Wall clock time and date at job start Tue Mar 31 2020 04:59:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 C 1.46903 * 111.00242 * 2 1 4 4 C 1.50696 * 109.47179 * 286.95334 * 3 2 1 5 5 O 1.21295 * 120.00100 * 359.97438 * 4 3 2 6 6 N 1.34782 * 119.99970 * 179.97438 * 4 3 2 7 7 C 1.37097 * 119.99767 * 179.97438 * 6 4 3 8 8 H 1.07997 * 120.00174 * 0.02562 * 7 6 4 9 9 C 1.38953 * 119.99906 * 180.02562 * 7 6 4 10 10 N 1.31411 * 119.99642 * 0.02562 * 9 7 6 11 11 Si 1.86794 * 120.00011 * 180.02562 * 9 7 6 12 12 H 1.48494 * 109.47304 * 60.00022 * 11 9 7 13 13 H 1.48509 * 109.47162 * 180.02562 * 11 9 7 14 14 H 1.48500 * 109.47190 * 299.99747 * 11 9 7 15 15 C 1.46896 * 111.00121 * 123.95756 * 2 1 3 16 16 C 1.50708 * 109.77930 * 294.93313 * 15 2 1 17 17 C 1.38234 * 120.00483 * 6.50166 * 16 15 2 18 18 C 1.38217 * 120.01319 * 179.74796 * 17 16 15 19 19 C 1.38260 * 120.02373 * 0.53944 * 18 17 16 20 20 C 1.38189 * 120.01799 * 359.71187 * 19 18 17 21 21 C 1.38329 * 120.00786 * 186.76729 * 16 15 2 22 22 Cl 1.73593 * 120.01326 * 0.02562 * 21 16 15 23 23 C 1.53223 * 109.62829 * 55.41413 * 15 2 1 24 24 C 1.52961 * 109.40443 * 65.08718 * 23 15 2 25 25 C 1.52958 * 109.81434 * 63.60298 * 24 23 15 26 26 C 1.53234 * 109.40347 * 296.39802 * 25 24 23 27 27 C 1.51267 * 108.53244 * 54.63192 * 26 25 24 28 28 O 1.20766 * 120.84904 * 128.63369 * 27 26 25 29 29 H 1.08994 * 109.46968 * 270.76607 * 1 2 3 30 30 H 1.09001 * 109.47074 * 30.76072 * 1 2 3 31 31 H 1.08996 * 109.47170 * 150.76104 * 1 2 3 32 32 H 1.09003 * 109.46775 * 46.95131 * 3 2 1 33 33 H 1.08998 * 109.47216 * 166.95297 * 3 2 1 34 34 H 0.96992 * 119.99840 * 0.02562 * 6 4 3 35 35 H 0.97008 * 119.99919 * 179.97438 * 10 9 7 36 36 H 1.08006 * 119.99396 * 359.97438 * 17 16 15 37 37 H 1.08004 * 119.98989 * 180.29349 * 18 17 16 38 38 H 1.08004 * 119.99526 * 179.72768 * 19 18 17 39 39 H 1.08001 * 120.01471 * 180.02562 * 20 19 18 40 40 H 1.09008 * 109.48154 * 305.10953 * 23 15 2 41 41 H 1.09005 * 109.49665 * 185.07580 * 23 15 2 42 42 H 1.09000 * 109.40944 * 183.70499 * 24 23 15 43 43 H 1.09000 * 109.41062 * 303.49175 * 24 23 15 44 44 H 1.08998 * 109.48770 * 56.38336 * 25 24 23 45 45 H 1.09000 * 109.48120 * 176.42481 * 25 24 23 46 46 H 1.08998 * 109.62605 * 294.91687 * 26 25 24 47 47 H 1.08996 * 109.62693 * 174.34449 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.7888 1.9889 -1.3590 5 8 1.2557 1.3492 -2.2411 6 7 2.1962 3.2519 -1.5944 7 6 2.0086 3.8134 -2.8310 8 1 1.5340 3.2439 -3.6163 9 6 2.4291 5.1153 -3.0739 10 7 3.0070 5.8081 -2.1184 11 14 2.1728 5.8806 -4.7585 12 1 0.7222 5.9074 -5.0746 13 1 2.7057 7.2668 -4.7587 14 1 2.8877 5.0760 -5.7816 15 6 1.9954 -0.7660 1.1375 16 6 1.6201 -0.0850 2.4285 17 6 0.7737 1.0078 2.4129 18 6 0.4251 1.6293 3.5972 19 6 0.9317 1.1654 4.7971 20 6 1.7821 0.0762 4.8135 21 6 2.1269 -0.5499 3.6287 22 17 3.1959 -1.9175 3.6483 23 6 1.4151 -2.1839 1.1159 24 6 1.9150 -2.9187 -0.1290 25 6 3.4350 -3.0759 -0.0630 26 6 4.0915 -1.6915 -0.0858 27 6 3.5015 -0.8612 1.0326 28 8 4.2146 -0.2892 1.8217 29 1 -0.3633 0.0137 1.0275 30 1 -0.3633 0.8831 -0.5256 31 1 -0.3633 -0.8967 -0.5019 32 1 1.4708 1.9620 0.7510 33 1 3.0603 1.3518 0.2320 34 1 2.6228 3.7632 -0.8892 35 1 3.3010 6.7169 -2.2881 36 1 0.3816 1.3738 1.4753 37 1 -0.2400 2.4802 3.5850 38 1 0.6626 1.6541 5.7218 39 1 2.1774 -0.2864 5.7509 40 1 0.3265 -2.1309 1.0942 41 1 1.7351 -2.7217 2.0085 42 1 1.4507 -3.9036 -0.1792 43 1 1.6480 -2.3478 -1.0183 44 1 3.7075 -3.5924 0.8574 45 1 3.7782 -3.6551 -0.9203 46 1 3.8948 -1.2088 -1.0431 47 1 5.1665 -1.7936 0.0620 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000071912089.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 04:59:58 Heat of formation + Delta-G solvation = -7.345143 kcal Electronic energy + Delta-G solvation = -32580.396095 eV Core-core repulsion = 28369.706022 eV Total energy + Delta-G solvation = -4210.690073 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 364.134 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -41.53076 -38.82916 -38.32872 -37.03631 -36.52850 -35.32964 -33.86470 -31.89998 -31.21978 -30.77746 -29.94824 -28.33690 -27.85610 -25.20335 -24.00433 -22.90029 -22.83216 -21.72584 -21.11028 -19.32471 -18.63929 -17.95116 -17.30538 -16.56553 -16.18108 -15.71469 -15.40941 -15.23969 -15.09555 -14.68148 -14.47977 -14.36396 -14.08741 -14.02128 -13.69610 -13.36092 -13.25379 -13.16158 -12.88604 -12.73368 -12.36982 -12.25732 -11.95727 -11.82227 -11.58164 -11.51276 -11.46196 -11.24135 -11.11075 -11.10345 -10.91408 -10.85512 -10.61411 -10.44718 -10.37882 -10.21210 -9.48888 -9.36488 -8.93688 -8.74428 -8.51849 -7.98162 -7.93583 -6.41199 -3.82407 1.03041 1.09516 2.02908 2.05468 3.19617 3.25823 3.29587 3.43584 3.80043 3.89327 4.05541 4.20478 4.34039 4.65619 4.73837 4.83505 4.87009 4.98880 5.03606 5.07924 5.15075 5.22987 5.24249 5.38994 5.41004 5.46596 5.51083 5.58362 5.68042 5.71170 5.79971 5.84090 5.84379 5.91569 5.99673 6.04758 6.08041 6.14794 6.17145 6.24804 6.26551 6.30233 6.45645 6.63956 7.04869 7.10326 7.54833 7.61223 8.05134 8.61094 9.17632 9.53957 10.05272 10.76307 Molecular weight = 364.13amu Principal moments of inertia in cm(-1) A = 0.012510 B = 0.003432 C = 0.003065 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2237.697763 B = 8156.540091 C = 9134.537354 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 N -0.484 5.484 3 C 0.019 3.981 4 C 0.445 3.555 5 O -0.574 6.574 6 N -0.563 5.563 7 C -0.299 4.299 8 H 0.103 0.897 9 C 0.023 3.977 10 N -0.901 5.901 11 Si 0.930 3.070 12 H -0.274 1.274 13 H -0.285 1.285 14 H -0.273 1.273 15 C 0.108 3.892 16 C -0.093 4.093 17 C -0.121 4.121 18 C -0.115 4.115 19 C -0.108 4.108 20 C -0.114 4.114 21 C -0.009 4.009 22 Cl -0.065 7.065 23 C -0.108 4.108 24 C -0.120 4.120 25 C -0.108 4.108 26 C -0.161 4.161 27 C 0.384 3.616 28 O -0.441 6.441 29 H 0.041 0.959 30 H 0.080 0.920 31 H 0.072 0.928 32 H 0.070 0.930 33 H 0.084 0.916 34 H 0.392 0.608 35 H 0.272 0.728 36 H 0.155 0.845 37 H 0.131 0.869 38 H 0.130 0.870 39 H 0.131 0.869 40 H 0.077 0.923 41 H 0.076 0.924 42 H 0.065 0.935 43 H 0.089 0.911 44 H 0.059 0.941 45 H 0.073 0.927 46 H 0.111 0.889 47 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.302 -14.871 13.500 20.354 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 N -0.208 5.208 3 C -0.111 4.111 4 C 0.229 3.771 5 O -0.458 6.458 6 N -0.200 5.200 7 C -0.429 4.429 8 H 0.121 0.879 9 C -0.179 4.179 10 N -0.542 5.542 11 Si 0.757 3.243 12 H -0.199 1.199 13 H -0.210 1.210 14 H -0.199 1.199 15 C 0.016 3.984 16 C -0.096 4.096 17 C -0.139 4.139 18 C -0.133 4.133 19 C -0.126 4.126 20 C -0.133 4.133 21 C -0.036 4.036 22 Cl -0.036 7.036 23 C -0.145 4.145 24 C -0.157 4.157 25 C -0.146 4.146 26 C -0.198 4.198 27 C 0.257 3.743 28 O -0.312 6.312 29 H 0.059 0.941 30 H 0.099 0.901 31 H 0.091 0.909 32 H 0.087 0.913 33 H 0.102 0.898 34 H 0.225 0.775 35 H 0.082 0.918 36 H 0.172 0.828 37 H 0.149 0.851 38 H 0.148 0.852 39 H 0.149 0.851 40 H 0.095 0.905 41 H 0.095 0.905 42 H 0.084 0.916 43 H 0.108 0.892 44 H 0.077 0.923 45 H 0.092 0.908 46 H 0.129 0.871 47 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -2.930 -15.149 12.879 20.098 hybrid contribution 0.078 1.215 0.433 1.292 sum -2.852 -13.934 13.312 19.480 Atomic orbital electron populations 1.22761 0.86224 1.04294 1.00019 1.61823 1.08904 1.12819 1.37228 1.22464 1.01221 0.89384 0.98065 1.19598 0.85350 0.83086 0.89018 1.90523 1.47339 1.61908 1.46042 1.41856 1.53047 1.11486 1.13624 1.19634 1.37086 0.96556 0.89610 0.87921 1.25259 0.96794 0.96456 0.99348 1.69613 1.40181 1.11464 1.32913 0.85930 0.78771 0.77832 0.81752 1.19922 1.21000 1.19891 1.20887 0.95282 0.95706 0.86522 1.20235 0.98149 0.96959 0.94250 1.21840 0.97388 0.94557 1.00071 1.21261 0.99934 0.99894 0.92176 1.21114 0.97001 0.95970 0.98499 1.21000 0.99017 0.96526 0.96748 1.20636 0.96006 0.92434 0.94524 1.98343 1.64132 1.42600 1.98555 1.21817 1.01240 0.91629 0.99845 1.21518 0.94890 1.00226 0.99099 1.21460 0.95780 0.95173 1.02165 1.22207 1.00716 0.96859 1.00067 1.24413 0.89488 0.77190 0.83238 1.90427 1.63517 1.38202 1.39026 0.94052 0.90136 0.90944 0.91299 0.89820 0.77534 0.91808 0.82789 0.85149 0.85173 0.85097 0.90464 0.90527 0.91610 0.89234 0.92251 0.90807 0.87112 0.89776 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.20 6.71 60.06 0.40 0.60 16 2 N -0.48 -7.56 3.58 -230.84 -0.83 -8.38 16 3 C 0.02 0.35 4.51 -4.98 -0.02 0.33 16 4 C 0.44 10.22 7.26 -10.98 -0.08 10.14 16 5 O -0.57 -14.75 14.90 5.54 0.08 -14.67 16 6 N -0.56 -14.17 5.29 -10.96 -0.06 -14.23 16 7 C -0.30 -8.23 9.68 -14.93 -0.14 -8.37 16 8 H 0.10 2.94 7.16 -52.49 -0.38 2.56 16 9 C 0.02 0.62 5.50 -17.47 -0.10 0.52 16 10 N -0.90 -24.51 13.05 55.50 0.72 -23.79 16 11 Si 0.93 20.91 29.55 -169.99 -5.02 15.89 16 12 H -0.27 -6.09 7.11 56.52 0.40 -5.68 16 13 H -0.28 -6.27 7.11 56.52 0.40 -5.87 16 14 H -0.27 -6.12 7.11 56.52 0.40 -5.72 16 15 C 0.11 1.49 0.08 -133.51 -0.01 1.48 16 16 C -0.09 -1.29 3.91 -104.59 -0.41 -1.70 16 17 C -0.12 -1.60 6.07 -39.59 -0.24 -1.84 16 18 C -0.11 -1.30 10.05 -39.58 -0.40 -1.70 16 19 C -0.11 -1.12 10.04 -39.59 -0.40 -1.52 16 20 C -0.11 -1.30 9.83 -39.55 -0.39 -1.69 16 21 C -0.01 -0.12 5.49 -39.50 -0.22 -0.33 16 22 Cl -0.07 -0.83 22.78 -51.86 -1.18 -2.01 16 23 C -0.11 -1.23 4.30 -26.64 -0.11 -1.35 16 24 C -0.12 -1.27 5.74 -26.77 -0.15 -1.43 16 25 C -0.11 -1.12 5.94 -26.63 -0.16 -1.28 16 26 C -0.16 -2.09 6.16 -27.48 -0.17 -2.25 16 27 C 0.38 5.75 3.07 -28.48 -0.09 5.66 16 28 O -0.44 -7.65 14.42 5.99 0.09 -7.56 16 29 H 0.04 0.51 4.85 -51.93 -0.25 0.26 16 30 H 0.08 1.33 6.66 -51.93 -0.35 0.98 16 31 H 0.07 0.96 7.69 -51.93 -0.40 0.56 16 32 H 0.07 1.16 4.54 -51.93 -0.24 0.93 16 33 H 0.08 1.58 6.57 -51.93 -0.34 1.24 16 34 H 0.39 9.64 7.90 -40.82 -0.32 9.32 16 35 H 0.27 7.04 8.31 -40.82 -0.34 6.70 16 36 H 0.16 2.11 3.16 -52.48 -0.17 1.95 16 37 H 0.13 1.21 8.06 -52.48 -0.42 0.79 16 38 H 0.13 0.99 8.06 -52.48 -0.42 0.57 16 39 H 0.13 1.23 8.06 -52.49 -0.42 0.81 16 40 H 0.08 0.83 6.60 -51.92 -0.34 0.49 16 41 H 0.08 0.85 5.64 -51.93 -0.29 0.56 16 42 H 0.07 0.57 8.14 -51.93 -0.42 0.15 16 43 H 0.09 1.11 7.66 -51.93 -0.40 0.72 16 44 H 0.06 0.58 8.14 -51.93 -0.42 0.16 16 45 H 0.07 0.66 8.14 -51.93 -0.42 0.24 16 46 H 0.11 1.57 8.14 -51.93 -0.42 1.15 16 47 H 0.08 1.03 8.14 -51.93 -0.42 0.60 16 LS Contribution 370.86 15.07 5.59 5.59 Total: -1.00 -31.18 370.86 -9.28 -40.46 By element: Atomic # 1 Polarization: 19.43 SS G_CDS: -5.99 Total: 13.44 kcal Atomic # 6 Polarization: -2.04 SS G_CDS: -2.68 Total: -4.72 kcal Atomic # 7 Polarization: -46.24 SS G_CDS: -0.16 Total: -46.40 kcal Atomic # 8 Polarization: -22.41 SS G_CDS: 0.17 Total: -22.24 kcal Atomic # 14 Polarization: 20.91 SS G_CDS: -5.02 Total: 15.89 kcal Atomic # 17 Polarization: -0.83 SS G_CDS: -1.18 Total: -2.01 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -31.18 -9.28 -40.46 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000071912089.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.113 kcal (2) G-P(sol) polarization free energy of solvation -31.178 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.935 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.280 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.458 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.345 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds