Wall clock time and date at job start Tue Mar 31 2020 07:28:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35953 * 116.99351 * 2 1 4 4 C 1.37962 * 119.99152 * 0.02562 * 3 2 1 5 5 C 1.40261 * 119.84015 * 180.02562 * 4 3 2 6 6 C 1.46380 * 120.09695 * 180.02562 * 5 4 3 7 7 C 1.37864 * 119.99819 * 150.60982 * 6 5 4 8 8 C 1.43194 * 120.00069 * 353.19149 * 7 6 5 9 9 N 6.65090 * 111.32027 * 17.87444 * 2 1 3 10 10 C 1.47121 * 119.99920 * 173.18524 * 7 6 5 11 11 N 1.34777 * 120.00096 * 179.97438 * 10 7 6 12 12 O 1.21653 * 119.99900 * 0.02562 * 10 7 6 13 13 C 1.40297 * 119.80291 * 0.27799 * 5 4 3 14 14 C 1.37600 * 119.97168 * 359.44179 * 13 5 4 15 15 Br 1.89101 * 119.92096 * 180.30173 * 14 13 5 16 16 C 1.39249 * 120.16299 * 0.55995 * 14 13 5 17 17 O 1.35551 * 119.90210 * 179.73972 * 16 14 13 18 18 C 1.34713 * 117.00104 * 269.97475 * 17 16 14 19 19 H 1.07998 * 120.00201 * 0.02562 * 18 17 16 20 20 C 1.38764 * 120.00411 * 180.02562 * 18 17 16 21 21 N 1.31476 * 120.00701 * 180.02562 * 20 18 17 22 22 Si 1.86802 * 119.99670 * 0.02562 * 20 18 17 23 23 H 1.48500 * 109.47502 * 89.99606 * 22 20 18 24 24 H 1.48502 * 109.47093 * 210.00049 * 22 20 18 25 25 H 1.48505 * 109.46861 * 329.99725 * 22 20 18 26 26 H 1.09004 * 109.47354 * 180.02562 * 1 2 3 27 27 H 1.09006 * 109.46955 * 299.99749 * 1 2 3 28 28 H 1.08990 * 109.47745 * 60.00110 * 1 2 3 29 29 H 1.07999 * 120.08088 * 0.04620 * 4 3 2 30 30 H 1.08002 * 119.99913 * 330.88526 * 6 5 4 31 31 H 0.96997 * 119.99502 * 0.02562 * 11 10 7 32 32 H 0.96993 * 120.00314 * 180.02562 * 11 10 7 33 33 H 1.08006 * 120.01542 * 179.72644 * 13 5 4 34 34 H 0.97001 * 120.00782 * 180.02562 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2114 0.0000 4 6 1.2944 2.3683 0.0005 5 6 1.9343 3.6164 0.0000 6 6 1.1422 4.8474 0.0011 7 6 1.6448 5.9898 0.5867 8 6 2.8738 5.9375 1.3197 9 7 3.8471 5.8967 1.9017 10 6 0.9185 7.2628 0.4582 11 7 1.4095 8.3796 1.0311 12 8 -0.1257 7.3072 -0.1643 13 6 3.3357 3.6815 -0.0070 14 6 4.0777 2.5227 -0.0017 15 35 5.9666 2.6121 -0.0025 16 6 3.4411 1.2842 -0.0011 17 8 4.1773 0.1460 -0.0012 18 6 4.5084 -0.3681 -1.2016 19 1 4.1886 0.1256 -2.1073 20 6 5.2605 -1.5320 -1.2743 21 7 5.5841 -2.0335 -2.4458 22 14 5.8130 -2.3864 0.2922 23 1 4.7835 -3.3726 0.7079 24 1 7.0992 -3.0870 0.0467 25 1 5.9958 -1.3786 1.3676 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5137 -0.8899 29 1 0.2158 2.3130 0.0017 30 1 0.1623 4.8594 -0.4528 31 1 2.2420 8.3441 1.5277 32 1 0.9305 9.2188 0.9467 33 1 3.8320 4.6407 -0.0119 34 1 6.1095 -2.8473 -2.4967 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000002799492.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:28:39 Heat of formation + Delta-G solvation = -9.570810 kcal Electronic energy + Delta-G solvation = -23740.081770 eV Core-core repulsion = 19880.056737 eV Total energy + Delta-G solvation = -3860.025033 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 366.005 amu Computer time = 2.38 seconds Orbital eigenvalues (eV) -40.41140 -39.81890 -37.88758 -37.49499 -36.35994 -33.97007 -33.65678 -32.04086 -31.53359 -29.42303 -28.88312 -27.14331 -25.55672 -23.94863 -22.39854 -21.51083 -21.34206 -18.83675 -18.12657 -17.88472 -17.15179 -16.72970 -16.56760 -15.56212 -15.43947 -15.17785 -14.92959 -14.57951 -14.20232 -14.07255 -13.89769 -13.47533 -13.34959 -13.11253 -12.79891 -12.39374 -12.26647 -11.97054 -11.93344 -11.35814 -11.28882 -11.04630 -10.74226 -10.49508 -10.38837 -10.22137 -10.09102 -9.73496 -9.63069 -9.48631 -8.41613 -8.36691 -7.78423 -6.13005 -3.87100 -0.04499 1.26266 1.59525 2.01134 2.40114 2.44779 3.12074 3.30781 3.36482 3.39495 3.47871 3.56422 3.63947 3.68137 4.28895 4.45775 4.66687 4.79293 4.92598 5.01153 5.05437 5.18165 5.25199 5.30352 5.39781 5.57600 5.58354 5.83516 6.05965 6.15746 6.27165 6.38179 6.48909 6.89620 7.26381 7.49626 7.81390 7.85236 8.22494 9.21744 9.72343 10.97718 Molecular weight = 366.00amu Principal moments of inertia in cm(-1) A = 0.013774 B = 0.003953 C = 0.003254 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2032.292837 B = 7082.224498 C = 8601.555929 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.284 6.284 3 C 0.102 3.898 4 C -0.150 4.150 5 C -0.106 4.106 6 C 0.098 3.902 7 C -0.155 4.155 8 C 0.244 3.756 9 N -0.401 5.401 10 C 0.585 3.415 11 N -0.850 5.850 12 O -0.537 6.537 13 C -0.083 4.083 14 C -0.093 4.093 15 Br -0.020 7.020 16 C 0.185 3.815 17 O -0.251 6.251 18 C -0.359 4.359 19 H 0.087 0.913 20 C 0.064 3.936 21 N -0.898 5.898 22 Si 0.894 3.106 23 H -0.278 1.278 24 H -0.287 1.287 25 H -0.260 1.260 26 H 0.100 0.900 27 H 0.052 0.948 28 H 0.055 0.945 29 H 0.142 0.858 30 H 0.165 0.835 31 H 0.402 0.598 32 H 0.408 0.592 33 H 0.135 0.865 34 H 0.273 0.727 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.738 15.450 6.129 19.264 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.196 6.196 3 C 0.054 3.946 4 C -0.170 4.170 5 C -0.107 4.107 6 C 0.075 3.925 7 C -0.162 4.162 8 C -0.070 4.070 9 N -0.078 5.078 10 C 0.371 3.629 11 N -0.412 5.412 12 O -0.415 6.415 13 C -0.103 4.103 14 C -0.174 4.174 15 Br 0.067 6.933 16 C 0.135 3.865 17 O -0.163 6.163 18 C -0.434 4.434 19 H 0.104 0.896 20 C -0.135 4.135 21 N -0.541 5.541 22 Si 0.721 3.279 23 H -0.204 1.204 24 H -0.213 1.213 25 H -0.184 1.184 26 H 0.119 0.881 27 H 0.070 0.930 28 H 0.073 0.927 29 H 0.160 0.840 30 H 0.182 0.818 31 H 0.230 0.770 32 H 0.239 0.761 33 H 0.153 0.847 34 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -7.910 14.851 6.691 18.108 hybrid contribution -0.524 0.024 0.469 0.704 sum -8.434 14.875 7.160 18.538 Atomic orbital electron populations 1.23115 0.79239 1.04163 1.00799 1.86372 1.20289 1.24963 1.88015 1.19413 0.91674 0.84988 0.98522 1.21330 1.00109 0.90556 1.04971 1.18465 0.92300 0.92201 1.07754 1.23154 0.96990 0.88142 0.84264 1.18111 0.93337 0.95736 1.09019 1.25401 0.92922 0.94766 0.93957 1.81326 1.10360 1.06158 1.09924 1.17469 0.83979 0.83219 0.78267 1.43686 1.28858 1.11529 1.57160 1.90885 1.22918 1.85780 1.41942 1.21304 0.92367 0.97468 0.99210 1.22108 0.92350 0.94384 1.08536 1.96690 1.00644 1.98618 1.97396 1.18235 0.87161 0.87659 0.93419 1.83424 1.67682 1.34268 1.30949 1.20238 1.34111 1.08600 0.80453 0.89571 1.24161 0.96325 0.95773 0.97282 1.69598 1.39461 1.22226 1.22831 0.86340 0.77813 0.79950 0.83824 1.20355 1.21285 1.18365 0.88131 0.92971 0.92678 0.84025 0.81769 0.76973 0.76094 0.84750 0.91681 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 26. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.26 9.81 101.05 0.99 1.25 16 2 O -0.28 -5.19 10.28 -34.22 -0.35 -5.54 16 3 C 0.10 1.84 6.70 -39.14 -0.26 1.58 16 4 C -0.15 -2.03 8.78 -38.92 -0.34 -2.37 16 5 C -0.11 -1.39 5.59 -105.09 -0.59 -1.98 16 6 C 0.10 0.97 9.46 -36.44 -0.34 0.62 16 7 C -0.16 -1.55 5.84 -104.51 -0.61 -2.16 16 8 C 0.24 2.83 10.47 -22.52 -0.24 2.59 16 9 N -0.40 -5.47 17.91 41.79 0.75 -4.72 16 10 C 0.58 5.59 8.02 -12.66 -0.10 5.49 16 11 N -0.85 -5.47 8.83 30.36 0.27 -5.20 16 12 O -0.54 -6.62 17.14 5.23 0.09 -6.53 16 13 C -0.08 -1.31 8.03 -39.04 -0.31 -1.62 16 14 C -0.09 -1.81 6.23 -39.44 -0.25 -2.05 16 15 Br -0.02 -0.38 33.08 -68.01 -2.25 -2.63 16 16 C 0.18 3.98 5.60 -38.66 -0.22 3.76 16 17 O -0.25 -6.44 7.60 -13.64 -0.10 -6.55 16 18 C -0.36 -10.07 10.22 30.93 0.32 -9.76 16 19 H 0.09 2.58 7.99 -52.49 -0.42 2.16 16 20 C 0.06 1.84 5.50 -17.51 -0.10 1.75 16 21 N -0.90 -26.79 13.96 55.48 0.77 -26.01 16 22 Si 0.89 22.59 28.62 -169.99 -4.86 17.73 16 23 H -0.28 -6.91 7.11 56.52 0.40 -6.50 16 24 H -0.29 -7.05 7.11 56.52 0.40 -6.65 16 25 H -0.26 -6.59 7.11 56.52 0.40 -6.18 16 26 H 0.10 1.01 8.14 -51.93 -0.42 0.59 16 27 H 0.05 0.48 7.66 -51.93 -0.40 0.08 16 28 H 0.05 0.54 7.66 -51.93 -0.40 0.14 16 29 H 0.14 1.36 6.28 -52.49 -0.33 1.03 16 30 H 0.16 1.24 7.61 -52.49 -0.40 0.84 16 31 H 0.40 2.19 7.71 -40.82 -0.31 1.87 16 32 H 0.41 1.88 8.93 -40.82 -0.36 1.51 16 33 H 0.13 1.99 5.35 -52.48 -0.28 1.71 16 34 H 0.27 7.63 8.31 -40.82 -0.34 7.29 16 LS Contribution 334.59 15.07 5.04 5.04 Total: -1.00 -34.28 334.59 -5.16 -39.44 By element: Atomic # 1 Polarization: 0.34 SS G_CDS: -2.46 Total: -2.12 kcal Atomic # 6 Polarization: -0.84 SS G_CDS: -2.05 Total: -2.89 kcal Atomic # 7 Polarization: -37.73 SS G_CDS: 1.79 Total: -35.94 kcal Atomic # 8 Polarization: -18.25 SS G_CDS: -0.37 Total: -18.62 kcal Atomic # 14 Polarization: 22.59 SS G_CDS: -4.86 Total: 17.73 kcal Atomic # 35 Polarization: -0.38 SS G_CDS: -2.25 Total: -2.63 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -34.28 -5.16 -39.44 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000002799492.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.864 kcal (2) G-P(sol) polarization free energy of solvation -34.280 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.415 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.155 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.435 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.38 seconds