 1.75307 1.23389 1.10323 1.03595 1.78172 0.96177 1.14832 1.15657 1.24191 1.00761 0.86130 0.92364 1.89758 1.95676 1.26980 1.16581 1.24021 1.00558 0.85761 0.92235 0.91333 0.91570 0.89688 0.87319 0.86583 0.77655 0.74095 0.92922 0.90165 0.92374 0.93140 0.92651 0.89760 0.96910 0.93837 0.96763 0.92942 0.93371 0.92313 0.89430 0.88665 0.88336 0.89539 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 19. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.82 8.21 37.15 0.30 -0.52 16 2 C -0.15 -0.71 1.23 -153.43 -0.19 -0.90 16 3 C 0.12 0.45 6.03 -4.04 -0.02 0.43 16 4 N -0.29 -2.14 3.41 -60.99 -0.21 -2.35 16 5 C 0.02 0.21 11.31 -16.73 -0.19 0.02 16 6 C -0.02 -0.20 7.07 -83.20 -0.59 -0.79 16 7 C 0.41 5.26 7.98 -14.37 -0.11 5.15 16 8 O -0.50 -6.11 12.00 -17.42 -0.21 -6.31 16 9 N -0.51 -7.42 9.73 -59.25 -0.58 -8.00 16 10 C 0.05 0.84 5.73 -4.04 -0.02 0.81 16 11 C -0.07 -1.23 2.35 -90.56 -0.21 -1.45 16 12 C -0.13 -2.52 5.27 -26.60 -0.14 -2.66 16 13 C 0.17 4.23 5.30 -3.71 -0.02 4.21 16 14 N -0.59 -15.45 3.00 -172.33 -0.52 -15.96 16 15 C -0.25 -6.98 9.58 -15.06 -0.14 -7.12 16 16 H 0.06 1.78 7.89 -52.49 -0.41 1.36 16 17 C 0.00 -0.01 4.92 -17.43 -0.09 -0.10 16 18 N -0.90 -26.78 11.20 55.49 0.62 -26.16 16 19 Si 0.90 22.05 29.59 -169.99 -5.03 17.03 16 20 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 21 H -0.29 -7.18 7.11 56.52 0.40 -6.78 16 22 H -0.29 -7.08 7.11 56.52 0.40 -6.68 16 23 C 0.15 3.23 6.52 -3.71 -0.02 3.21 16 24 C -0.13 -2.33 5.36 -26.62 -0.14 -2.47 16 25 N -0.26 -2.87 11.99 33.01 0.40 -2.47 16 26 N -0.07 -0.67 9.73 60.35 0.59 -0.08 16 27 C 0.04 0.28 8.36 37.61 0.31 0.59 16 28 O -0.37 -3.04 12.37 -35.23 -0.44 -3.48 16 29 C 0.05 0.22 8.36 37.61 0.31 0.53 16 30 H 0.07 0.37 8.14 -51.93 -0.42 -0.06 16 31 H 0.07 0.43 8.09 -51.93 -0.42 0.01 16 32 H 0.08 0.70 5.68 -51.93 -0.30 0.40 16 33 H 0.11 0.23 8.14 -51.93 -0.42 -0.20 16 34 H 0.12 0.18 7.85 -51.93 -0.41 -0.23 16 35 H 0.21 1.44 8.06 -52.49 -0.42 1.02 16 36 H 0.40 3.44 8.44 45.56 0.38 3.82 16 37 H 0.05 0.81 6.74 -51.93 -0.35 0.46 16 38 H 0.08 1.24 8.14 -51.93 -0.42 0.82 16 39 H 0.06 1.13 8.14 -51.93 -0.42 0.71 16 40 H 0.05 1.04 8.14 -51.93 -0.42 0.62 16 41 H 0.05 1.04 7.72 -51.93 -0.40 0.64 16 42 H 0.08 2.32 6.06 -51.93 -0.31 2.01 16 43 H 0.01 0.34 8.14 -51.93 -0.42 -0.09 16 44 H 0.25 7.17 8.31 -40.82 -0.34 6.83 16 45 H 0.01 0.32 8.14 -51.93 -0.42 -0.10 16 46 H 0.05 1.12 7.93 -51.93 -0.41 0.71 16 47 H 0.05 0.78 8.14 -51.93 -0.42 0.35 16 48 H 0.06 1.09 8.14 -51.93 -0.42 0.67 16 49 H 0.09 0.47 7.96 -51.93 -0.41 0.06 16 50 H 0.10 0.70 8.10 -51.93 -0.42 0.28 16 51 H 0.10 0.32 8.10 -51.93 -0.42 -0.10 16 52 H 0.09 0.19 8.10 -51.93 -0.42 -0.23 16 LS Contribution 416.19 15.07 6.27 6.27 Total: -1.00 -34.78 416.19 -7.73 -42.51 By element: Atomic # 1 Polarization: 7.74 SS G_CDS: -7.67 Total: 0.07 kcal Atomic # 6 Polarization: -0.09 SS G_CDS: -0.96 Total: -1.06 kcal Atomic # 7 Polarization: -55.33 SS G_CDS: 0.30 Total: -55.03 kcal Atomic # 8 Polarization: -9.15 SS G_CDS: -0.64 Total: -9.79 kcal Atomic # 14 Polarization: 22.05 SS G_CDS: -5.03 Total: 17.03 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -34.78 -7.73 -42.51 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000329523486.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 129.291 kcal (2) G-P(sol) polarization free energy of solvation -34.781 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 94.510 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.729 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.510 kcal (6) G-S(sol) free energy of system = (1) + (5) 86.781 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds