Wall clock time and date at job start Tue Mar 31 2020 05:28:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38132 * 119.97050 * 2 1 4 4 C 1.38843 * 119.94357 * 179.97438 * 3 2 1 5 5 N 1.39969 * 120.05568 * 179.97438 * 4 3 2 6 6 C 1.46502 * 120.00191 * 292.34954 * 5 4 3 7 7 C 1.50700 * 109.47337 * 270.00292 * 6 5 4 8 8 H 1.07999 * 119.99771 * 359.97438 * 7 6 5 9 9 C 1.37877 * 120.00081 * 179.97438 * 7 6 5 10 10 N 1.31515 * 119.99839 * 359.97438 * 9 7 6 11 11 Si 1.86801 * 119.99975 * 180.02562 * 9 7 6 12 12 H 1.48502 * 109.47189 * 90.00173 * 11 9 7 13 13 H 1.48504 * 109.46940 * 210.00073 * 11 9 7 14 14 H 1.48498 * 109.47286 * 329.99985 * 11 9 7 15 15 C 1.34770 * 120.00152 * 112.35603 * 5 4 3 16 16 O 1.21293 * 120.00197 * 5.04446 * 15 5 4 17 17 C 1.50698 * 120.00513 * 185.04717 * 15 5 4 18 18 N 1.46896 * 109.47449 * 186.53370 * 17 15 5 19 19 C 1.46853 * 110.99803 * 66.76661 * 18 17 15 20 20 C 1.53040 * 109.51353 * 185.84225 * 19 18 17 21 21 C 1.53116 * 109.28291 * 300.80617 * 20 19 18 22 22 C 1.52997 * 109.57758 * 177.60106 * 21 20 19 23 23 C 1.53120 * 109.15004 * 57.66555 * 21 20 19 24 24 C 1.46852 * 111.00067 * 190.97281 * 18 17 15 25 25 C 1.38881 * 119.88219 * 0.25116 * 4 3 2 26 26 C 1.38090 * 119.94489 * 359.46939 * 25 4 3 27 27 C 1.38355 * 119.97171 * 179.97438 * 2 1 3 28 28 Cl 1.73602 * 119.94602 * 0.02562 * 27 2 1 29 29 H 1.09000 * 109.47271 * 90.00693 * 1 2 3 30 30 H 1.09003 * 109.47102 * 210.00464 * 1 2 3 31 31 H 1.09002 * 109.47712 * 330.00053 * 1 2 3 32 32 H 1.08000 * 120.02432 * 359.94970 * 3 2 1 33 33 H 1.08998 * 109.46758 * 30.00318 * 6 5 4 34 34 H 1.08997 * 109.47276 * 150.00070 * 6 5 4 35 35 H 0.97007 * 119.99493 * 180.02562 * 10 9 7 36 36 H 1.09001 * 109.47010 * 66.53330 * 17 15 5 37 37 H 1.09008 * 109.46756 * 306.53621 * 17 15 5 38 38 H 1.09002 * 109.46171 * 305.85383 * 19 18 17 39 39 H 1.08994 * 109.46063 * 65.83290 * 19 18 17 40 40 H 1.09007 * 109.49880 * 60.75843 * 20 19 18 41 41 H 1.08996 * 109.50440 * 180.87117 * 20 19 18 42 42 H 1.09000 * 109.53136 * 297.76639 * 21 20 19 43 43 H 1.09001 * 109.46982 * 300.29328 * 22 21 20 44 44 H 1.08993 * 109.47216 * 60.29472 * 22 21 20 45 45 H 1.08999 * 109.47013 * 180.29706 * 22 21 20 46 46 H 1.09003 * 109.49988 * 182.40052 * 23 21 20 47 47 H 1.08994 * 109.53468 * 62.30959 * 23 21 20 48 48 H 1.09000 * 109.46336 * 294.17437 * 24 18 17 49 49 H 1.08995 * 109.46259 * 54.15743 * 24 18 17 50 50 H 1.08007 * 120.02670 * 179.72471 * 25 4 3 51 51 H 1.08001 * 119.97162 * 180.27469 * 26 25 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1970 1.1966 0.0000 4 6 3.5855 1.1960 0.0005 5 7 4.2870 2.4071 0.0000 6 6 4.2372 3.2820 -1.1740 7 6 5.3574 2.9230 -2.1160 8 1 6.0385 2.1233 -1.8651 9 6 5.5126 3.6153 -3.2982 10 7 4.6828 4.5887 -3.6040 11 14 6.9007 3.1698 -4.4662 12 1 6.4303 2.1355 -5.4224 13 1 7.3250 4.3799 -5.2151 14 1 8.0502 2.6398 -3.6897 15 6 5.0085 2.7684 1.0794 16 8 5.1250 2.0047 2.0145 17 6 5.6707 4.1214 1.1249 18 7 6.5167 4.2126 2.3223 19 6 7.6533 3.2867 2.2353 20 6 8.4277 3.3026 3.5552 21 6 8.9239 4.7241 3.8334 22 6 9.6477 4.7600 5.1808 23 6 7.7252 5.6762 3.8708 24 6 6.9710 5.5917 2.5419 25 6 4.2768 -0.0085 -0.0042 26 6 3.5822 -1.2020 0.0016 27 6 2.1982 -1.1985 0.0005 28 17 1.3280 -2.7007 0.0005 29 1 -0.3634 -0.0001 -1.0277 30 1 -0.3633 -0.8900 0.5139 31 1 -0.3634 0.8900 0.5138 32 1 1.6569 2.1319 -0.0008 33 1 3.2810 3.1550 -1.6814 34 1 4.3462 4.3197 -0.8588 35 1 4.7918 5.0756 -4.4359 36 1 4.9072 4.8986 1.1594 37 1 6.2853 4.2552 0.2346 38 1 7.2866 2.2787 2.0414 39 1 8.3122 3.5959 1.4239 40 1 7.7730 2.9804 4.3650 41 1 9.2802 2.6270 3.4851 42 1 9.6090 5.0321 3.0435 43 1 8.9625 4.4499 5.9697 44 1 10.5007 4.0821 5.1531 45 1 9.9955 5.7738 5.3795 46 1 8.0756 6.6966 4.0262 47 1 7.0595 5.3921 4.6858 48 1 7.6331 5.8899 1.7290 49 1 6.1087 6.2578 2.5709 50 1 5.3569 -0.0117 -0.0083 51 1 4.1195 -2.1389 0.0024 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000028928015.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:28:10 Heat of formation + Delta-G solvation = -25.747808 kcal Electronic energy + Delta-G solvation = -31240.015058 eV Core-core repulsion = 27164.360079 eV Total energy + Delta-G solvation = -4075.654978 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 364.166 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -40.16021 -39.08131 -38.02466 -36.29291 -35.06886 -34.32802 -32.85593 -32.33454 -30.67724 -30.11610 -28.73343 -27.29740 -26.67287 -25.60458 -23.22031 -23.01942 -22.36827 -21.75991 -21.20222 -19.53176 -18.56422 -16.92350 -16.71106 -16.40075 -15.90000 -15.59689 -15.36717 -14.94559 -14.56939 -14.42470 -14.18853 -14.06293 -13.93830 -13.77506 -13.65865 -12.94984 -12.81665 -12.69939 -12.49886 -12.36503 -12.26245 -12.24440 -11.96524 -11.81287 -11.71711 -11.55738 -11.42832 -11.21521 -11.16936 -11.03358 -11.01913 -10.84964 -10.60534 -10.56147 -10.30810 -10.20765 -10.14722 -9.89648 -9.17928 -8.67587 -8.61736 -8.47514 -7.99564 -7.70945 -6.29061 -4.36828 1.42228 1.58529 2.33390 3.16399 3.20548 3.24054 3.28485 3.52564 3.90784 4.22140 4.29044 4.80635 4.86473 4.88266 4.96453 5.01489 5.04972 5.20066 5.38926 5.43880 5.46958 5.53874 5.58943 5.61949 5.67473 5.69843 5.71368 5.72398 5.75732 5.80634 5.82724 5.94160 5.98675 6.00167 6.09029 6.13663 6.14831 6.21137 6.26196 6.34010 6.36199 6.52848 6.52995 6.67059 6.77017 6.95517 7.04261 7.22437 7.36674 7.55320 7.66769 7.91098 8.09207 8.66585 8.89421 9.31387 10.77758 Molecular weight = 364.17amu Principal moments of inertia in cm(-1) A = 0.007079 B = 0.003400 C = 0.002579 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3954.166950 B = 8232.307573 C =10855.925948 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.070 4.070 3 C -0.115 4.115 4 C 0.189 3.811 5 N -0.567 5.567 6 C 0.240 3.760 7 C -0.540 4.540 8 H 0.061 0.939 9 C 0.068 3.932 10 N -0.889 5.889 11 Si 0.896 3.104 12 H -0.278 1.278 13 H -0.284 1.284 14 H -0.273 1.273 15 C 0.525 3.475 16 O -0.538 6.538 17 C 0.042 3.958 18 N -0.522 5.522 19 C 0.054 3.946 20 C -0.106 4.106 21 C -0.096 4.096 22 C -0.144 4.144 23 C -0.108 4.108 24 C 0.056 3.944 25 C -0.097 4.097 26 C -0.099 4.099 27 C -0.049 4.049 28 Cl -0.083 7.083 29 H 0.073 0.927 30 H 0.070 0.930 31 H 0.068 0.932 32 H 0.131 0.869 33 H 0.039 0.961 34 H 0.043 0.957 35 H 0.266 0.734 36 H 0.100 0.900 37 H 0.081 0.919 38 H 0.087 0.913 39 H 0.028 0.972 40 H 0.071 0.929 41 H 0.061 0.939 42 H 0.065 0.935 43 H 0.054 0.946 44 H 0.051 0.949 45 H 0.051 0.949 46 H 0.063 0.937 47 H 0.070 0.930 48 H 0.033 0.967 49 H 0.074 0.926 50 H 0.129 0.871 51 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.209 -2.205 10.437 10.669 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.071 4.071 3 C -0.135 4.135 4 C 0.098 3.902 5 N -0.296 5.296 6 C 0.121 3.879 7 C -0.578 4.578 8 H 0.079 0.921 9 C -0.135 4.135 10 N -0.527 5.527 11 Si 0.723 3.277 12 H -0.203 1.203 13 H -0.210 1.210 14 H -0.198 1.198 15 C 0.314 3.686 16 O -0.415 6.415 17 C -0.088 4.088 18 N -0.247 5.247 19 C -0.074 4.074 20 C -0.144 4.144 21 C -0.115 4.115 22 C -0.201 4.201 23 C -0.146 4.146 24 C -0.072 4.072 25 C -0.117 4.117 26 C -0.118 4.118 27 C -0.075 4.075 28 Cl -0.054 7.054 29 H 0.092 0.908 30 H 0.089 0.911 31 H 0.087 0.913 32 H 0.149 0.851 33 H 0.057 0.943 34 H 0.061 0.939 35 H 0.076 0.924 36 H 0.118 0.882 37 H 0.099 0.901 38 H 0.105 0.895 39 H 0.046 0.954 40 H 0.090 0.910 41 H 0.080 0.920 42 H 0.083 0.917 43 H 0.073 0.927 44 H 0.071 0.929 45 H 0.070 0.930 46 H 0.082 0.918 47 H 0.089 0.911 48 H 0.052 0.948 49 H 0.092 0.908 50 H 0.147 0.853 51 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -0.110 -2.674 11.186 11.502 hybrid contribution 1.195 0.032 -1.791 2.153 sum 1.085 -2.642 9.396 9.820 Atomic orbital electron populations 1.20820 0.90471 1.03062 1.02746 1.19485 0.96382 0.90924 1.00328 1.21032 0.93120 0.97464 1.01852 1.17591 0.90225 0.86311 0.96096 1.46014 1.47269 1.19035 1.17285 1.19577 0.98583 0.88867 0.80858 1.21414 1.13694 1.18756 1.03973 0.92069 1.24905 0.96387 0.94638 0.97601 1.69912 1.36714 1.21492 1.24561 0.86521 0.82118 0.78131 0.80926 1.20341 1.20960 1.19765 1.20439 0.78067 0.88811 0.81249 1.90631 1.60454 1.53723 1.36663 1.21932 0.98032 0.95662 0.93216 1.61593 1.19869 1.05822 1.37369 1.22156 0.90842 0.98158 0.96217 1.21592 0.98955 0.95758 0.98113 1.21211 0.96658 0.96094 0.97517 1.21798 1.00058 1.01217 0.97071 1.21616 0.96591 0.98655 0.97731 1.22082 0.98708 0.89595 0.96845 1.21178 1.00403 0.90876 0.99276 1.20811 0.91698 0.98608 1.00668 1.20647 0.92127 0.85985 1.08784 1.98316 1.77035 1.32935 1.97161 0.90789 0.91087 0.91272 0.85082 0.94264 0.93920 0.92380 0.88166 0.90134 0.89484 0.95395 0.91043 0.92032 0.91702 0.92652 0.92938 0.93003 0.91847 0.91109 0.94844 0.90785 0.85336 0.85184 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.39 9.61 36.00 0.35 -1.04 16 2 C -0.07 -1.08 5.88 -104.62 -0.62 -1.69 16 3 C -0.11 -1.99 9.33 -39.40 -0.37 -2.36 16 4 C 0.19 3.68 4.83 -83.68 -0.40 3.28 16 5 N -0.57 -11.60 2.51 -114.73 -0.29 -11.88 16 6 C 0.24 5.41 4.83 -5.19 -0.03 5.38 16 7 C -0.54 -13.49 9.24 -34.44 -0.32 -13.81 16 8 H 0.06 1.57 7.81 -52.49 -0.41 1.16 16 9 C 0.07 1.74 5.46 -17.82 -0.10 1.65 16 10 N -0.89 -23.59 13.29 55.43 0.74 -22.85 16 11 Si 0.90 20.09 29.54 -169.99 -5.02 15.06 16 12 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 13 H -0.28 -6.31 7.11 56.52 0.40 -5.91 16 14 H -0.27 -6.09 7.11 56.52 0.40 -5.68 16 15 C 0.53 10.53 7.08 -10.99 -0.08 10.45 16 16 O -0.54 -11.69 14.34 5.55 0.08 -11.61 16 17 C 0.04 0.74 3.88 -4.98 -0.02 0.72 16 18 N -0.52 -8.40 4.34 -236.11 -1.02 -9.42 16 19 C 0.05 0.85 5.12 -3.83 -0.02 0.83 16 20 C -0.11 -1.38 5.38 -26.65 -0.14 -1.53 16 21 C -0.10 -1.08 2.79 -90.50 -0.25 -1.33 16 22 C -0.14 -1.35 9.21 37.16 0.34 -1.01 16 23 C -0.11 -1.23 5.38 -26.65 -0.14 -1.37 16 24 C 0.06 0.74 5.46 -3.83 -0.02 0.72 16 25 C -0.10 -1.79 9.36 -39.40 -0.37 -2.16 16 26 C -0.10 -1.57 9.82 -39.57 -0.39 -1.96 16 27 C -0.05 -0.75 6.32 -39.48 -0.25 -1.00 16 28 Cl -0.08 -1.10 27.28 -51.86 -1.41 -2.51 16 29 H 0.07 0.84 8.14 -51.93 -0.42 0.42 16 30 H 0.07 0.80 6.89 -51.93 -0.36 0.44 16 31 H 0.07 0.76 8.08 -51.93 -0.42 0.34 16 32 H 0.13 2.12 8.06 -52.49 -0.42 1.70 16 33 H 0.04 0.94 7.85 -51.93 -0.41 0.53 16 34 H 0.04 0.97 6.56 -51.93 -0.34 0.63 16 35 H 0.27 6.76 8.31 -40.82 -0.34 6.42 16 36 H 0.10 1.64 7.71 -51.93 -0.40 1.24 16 37 H 0.08 1.54 7.59 -51.92 -0.39 1.14 16 38 H 0.09 1.58 6.10 -51.93 -0.32 1.26 16 39 H 0.03 0.44 8.14 -51.93 -0.42 0.02 16 40 H 0.07 0.99 8.14 -51.93 -0.42 0.57 16 41 H 0.06 0.73 8.14 -51.93 -0.42 0.31 16 42 H 0.06 0.74 8.14 -51.93 -0.42 0.32 16 43 H 0.05 0.52 8.14 -51.93 -0.42 0.09 16 44 H 0.05 0.46 8.14 -51.93 -0.42 0.04 16 45 H 0.05 0.43 8.14 -51.93 -0.42 0.01 16 46 H 0.06 0.61 8.14 -51.93 -0.42 0.19 16 47 H 0.07 0.84 8.14 -51.93 -0.42 0.42 16 48 H 0.03 0.45 8.14 -51.93 -0.42 0.03 16 49 H 0.07 0.92 8.00 -51.93 -0.42 0.50 16 50 H 0.13 2.39 8.06 -52.48 -0.42 1.97 16 51 H 0.13 1.77 8.06 -52.49 -0.42 1.34 16 LS Contribution 420.24 15.07 6.33 6.33 Total: -1.00 -27.52 420.24 -11.94 -39.46 By element: Atomic # 1 Polarization: 12.16 SS G_CDS: -8.52 Total: 3.64 kcal Atomic # 6 Polarization: -3.40 SS G_CDS: -2.82 Total: -6.22 kcal Atomic # 7 Polarization: -43.58 SS G_CDS: -0.58 Total: -44.15 kcal Atomic # 8 Polarization: -11.69 SS G_CDS: 0.08 Total: -11.61 kcal Atomic # 14 Polarization: 20.09 SS G_CDS: -5.02 Total: 15.06 kcal Atomic # 17 Polarization: -1.10 SS G_CDS: -1.41 Total: -2.51 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -27.52 -11.94 -39.46 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000028928015.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.715 kcal (2) G-P(sol) polarization free energy of solvation -27.524 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.809 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.463 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.748 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds