Wall clock time and date at job start Tue Mar 31 2020 04:59:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46900 * 110.99267 * 2 1 4 4 C 1.50705 * 109.47155 * 298.08199 * 3 2 1 5 5 O 1.21289 * 120.00176 * 0.02562 * 4 3 2 6 6 N 1.34781 * 119.99730 * 180.02562 * 4 3 2 7 7 C 1.37096 * 119.99475 * 180.02562 * 6 4 3 8 8 H 1.07996 * 120.00612 * 359.97438 * 7 6 4 9 9 C 1.38951 * 119.99836 * 179.97438 * 7 6 4 10 10 N 1.31405 * 120.00258 * 180.02562 * 9 7 6 11 11 Si 1.86802 * 119.99761 * 359.72570 * 9 7 6 12 12 H 1.48502 * 109.47382 * 90.00223 * 11 9 7 13 13 H 1.48506 * 109.47076 * 210.00175 * 11 9 7 14 14 H 1.48500 * 109.47211 * 329.99541 * 11 9 7 15 15 C 1.46895 * 111.00067 * 123.94976 * 2 1 3 16 16 C 1.50700 * 109.62669 * 297.92694 * 15 2 1 17 17 C 1.38237 * 120.00674 * 1.27392 * 16 15 2 18 18 C 1.38223 * 120.01400 * 179.76692 * 17 16 15 19 19 C 1.38264 * 120.02557 * 0.51428 * 18 17 16 20 20 C 1.38193 * 120.00949 * 359.74082 * 19 18 17 21 21 C 1.38324 * 120.00959 * 181.55511 * 16 15 2 22 22 Cl 1.73602 * 120.01009 * 359.95293 * 21 16 15 23 23 C 1.53227 * 109.62507 * 177.54443 * 15 2 1 24 24 C 1.52958 * 109.40727 * 294.91707 * 23 15 2 25 25 C 1.52962 * 109.81413 * 296.40068 * 24 23 15 26 26 C 1.53229 * 109.40210 * 63.59507 * 25 24 23 27 27 C 1.51267 * 109.62739 * 58.30805 * 15 2 1 28 28 O 1.20759 * 120.84985 * 248.34839 * 27 15 2 29 29 H 1.08996 * 109.47800 * 34.90337 * 1 2 3 30 30 H 1.09001 * 109.46680 * 154.90367 * 1 2 3 31 31 H 1.09001 * 109.47526 * 274.90024 * 1 2 3 32 32 H 1.09005 * 109.46757 * 178.08581 * 3 2 1 33 33 H 1.09001 * 109.47748 * 58.08556 * 3 2 1 34 34 H 0.96997 * 119.99967 * 0.02562 * 6 4 3 35 35 H 0.97007 * 120.00406 * 180.02562 * 10 9 7 36 36 H 1.08007 * 119.99105 * 0.02562 * 17 16 15 37 37 H 1.07995 * 119.98307 * 180.23057 * 18 17 16 38 38 H 1.07993 * 119.99409 * 179.76551 * 19 18 17 39 39 H 1.08002 * 119.99946 * 180.02562 * 20 19 18 40 40 H 1.09002 * 109.48129 * 54.89871 * 23 15 2 41 41 H 1.09005 * 109.48279 * 174.91788 * 23 15 2 42 42 H 1.08998 * 109.41455 * 56.50513 * 24 23 15 43 43 H 1.08997 * 109.41665 * 176.36911 * 24 23 15 44 44 H 1.09001 * 109.48285 * 183.57798 * 25 24 23 45 45 H 1.08999 * 109.48089 * 303.60616 * 25 24 23 46 46 H 1.09004 * 109.62661 * 65.09232 * 26 25 24 47 47 H 1.09007 * 109.62294 * 185.65536 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9953 1.3715 0.0000 4 6 1.5508 2.0801 -1.2536 5 8 0.8629 1.4999 -2.0668 6 7 1.9177 3.3587 -1.4711 7 6 1.5129 4.0034 -2.6112 8 1 0.9004 3.4868 -3.3353 9 6 1.8907 5.3217 -2.8352 10 7 1.5024 5.9399 -3.9278 11 14 2.9438 6.2177 -1.5792 12 1 4.3792 6.0128 -1.9002 13 1 2.6308 7.6690 -1.6158 14 1 2.6586 5.6840 -0.2231 15 6 1.9955 -0.7659 1.1376 16 6 1.5562 -0.1225 2.4276 17 6 0.7530 1.0023 2.4008 18 6 0.3461 1.5897 3.5840 19 6 0.7508 1.0590 4.7949 20 6 1.5581 -0.0623 4.8229 21 6 1.9614 -0.6538 3.6388 22 17 2.9751 -2.0627 3.6732 23 6 3.5260 -0.7969 1.0729 24 6 3.9666 -1.5707 -0.1707 25 6 3.5099 -3.0267 -0.0643 26 6 1.9787 -3.0795 -0.0424 27 6 1.4788 -2.1862 1.0766 28 8 0.6939 -2.5955 1.8980 29 1 -0.3634 0.8427 -0.5880 30 1 -0.3633 -0.9307 -0.4359 31 1 -0.3634 0.0878 1.0239 32 1 3.0844 1.3427 0.0343 33 1 1.6183 1.9054 0.8723 34 1 2.4682 3.8225 -0.8209 35 1 1.7664 6.8601 -4.0844 36 1 0.4400 1.4197 1.4551 37 1 -0.2844 2.4662 3.5625 38 1 0.4357 1.5206 5.7189 39 1 1.8738 -0.4769 5.7688 40 1 3.9084 0.2226 1.0213 41 1 3.9177 -1.2872 1.9642 42 1 3.5233 -1.1157 -1.0565 43 1 5.0531 -1.5380 -0.2518 44 1 3.8809 -3.5876 -0.9221 45 1 3.9021 -3.4645 0.8536 46 1 1.5865 -2.7254 -0.9958 47 1 1.6502 -4.1038 0.1339 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000071912088.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 04:59:54 Heat of formation + Delta-G solvation = 3.827023 kcal Electronic energy + Delta-G solvation = -32613.549575 eV Core-core repulsion = 28403.343963 eV Total energy + Delta-G solvation = -4210.205612 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 364.134 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -41.63446 -38.95617 -38.61331 -37.02634 -36.72324 -35.41448 -33.98770 -31.95616 -31.73664 -30.85172 -30.04613 -28.70861 -27.72935 -25.02323 -24.13150 -22.92458 -22.89851 -21.94598 -21.15044 -19.41230 -18.73679 -18.42473 -17.40709 -16.69083 -16.26145 -15.66328 -15.47144 -15.40341 -15.16085 -14.82650 -14.72699 -14.51557 -14.25773 -13.97654 -13.69054 -13.45060 -13.31583 -13.28534 -12.91712 -12.86846 -12.55019 -12.33073 -12.15662 -11.99771 -11.95509 -11.58577 -11.48038 -11.41054 -11.31504 -11.15588 -11.01702 -10.96543 -10.66754 -10.61993 -10.19503 -10.02373 -9.59728 -9.48435 -8.94887 -8.81103 -8.60547 -8.23177 -8.07477 -6.35764 -3.87405 0.95488 1.02191 1.90413 1.93628 2.98406 3.03229 3.11969 3.35549 3.65682 3.75261 3.96830 4.05938 4.29556 4.56277 4.60816 4.73754 4.75761 4.84256 4.93130 4.99717 5.08124 5.15672 5.16194 5.31181 5.36725 5.40745 5.43579 5.50213 5.60309 5.65404 5.72149 5.78436 5.79440 5.84671 5.89516 5.92315 6.00562 6.03588 6.09996 6.11989 6.21638 6.37566 6.42705 6.57053 6.97248 7.03681 7.49177 7.52519 8.08844 8.54164 8.89897 9.36960 9.76201 10.77102 Molecular weight = 364.13amu Principal moments of inertia in cm(-1) A = 0.012073 B = 0.003659 C = 0.003220 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2318.695906 B = 7650.122662 C = 8694.888350 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.006 4.006 2 N -0.483 5.483 3 C 0.012 3.988 4 C 0.452 3.548 5 O -0.557 6.557 6 N -0.588 5.588 7 C -0.305 4.305 8 H 0.121 0.879 9 C 0.044 3.956 10 N -0.879 5.879 11 Si 0.877 3.123 12 H -0.270 1.270 13 H -0.276 1.276 14 H -0.269 1.269 15 C 0.106 3.894 16 C -0.090 4.090 17 C -0.122 4.122 18 C -0.113 4.113 19 C -0.108 4.108 20 C -0.113 4.113 21 C -0.013 4.013 22 Cl -0.064 7.064 23 C -0.124 4.124 24 C -0.120 4.120 25 C -0.109 4.109 26 C -0.160 4.160 27 C 0.389 3.611 28 O -0.445 6.445 29 H 0.101 0.899 30 H 0.064 0.936 31 H 0.041 0.959 32 H 0.098 0.902 33 H 0.071 0.929 34 H 0.370 0.630 35 H 0.274 0.726 36 H 0.158 0.842 37 H 0.131 0.869 38 H 0.131 0.869 39 H 0.132 0.868 40 H 0.077 0.923 41 H 0.087 0.913 42 H 0.088 0.912 43 H 0.067 0.933 44 H 0.074 0.926 45 H 0.059 0.941 46 H 0.109 0.891 47 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.756 -13.146 17.289 22.233 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 N -0.207 5.207 3 C -0.119 4.119 4 C 0.237 3.763 5 O -0.439 6.439 6 N -0.227 5.227 7 C -0.434 4.434 8 H 0.138 0.862 9 C -0.160 4.160 10 N -0.519 5.519 11 Si 0.703 3.297 12 H -0.195 1.195 13 H -0.202 1.202 14 H -0.195 1.195 15 C 0.015 3.985 16 C -0.093 4.093 17 C -0.140 4.140 18 C -0.132 4.132 19 C -0.126 4.126 20 C -0.131 4.131 21 C -0.040 4.040 22 Cl -0.035 7.035 23 C -0.161 4.161 24 C -0.158 4.158 25 C -0.146 4.146 26 C -0.197 4.197 27 C 0.262 3.738 28 O -0.315 6.315 29 H 0.120 0.880 30 H 0.083 0.917 31 H 0.059 0.941 32 H 0.116 0.884 33 H 0.089 0.911 34 H 0.203 0.797 35 H 0.084 0.916 36 H 0.175 0.825 37 H 0.149 0.851 38 H 0.149 0.851 39 H 0.150 0.850 40 H 0.096 0.904 41 H 0.105 0.895 42 H 0.107 0.893 43 H 0.086 0.914 44 H 0.093 0.907 45 H 0.078 0.922 46 H 0.128 0.872 47 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 4.099 -13.934 16.594 22.053 hybrid contribution 0.692 1.295 1.641 2.202 sum 4.791 -12.639 18.235 22.698 Atomic orbital electron populations 1.23059 0.86339 1.05167 1.00731 1.61891 1.08905 1.12780 1.37167 1.22581 1.01911 0.89147 0.98234 1.19502 0.85714 0.82510 0.88525 1.90555 1.40706 1.65581 1.47085 1.42195 1.47886 1.11429 1.21210 1.19416 1.31053 0.95482 0.97410 0.86184 1.25024 0.97809 0.96400 0.96739 1.69615 1.44680 1.12585 1.25029 0.86718 0.81302 0.80471 0.81185 1.19535 1.20163 1.19496 1.20890 0.97508 0.93589 0.86543 1.20208 0.98390 0.96458 0.94209 1.21863 0.96832 0.94964 1.00298 1.21284 0.99635 1.00131 0.92100 1.21121 0.97410 0.95638 0.98422 1.21002 0.98862 0.96543 0.96736 1.20630 0.98095 0.90778 0.94516 1.98325 1.66736 1.40235 1.98170 1.22136 0.90771 1.02559 1.00683 1.21509 1.00692 0.94549 0.99012 1.21465 0.93271 0.97644 1.02232 1.22274 0.97889 0.99693 0.99874 1.24483 0.77235 0.88568 0.83498 1.90393 1.27041 1.76371 1.37689 0.88032 0.91749 0.94130 0.88414 0.91143 0.79730 0.91562 0.82541 0.85084 0.85109 0.85028 0.90417 0.89528 0.89315 0.91439 0.90727 0.92208 0.87247 0.89842 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.01 -0.10 7.35 60.07 0.44 0.34 16 2 N -0.48 -7.26 3.79 -230.83 -0.87 -8.14 16 3 C 0.01 0.18 4.63 -4.97 -0.02 0.16 16 4 C 0.45 9.51 7.24 -10.98 -0.08 9.43 16 5 O -0.56 -13.77 13.85 5.55 0.08 -13.69 16 6 N -0.59 -13.22 5.09 -10.96 -0.06 -13.27 16 7 C -0.30 -8.26 10.16 -14.93 -0.15 -8.41 16 8 H 0.12 3.73 7.39 -52.49 -0.39 3.34 16 9 C 0.04 1.15 5.50 -17.47 -0.10 1.06 16 10 N -0.88 -25.02 13.96 55.50 0.77 -24.24 16 11 Si 0.88 18.73 27.73 -169.99 -4.71 14.01 16 12 H -0.27 -5.67 7.11 56.52 0.40 -5.27 16 13 H -0.28 -5.96 7.11 56.52 0.40 -5.56 16 14 H -0.27 -5.21 6.53 56.52 0.37 -4.84 16 15 C 0.11 1.40 0.09 -133.51 -0.01 1.39 16 16 C -0.09 -1.20 3.82 -104.59 -0.40 -1.59 16 17 C -0.12 -1.58 5.82 -39.59 -0.23 -1.81 16 18 C -0.11 -1.25 10.05 -39.58 -0.40 -1.65 16 19 C -0.11 -1.07 10.05 -39.59 -0.40 -1.46 16 20 C -0.11 -1.21 9.83 -39.55 -0.39 -1.60 16 21 C -0.01 -0.16 5.58 -39.50 -0.22 -0.38 16 22 Cl -0.06 -0.74 23.15 -51.86 -1.20 -1.94 16 23 C -0.12 -1.43 4.25 -26.64 -0.11 -1.55 16 24 C -0.12 -1.28 5.74 -26.77 -0.15 -1.43 16 25 C -0.11 -1.05 5.94 -26.63 -0.16 -1.21 16 26 C -0.16 -1.81 6.17 -27.29 -0.17 -1.98 16 27 C 0.39 5.30 3.71 -28.28 -0.10 5.20 16 28 O -0.44 -7.06 15.61 6.00 0.09 -6.97 16 29 H 0.10 1.86 5.54 -51.93 -0.29 1.57 16 30 H 0.06 1.01 7.88 -51.93 -0.41 0.60 16 31 H 0.04 0.61 4.71 -51.93 -0.24 0.36 16 32 H 0.10 1.37 5.88 -51.93 -0.31 1.07 16 33 H 0.07 1.02 4.28 -51.93 -0.22 0.80 16 34 H 0.37 7.34 5.77 -40.82 -0.24 7.11 16 35 H 0.27 7.21 8.31 -40.82 -0.34 6.87 16 36 H 0.16 2.16 3.28 -52.48 -0.17 1.99 16 37 H 0.13 1.20 8.06 -52.49 -0.42 0.77 16 38 H 0.13 0.93 8.06 -52.49 -0.42 0.51 16 39 H 0.13 1.14 8.06 -52.49 -0.42 0.72 16 40 H 0.08 0.88 6.01 -51.93 -0.31 0.57 16 41 H 0.09 0.95 4.67 -51.93 -0.24 0.71 16 42 H 0.09 1.12 7.66 -51.93 -0.40 0.72 16 43 H 0.07 0.62 8.14 -51.93 -0.42 0.19 16 44 H 0.07 0.61 8.14 -51.93 -0.42 0.19 16 45 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 46 H 0.11 1.28 8.14 -51.93 -0.42 0.86 16 47 H 0.08 0.86 8.14 -51.93 -0.42 0.44 16 LS Contribution 366.09 15.07 5.52 5.52 Total: -1.00 -31.57 366.09 -8.80 -40.37 By element: Atomic # 1 Polarization: 19.61 SS G_CDS: -5.77 Total: 13.85 kcal Atomic # 6 Polarization: -2.85 SS G_CDS: -2.65 Total: -5.50 kcal Atomic # 7 Polarization: -45.50 SS G_CDS: -0.16 Total: -45.65 kcal Atomic # 8 Polarization: -20.83 SS G_CDS: 0.17 Total: -20.66 kcal Atomic # 14 Polarization: 18.73 SS G_CDS: -4.71 Total: 14.01 kcal Atomic # 17 Polarization: -0.74 SS G_CDS: -1.20 Total: -1.94 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -31.57 -8.80 -40.37 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000071912088.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.202 kcal (2) G-P(sol) polarization free energy of solvation -31.573 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.628 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.801 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.375 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.827 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds