Wall clock time and date at job start Tue Mar 31 2020 05:28:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38137 * 119.97136 * 2 1 4 4 C 1.38844 * 119.94155 * 180.27562 * 3 2 1 5 5 N 1.39962 * 120.05855 * 179.74472 * 4 3 2 6 6 C 1.46505 * 120.00096 * 112.07097 * 5 4 3 7 7 C 1.50703 * 109.46966 * 270.00316 * 6 5 4 8 8 H 1.07995 * 119.99751 * 359.97438 * 7 6 5 9 9 C 1.37873 * 119.99776 * 180.02562 * 7 6 5 10 10 N 1.31510 * 120.00504 * 359.97438 * 9 7 6 11 11 Si 1.86806 * 119.99628 * 179.97438 * 9 7 6 12 12 H 1.48501 * 109.47349 * 59.99685 * 11 9 7 13 13 H 1.48502 * 109.47070 * 179.97438 * 11 9 7 14 14 H 1.48496 * 109.47288 * 299.99544 * 11 9 7 15 15 C 1.34779 * 120.00251 * 292.06967 * 5 4 3 16 16 O 1.21285 * 119.99471 * 4.96590 * 15 5 4 17 17 C 1.50702 * 120.00004 * 184.97133 * 15 5 4 18 18 N 1.46904 * 109.46850 * 173.47505 * 17 15 5 19 19 C 1.46844 * 111.00046 * 169.00278 * 18 17 15 20 20 C 1.53039 * 109.52412 * 185.83659 * 19 18 17 21 21 C 1.53123 * 109.27326 * 300.81542 * 20 19 18 22 22 C 1.53112 * 109.16223 * 57.65966 * 21 20 19 23 23 H 1.09000 * 109.53838 * 62.29590 * 22 21 20 24 24 C 1.52999 * 109.50648 * 182.40157 * 22 21 20 25 25 C 1.46854 * 110.99474 * 293.20610 * 18 17 15 26 26 C 1.38890 * 119.88296 * 359.46609 * 4 3 2 27 27 C 1.38087 * 119.94375 * 0.25706 * 26 4 3 28 28 C 1.38360 * 119.97166 * 179.71997 * 2 1 3 29 29 Cl 1.73598 * 119.94172 * 359.97438 * 28 2 1 30 30 H 1.09000 * 109.47197 * 270.28262 * 1 2 3 31 31 H 1.09002 * 109.46757 * 30.28070 * 1 2 3 32 32 H 1.08997 * 109.47218 * 150.27472 * 1 2 3 33 33 H 1.07996 * 120.02759 * 359.97438 * 3 2 1 34 34 H 1.09000 * 109.46924 * 29.99850 * 6 5 4 35 35 H 1.08996 * 109.47527 * 149.99928 * 6 5 4 36 36 H 0.96998 * 120.00782 * 180.02562 * 10 9 7 37 37 H 1.08999 * 109.46784 * 293.46306 * 17 15 5 38 38 H 1.08990 * 109.47675 * 53.46816 * 17 15 5 39 39 H 1.09001 * 109.45863 * 305.84907 * 19 18 17 40 40 H 1.08999 * 109.46462 * 65.81344 * 19 18 17 41 41 H 1.08993 * 109.50074 * 180.87739 * 20 19 18 42 42 H 1.08998 * 109.53335 * 60.77419 * 20 19 18 43 43 H 1.08993 * 109.52280 * 297.74501 * 21 20 19 44 44 H 1.09001 * 109.57096 * 177.58916 * 21 20 19 45 45 H 1.08994 * 109.47172 * 179.79766 * 24 22 21 46 46 H 1.08993 * 109.47022 * 299.80173 * 24 22 21 47 47 H 1.09001 * 109.46969 * 59.79638 * 24 22 21 48 48 H 1.09002 * 109.46317 * 294.17671 * 25 18 17 49 49 H 1.08999 * 109.45996 * 54.15013 * 25 18 17 50 50 H 1.08002 * 120.03056 * 180.23230 * 26 4 3 51 51 H 1.07999 * 119.97149 * 180.02562 * 27 26 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1971 1.1966 0.0000 4 6 3.5855 1.1959 -0.0058 5 7 4.2871 2.4070 -0.0112 6 6 5.0718 2.8042 1.1605 7 6 4.2037 3.6016 2.0996 8 1 3.1710 3.7935 1.8484 9 6 4.7282 4.0868 3.2787 10 7 5.9859 3.8534 3.5842 11 14 3.6523 5.0757 4.4423 12 1 2.5000 4.2460 4.8768 13 1 4.4476 5.4783 5.6301 14 1 3.1541 6.2887 3.7455 15 6 4.2410 3.2077 -1.0943 16 8 3.5211 2.9237 -2.0281 17 6 5.0841 4.4558 -1.1451 18 7 4.9765 5.0655 -2.4773 19 6 5.5669 6.4100 -2.4900 20 6 5.3086 7.0692 -3.8468 21 6 5.9273 6.2093 -4.9525 22 6 5.3310 4.8006 -4.8867 23 1 4.2572 4.8505 -5.0674 24 6 5.9874 3.9178 -5.9500 25 6 5.5886 4.2072 -3.4997 26 6 4.2769 -0.0086 -0.0003 27 6 3.5823 -1.2021 0.0054 28 6 2.1982 -1.1986 0.0059 29 17 1.3279 -2.7006 0.0139 30 1 -0.3633 0.0051 1.0276 31 1 -0.3633 0.8875 -0.5182 32 1 -0.3633 -0.8924 -0.5095 33 1 1.6571 2.1319 -0.0004 34 1 5.4376 1.9137 1.6717 35 1 5.9176 3.4134 0.8419 36 1 6.3548 4.1945 4.4140 37 1 4.7330 5.1623 -0.3930 38 1 6.1246 4.1999 -0.9456 39 1 5.1153 7.0123 -1.7018 40 1 6.6411 6.3366 -2.3205 41 1 5.7604 8.0610 -3.8613 42 1 4.2346 7.1559 -4.0113 43 1 7.0066 6.1550 -4.8107 44 1 5.7094 6.6520 -5.9244 45 1 5.5651 2.9142 -5.9003 46 1 5.8037 4.3409 -6.9375 47 1 7.0613 3.8694 -5.7696 48 1 6.6627 4.1441 -3.3255 49 1 5.1527 3.2096 -3.4448 50 1 5.3569 -0.0120 -0.0010 51 1 4.1194 -2.1390 0.0101 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000032855962.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:28:13 Heat of formation + Delta-G solvation = -25.102896 kcal Electronic energy + Delta-G solvation = -31374.836352 eV Core-core repulsion = 27299.209340 eV Total energy + Delta-G solvation = -4075.627013 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 364.166 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -40.17225 -39.10909 -38.00309 -36.28543 -35.06662 -34.06285 -32.84871 -32.28666 -31.82617 -29.93303 -27.51148 -26.99096 -26.66255 -26.47764 -23.48281 -23.08926 -22.34127 -21.62208 -21.00115 -19.55877 -18.58762 -16.85665 -16.76581 -16.40221 -15.87467 -15.56789 -15.42166 -15.21411 -14.54949 -14.38019 -14.16816 -14.08324 -13.88369 -13.74216 -13.55410 -12.96182 -12.79933 -12.60240 -12.52281 -12.48704 -12.24303 -12.22058 -12.07561 -11.86712 -11.65565 -11.62794 -11.32455 -11.22219 -11.15224 -11.03619 -10.95388 -10.82874 -10.58635 -10.55081 -10.29168 -10.24694 -10.18301 -9.91149 -9.17842 -8.65852 -8.61216 -8.46468 -8.01302 -7.72378 -6.27039 -4.34846 1.41596 1.59498 2.33462 3.20146 3.21417 3.25332 3.29869 3.51009 3.90478 4.20305 4.28891 4.79104 4.91812 4.92897 4.97986 5.02806 5.06816 5.15863 5.31350 5.44246 5.48378 5.55202 5.55745 5.60259 5.62109 5.68027 5.70714 5.76682 5.79234 5.82849 5.84445 5.87546 5.94952 6.01879 6.06370 6.14656 6.16181 6.21592 6.22846 6.33170 6.36677 6.50997 6.52907 6.68749 6.78042 6.94872 7.05467 7.20403 7.34862 7.55505 7.68459 7.92697 8.09310 8.68331 8.89378 9.33351 10.79835 Molecular weight = 364.17amu Principal moments of inertia in cm(-1) A = 0.006342 B = 0.003854 C = 0.002639 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 4413.622394 B = 7262.884888 C =10608.362965 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.069 4.069 3 C -0.091 4.091 4 C 0.188 3.812 5 N -0.567 5.567 6 C 0.239 3.761 7 C -0.540 4.540 8 H 0.062 0.938 9 C 0.068 3.932 10 N -0.890 5.890 11 Si 0.897 3.103 12 H -0.275 1.275 13 H -0.285 1.285 14 H -0.274 1.274 15 C 0.525 3.475 16 O -0.537 6.537 17 C 0.046 3.954 18 N -0.522 5.522 19 C 0.056 3.944 20 C -0.115 4.115 21 C -0.115 4.115 22 C -0.087 4.087 23 H 0.079 0.921 24 C -0.145 4.145 25 C 0.060 3.940 26 C -0.121 4.121 27 C -0.099 4.099 28 C -0.049 4.049 29 Cl -0.083 7.083 30 H 0.073 0.927 31 H 0.069 0.931 32 H 0.070 0.930 33 H 0.130 0.870 34 H 0.039 0.961 35 H 0.043 0.957 36 H 0.267 0.733 37 H 0.116 0.884 38 H 0.062 0.938 39 H 0.077 0.923 40 H 0.032 0.968 41 H 0.064 0.936 42 H 0.071 0.929 43 H 0.056 0.944 44 H 0.060 0.940 45 H 0.056 0.944 46 H 0.053 0.947 47 H 0.051 0.949 48 H 0.024 0.976 49 H 0.086 0.914 50 H 0.131 0.869 51 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.155 -2.244 -11.668 11.937 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.071 4.071 3 C -0.111 4.111 4 C 0.097 3.903 5 N -0.296 5.296 6 C 0.121 3.879 7 C -0.579 4.579 8 H 0.080 0.920 9 C -0.135 4.135 10 N -0.528 5.528 11 Si 0.724 3.276 12 H -0.200 1.200 13 H -0.211 1.211 14 H -0.200 1.200 15 C 0.314 3.686 16 O -0.414 6.414 17 C -0.084 4.084 18 N -0.247 5.247 19 C -0.072 4.072 20 C -0.153 4.153 21 C -0.153 4.153 22 C -0.106 4.106 23 H 0.097 0.903 24 C -0.203 4.203 25 C -0.068 4.068 26 C -0.140 4.140 27 C -0.118 4.118 28 C -0.076 4.076 29 Cl -0.055 7.055 30 H 0.092 0.908 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.148 0.852 34 H 0.057 0.943 35 H 0.061 0.939 36 H 0.077 0.923 37 H 0.134 0.866 38 H 0.080 0.920 39 H 0.095 0.905 40 H 0.050 0.950 41 H 0.083 0.917 42 H 0.089 0.911 43 H 0.075 0.925 44 H 0.078 0.922 45 H 0.075 0.925 46 H 0.072 0.928 47 H 0.070 0.930 48 H 0.042 0.958 49 H 0.105 0.895 50 H 0.149 0.851 51 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -1.923 -2.394 -12.112 12.495 hybrid contribution 0.449 0.378 1.298 1.425 sum -1.474 -2.016 -10.814 11.099 Atomic orbital electron populations 1.20826 0.90541 1.03112 1.02691 1.19557 0.96481 0.90984 1.00051 1.21097 0.93402 0.97290 0.99327 1.17600 0.90507 0.86032 0.96207 1.46022 1.48997 1.17221 1.17321 1.19587 0.90738 0.96646 0.80942 1.21389 0.97834 1.34424 1.04217 0.91987 1.24903 0.95068 0.95961 0.97581 1.69896 1.12923 1.45214 1.24799 0.86561 0.80408 0.80473 0.80135 1.20020 1.21071 1.19967 1.20428 0.82662 0.84060 0.81444 1.90631 1.40565 1.73208 1.37029 1.21926 0.98802 0.95816 0.91869 1.61530 1.57307 1.02178 1.03646 1.22089 0.97010 0.89957 0.98119 1.21563 1.01801 0.97820 0.94087 1.21652 0.99668 0.95484 0.98499 1.21121 1.01022 0.94304 0.94115 0.90257 1.21780 1.00385 0.99863 0.98236 1.22219 0.95814 0.97884 0.90872 1.21132 1.00315 0.90875 1.01719 1.20747 0.91693 0.98432 1.00940 1.20651 0.92146 0.85972 1.08800 1.98316 1.77077 1.32901 1.97158 0.90832 0.91198 0.91096 0.85206 0.94307 0.93940 0.92338 0.86597 0.92033 0.90504 0.95018 0.91741 0.91067 0.92491 0.92155 0.92522 0.92753 0.93033 0.95772 0.89541 0.85145 0.85101 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.52 9.61 36.00 0.35 -1.17 16 2 C -0.07 -1.12 5.88 -104.62 -0.62 -1.74 16 3 C -0.09 -1.70 9.01 -39.39 -0.36 -2.05 16 4 C 0.19 3.66 4.83 -83.68 -0.40 3.26 16 5 N -0.57 -11.60 2.51 -114.72 -0.29 -11.89 16 6 C 0.24 5.42 5.00 -5.19 -0.03 5.39 16 7 C -0.54 -13.54 9.39 -34.44 -0.32 -13.86 16 8 H 0.06 1.59 7.81 -52.49 -0.41 1.18 16 9 C 0.07 1.75 5.46 -17.82 -0.10 1.65 16 10 N -0.89 -23.69 13.29 55.43 0.74 -22.95 16 11 Si 0.90 20.10 29.54 -169.99 -5.02 15.08 16 12 H -0.27 -6.20 7.11 56.52 0.40 -5.80 16 13 H -0.29 -6.35 7.11 56.52 0.40 -5.95 16 14 H -0.27 -6.08 7.11 56.52 0.40 -5.67 16 15 C 0.53 10.53 7.08 -10.98 -0.08 10.45 16 16 O -0.54 -11.66 14.35 5.55 0.08 -11.58 16 17 C 0.05 0.82 4.07 -4.97 -0.02 0.80 16 18 N -0.52 -8.36 4.34 -236.11 -1.02 -9.39 16 19 C 0.06 0.75 5.46 -3.83 -0.02 0.73 16 20 C -0.11 -1.30 6.09 -26.65 -0.16 -1.46 16 21 C -0.12 -1.25 5.29 -26.61 -0.14 -1.39 16 22 C -0.09 -1.08 2.88 -90.54 -0.26 -1.35 16 23 H 0.08 1.10 8.14 -51.93 -0.42 0.68 16 24 C -0.14 -1.54 9.20 37.16 0.34 -1.19 16 25 C 0.06 0.89 4.40 -3.83 -0.02 0.88 16 26 C -0.12 -2.06 9.68 -39.40 -0.38 -2.44 16 27 C -0.10 -1.50 9.82 -39.57 -0.39 -1.89 16 28 C -0.05 -0.76 6.32 -39.47 -0.25 -1.01 16 29 Cl -0.08 -1.10 27.28 -51.86 -1.41 -2.51 16 30 H 0.07 0.91 8.14 -51.93 -0.42 0.48 16 31 H 0.07 0.87 8.09 -51.93 -0.42 0.45 16 32 H 0.07 0.85 6.90 -51.93 -0.36 0.50 16 33 H 0.13 2.48 8.06 -52.49 -0.42 2.06 16 34 H 0.04 0.93 7.85 -51.93 -0.41 0.53 16 35 H 0.04 0.97 6.26 -51.93 -0.33 0.64 16 36 H 0.27 6.81 8.31 -40.82 -0.34 6.47 16 37 H 0.12 2.15 7.97 -51.93 -0.41 1.74 16 38 H 0.06 1.06 7.20 -51.93 -0.37 0.69 16 39 H 0.08 1.02 8.00 -51.93 -0.42 0.60 16 40 H 0.03 0.41 8.14 -51.93 -0.42 -0.01 16 41 H 0.06 0.61 8.14 -51.93 -0.42 0.19 16 42 H 0.07 0.85 8.14 -51.93 -0.42 0.43 16 43 H 0.06 0.60 8.14 -51.93 -0.42 0.18 16 44 H 0.06 0.58 8.14 -51.93 -0.42 0.15 16 45 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 46 H 0.05 0.50 8.14 -51.93 -0.42 0.08 16 47 H 0.05 0.52 8.14 -51.93 -0.42 0.09 16 48 H 0.02 0.35 8.14 -51.93 -0.42 -0.07 16 49 H 0.09 1.49 6.10 -51.93 -0.32 1.18 16 50 H 0.13 2.06 8.06 -52.49 -0.42 1.64 16 51 H 0.13 1.64 8.06 -52.49 -0.42 1.22 16 LS Contribution 420.30 15.07 6.33 6.33 Total: -1.00 -27.49 420.30 -11.95 -39.43 By element: Atomic # 1 Polarization: 12.36 SS G_CDS: -8.50 Total: 3.87 kcal Atomic # 6 Polarization: -3.54 SS G_CDS: -2.85 Total: -6.39 kcal Atomic # 7 Polarization: -43.66 SS G_CDS: -0.58 Total: -44.23 kcal Atomic # 8 Polarization: -11.66 SS G_CDS: 0.08 Total: -11.58 kcal Atomic # 14 Polarization: 20.10 SS G_CDS: -5.02 Total: 15.08 kcal Atomic # 17 Polarization: -1.10 SS G_CDS: -1.41 Total: -2.51 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -27.49 -11.95 -39.43 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000032855962.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.329 kcal (2) G-P(sol) polarization free energy of solvation -27.486 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.157 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.945 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.432 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.103 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds