Wall clock time and date at job start Tue Mar 31 2020 07:02:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46900 * 110.99881 * 2 1 4 4 C 1.46900 * 110.99754 * 123.94956 * 2 1 3 5 5 C 1.53004 * 109.47223 * 74.58844 * 4 2 1 6 6 H 1.08998 * 109.46592 * 304.98350 * 5 4 2 7 7 N 1.46505 * 109.47152 * 184.98931 * 5 4 2 8 8 C 1.34770 * 120.00163 * 87.17438 * 7 5 4 9 9 O 1.21592 * 120.00222 * 4.21089 * 8 7 5 10 10 N 1.34778 * 119.99867 * 184.20548 * 8 7 5 11 11 C 1.46497 * 119.99878 * 179.97438 * 10 8 7 12 12 C 1.52996 * 109.47151 * 185.08153 * 11 10 8 13 13 C 1.50694 * 115.54954 * 65.37585 * 12 11 10 14 14 H 1.08004 * 119.99696 * 271.48574 * 13 12 11 15 15 C 1.37876 * 120.00574 * 91.49018 * 13 12 11 16 16 N 1.31517 * 119.99261 * 3.97416 * 15 13 12 17 17 Si 1.86798 * 120.00336 * 183.97683 * 15 13 12 18 18 H 1.48498 * 109.47315 * 90.00066 * 17 15 13 19 19 H 1.48508 * 109.46860 * 209.99918 * 17 15 13 20 20 H 1.48501 * 109.47151 * 329.99499 * 17 15 13 21 21 C 1.53003 * 117.49710 * 279.70377 * 12 11 10 22 22 C 1.53004 * 117.49783 * 211.04404 * 12 11 10 23 23 C 1.50697 * 109.47442 * 64.98458 * 5 4 2 24 24 C 1.38240 * 119.98761 * 260.00329 * 23 5 4 25 25 C 1.38208 * 120.01436 * 179.97438 * 24 23 5 26 26 C 1.38352 * 119.98652 * 0.02562 * 25 24 23 27 27 Cl 1.73604 * 120.01482 * 180.02562 * 26 25 24 28 28 C 1.38345 * 119.97572 * 0.27681 * 26 25 24 29 29 C 1.38227 * 119.98406 * 359.39861 * 28 26 25 30 30 H 1.09001 * 109.46947 * 290.73813 * 1 2 3 31 31 H 1.08997 * 109.47249 * 50.73765 * 1 2 3 32 32 H 1.09001 * 109.47087 * 170.74246 * 1 2 3 33 33 H 1.09007 * 109.47164 * 183.95641 * 3 2 1 34 34 H 1.09006 * 109.46951 * 303.94883 * 3 2 1 35 35 H 1.08991 * 109.47558 * 63.95029 * 3 2 1 36 36 H 1.08996 * 109.47486 * 314.57993 * 4 2 1 37 37 H 1.09002 * 109.46934 * 194.58107 * 4 2 1 38 38 H 0.97000 * 119.99292 * 267.17979 * 7 5 4 39 39 H 0.96991 * 120.00138 * 0.02562 * 10 8 7 40 40 H 1.08999 * 109.47537 * 305.08457 * 11 10 8 41 41 H 1.09007 * 109.46965 * 65.08086 * 11 10 8 42 42 H 0.97002 * 119.99742 * 185.00878 * 16 15 13 43 43 H 1.08997 * 117.50222 * 359.97438 * 21 12 11 44 44 H 1.09007 * 117.49830 * 145.02393 * 21 12 11 45 45 H 1.08998 * 117.49872 * 214.97669 * 22 12 11 46 46 H 1.09001 * 117.50282 * 359.97438 * 22 12 11 47 47 H 1.08009 * 119.99270 * 0.02562 * 24 23 5 48 48 H 1.08000 * 120.00866 * 180.02562 * 25 24 23 49 49 H 1.08004 * 120.01294 * 179.72750 * 28 26 25 50 50 H 1.07992 * 119.99160 * 180.32102 * 29 28 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.9954 -0.7659 1.1377 5 6 1.8203 -2.2621 0.8700 6 1 0.7731 -2.4720 0.6522 7 7 2.2349 -3.0216 2.0522 8 6 1.3506 -3.2688 3.0387 9 8 0.1898 -2.9287 2.9140 10 7 1.7527 -3.8931 4.1634 11 6 0.7916 -4.1613 5.2359 12 6 1.5237 -4.7583 6.4394 13 6 2.5105 -3.8441 7.1188 14 1 3.5357 -3.8093 6.7806 15 6 2.1048 -3.0523 8.1720 16 7 0.8777 -3.1515 8.6346 17 14 3.2980 -1.8386 8.9419 18 1 3.1945 -0.5321 8.2438 19 1 2.9648 -1.6603 10.3781 20 1 4.6832 -2.3588 8.8161 21 6 1.8587 -6.2505 6.3935 22 6 0.7507 -5.7425 7.3196 23 6 2.6689 -2.6644 -0.3086 24 6 2.0932 -2.8096 -1.5570 25 6 2.8710 -3.1779 -2.6384 26 6 4.2260 -3.4019 -2.4712 27 17 5.2039 -3.8640 -3.8292 28 6 4.8005 -3.2625 -1.2204 29 6 4.0228 -2.8875 -0.1409 30 1 -0.3633 0.3639 0.9611 31 1 -0.3633 0.6504 -0.7956 32 1 -0.3633 -1.0143 -0.1653 33 1 3.0828 1.3433 -0.0709 34 1 1.5898 1.9163 -0.8525 35 1 1.7044 1.8724 0.9232 36 1 1.4522 -0.4925 2.0422 37 1 3.0541 -0.5417 1.2679 38 1 3.1460 -3.3464 2.1249 39 1 2.6787 -4.1641 4.2630 40 1 0.3068 -3.2306 5.5306 41 1 0.0394 -4.8664 4.8818 42 1 0.5696 -2.5451 9.3261 43 1 1.5571 -6.8069 5.5061 44 1 2.7927 -6.5711 6.8551 45 1 0.9563 -5.7291 8.3899 46 1 -0.2796 -5.9644 7.0415 47 1 1.0354 -2.6343 -1.6875 48 1 2.4213 -3.2909 -3.6138 49 1 5.8574 -3.4415 -1.0883 50 1 4.4721 -2.7737 0.8345 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000252497153.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:02:36 Heat of formation + Delta-G solvation = 19.725321 kcal Electronic energy + Delta-G solvation = -30681.988243 eV Core-core repulsion = 26542.879217 eV Total energy + Delta-G solvation = -4139.109026 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 365.161 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -40.32805 -39.11361 -37.66119 -36.73552 -36.63200 -34.68138 -33.34276 -31.95025 -31.37867 -31.01810 -28.59789 -27.69081 -26.29891 -25.23864 -24.18502 -23.14076 -22.20293 -21.21681 -20.71463 -20.08024 -19.39537 -18.17559 -17.29130 -16.53197 -16.05614 -15.68004 -15.53173 -15.22298 -15.13926 -14.80211 -14.61090 -14.45246 -14.13580 -13.90445 -13.71361 -13.69275 -13.21646 -13.13543 -12.93235 -12.69674 -12.48873 -12.14933 -11.87172 -11.81341 -11.77705 -11.73062 -11.54798 -11.40809 -11.08288 -11.03131 -10.91544 -10.88112 -10.56205 -10.22772 -9.80267 -9.48476 -9.24403 -9.11709 -9.05028 -8.78620 -8.47073 -8.44256 -8.26722 -8.05629 -6.09376 -4.18434 0.91708 1.09843 1.90965 2.99138 3.23964 3.31861 3.32547 3.42712 3.69593 3.93403 4.33599 4.45517 4.54137 4.65903 4.75137 4.95563 5.01982 5.06497 5.16328 5.17866 5.21921 5.29854 5.38068 5.42285 5.45969 5.55192 5.64011 5.69440 5.72802 5.80698 5.87263 5.99061 6.00844 6.03183 6.29934 6.34648 6.45732 6.53509 6.56312 6.61635 6.70198 6.78697 6.85836 6.89850 7.13372 7.24896 7.40196 7.42190 7.61837 7.78611 8.32576 8.56099 8.82668 9.10647 9.48355 10.97926 Molecular weight = 365.16amu Principal moments of inertia in cm(-1) A = 0.010287 B = 0.002356 C = 0.002186 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2721.231855 B =11881.742180 C =12804.640143 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 N -0.540 5.540 3 C 0.026 3.974 4 C 0.046 3.954 5 C 0.209 3.791 6 H 0.101 0.899 7 N -0.749 5.749 8 C 0.700 3.300 9 O -0.601 6.601 10 N -0.719 5.719 11 C 0.182 3.818 12 C 0.020 3.980 13 C -0.495 4.495 14 H 0.058 0.942 15 C 0.073 3.927 16 N -0.875 5.875 17 Si 0.889 3.111 18 H -0.281 1.281 19 H -0.287 1.287 20 H -0.274 1.274 21 C -0.213 4.213 22 C -0.135 4.135 23 C -0.061 4.061 24 C -0.076 4.076 25 C -0.109 4.109 26 C -0.038 4.038 27 Cl -0.079 7.079 28 C -0.108 4.108 29 C -0.105 4.105 30 H 0.030 0.970 31 H 0.065 0.935 32 H 0.070 0.930 33 H 0.066 0.934 34 H 0.067 0.933 35 H 0.025 0.975 36 H 0.052 0.948 37 H 0.074 0.926 38 H 0.394 0.606 39 H 0.396 0.604 40 H 0.066 0.934 41 H 0.035 0.965 42 H 0.261 0.739 43 H 0.063 0.937 44 H 0.077 0.923 45 H 0.091 0.909 46 H 0.062 0.938 47 H 0.132 0.868 48 H 0.131 0.869 49 H 0.131 0.869 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.325 2.952 -21.913 22.743 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 N -0.264 5.264 3 C -0.122 4.122 4 C -0.084 4.084 5 C 0.103 3.897 6 H 0.118 0.882 7 N -0.406 5.406 8 C 0.400 3.600 9 O -0.480 6.480 10 N -0.371 5.371 11 C 0.059 3.941 12 C 0.019 3.981 13 C -0.533 4.533 14 H 0.077 0.923 15 C -0.131 4.131 16 N -0.511 5.511 17 Si 0.716 3.284 18 H -0.207 1.207 19 H -0.212 1.212 20 H -0.199 1.199 21 C -0.251 4.251 22 C -0.173 4.173 23 C -0.062 4.062 24 C -0.095 4.095 25 C -0.128 4.128 26 C -0.064 4.064 27 Cl -0.050 7.050 28 C -0.127 4.127 29 C -0.123 4.123 30 H 0.049 0.951 31 H 0.084 0.916 32 H 0.089 0.911 33 H 0.085 0.915 34 H 0.086 0.914 35 H 0.044 0.956 36 H 0.070 0.930 37 H 0.093 0.907 38 H 0.229 0.771 39 H 0.229 0.771 40 H 0.084 0.916 41 H 0.053 0.947 42 H 0.071 0.929 43 H 0.082 0.918 44 H 0.096 0.904 45 H 0.109 0.891 46 H 0.081 0.919 47 H 0.150 0.850 48 H 0.149 0.851 49 H 0.149 0.851 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 4.354 3.021 -22.316 22.937 hybrid contribution 1.287 0.913 1.240 2.007 sum 5.642 3.935 -21.076 22.170 Atomic orbital electron populations 1.22464 0.87112 1.02588 1.00558 1.61912 1.08144 1.13631 1.42705 1.22366 1.00600 0.88763 1.00464 1.22579 1.00614 0.92999 0.92202 1.19447 0.98974 0.89708 0.81585 0.88152 1.45178 1.14246 1.60818 1.20362 1.16016 0.84695 0.78965 0.80297 1.90873 1.16952 1.59109 1.81040 1.45145 1.13993 1.61760 1.16175 1.20896 0.89025 0.99673 0.84549 1.19065 0.98305 0.86886 0.93829 1.20329 0.95017 1.23276 1.14683 0.92345 1.24977 0.95365 0.96985 0.95787 1.70007 1.16518 1.36230 1.28380 0.86654 0.81441 0.81708 0.78570 1.20701 1.21234 1.19868 1.23061 1.00237 1.00340 1.01442 1.22441 0.93382 1.03852 0.97662 1.19883 0.93825 0.97572 0.94872 1.20866 1.00164 0.97295 0.91177 1.21003 0.91667 1.00233 0.99862 1.20910 0.92167 1.04477 0.88880 1.98366 1.70883 1.90922 1.44841 1.20967 1.00509 1.00364 0.90851 1.20888 0.93213 0.99566 0.98649 0.95097 0.91593 0.91116 0.91495 0.91398 0.95612 0.93008 0.90711 0.77141 0.77111 0.91577 0.94713 0.92916 0.91801 0.90443 0.89096 0.91902 0.85027 0.85081 0.85061 0.85315 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.21 9.40 60.07 0.56 0.78 16 2 N -0.54 -5.61 4.67 -251.26 -1.17 -6.79 16 3 C 0.03 0.24 9.51 60.06 0.57 0.81 16 4 C 0.05 0.54 4.68 -3.82 -0.02 0.52 16 5 C 0.21 2.50 2.35 -69.08 -0.16 2.34 16 6 H 0.10 1.38 5.99 -51.93 -0.31 1.07 16 7 N -0.75 -9.89 5.02 -59.81 -0.30 -10.19 16 8 C 0.70 12.56 8.55 -86.92 -0.74 11.82 16 9 O -0.60 -12.96 15.94 5.28 0.08 -12.87 16 10 N -0.72 -13.30 5.47 -65.23 -0.36 -13.66 16 11 C 0.18 4.01 5.50 -4.05 -0.02 3.99 16 12 C 0.02 0.46 1.56 -155.66 -0.24 0.22 16 13 C -0.50 -12.55 8.76 -34.44 -0.30 -12.85 16 14 H 0.06 1.45 7.82 -52.48 -0.41 1.04 16 15 C 0.07 1.91 5.41 -17.82 -0.10 1.81 16 16 N -0.88 -24.03 12.12 55.43 0.67 -23.35 16 17 Si 0.89 20.39 29.54 -169.99 -5.02 15.37 16 18 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 19 H -0.29 -6.62 7.11 56.52 0.40 -6.22 16 20 H -0.27 -6.16 7.11 56.52 0.40 -5.76 16 21 C -0.21 -4.37 9.96 -26.69 -0.27 -4.64 16 22 C -0.14 -3.08 8.90 -26.69 -0.24 -3.32 16 23 C -0.06 -0.61 4.68 -104.62 -0.49 -1.10 16 24 C -0.08 -0.72 9.67 -39.59 -0.38 -1.11 16 25 C -0.11 -0.98 9.83 -39.55 -0.39 -1.37 16 26 C -0.04 -0.35 6.32 -39.50 -0.25 -0.60 16 27 Cl -0.08 -0.71 28.96 -51.86 -1.50 -2.21 16 28 C -0.11 -0.97 9.83 -39.55 -0.39 -1.36 16 29 C -0.10 -0.96 9.08 -39.58 -0.36 -1.32 16 30 H 0.03 0.36 7.98 -51.93 -0.41 -0.06 16 31 H 0.07 0.55 8.03 -51.93 -0.42 0.14 16 32 H 0.07 0.73 6.93 -51.93 -0.36 0.37 16 33 H 0.07 0.57 8.07 -51.93 -0.42 0.15 16 34 H 0.07 0.53 8.06 -51.93 -0.42 0.11 16 35 H 0.03 0.24 8.14 -51.93 -0.42 -0.18 16 36 H 0.05 0.76 7.91 -51.93 -0.41 0.35 16 37 H 0.07 0.82 7.91 -51.93 -0.41 0.41 16 38 H 0.39 4.24 6.89 -40.82 -0.28 3.95 16 39 H 0.40 6.58 8.48 -40.82 -0.35 6.23 16 40 H 0.07 1.67 8.14 -51.93 -0.42 1.25 16 41 H 0.03 0.76 8.09 -51.92 -0.42 0.34 16 42 H 0.26 6.91 8.32 -40.82 -0.34 6.57 16 43 H 0.06 1.19 8.14 -51.93 -0.42 0.77 16 44 H 0.08 1.57 8.14 -51.93 -0.42 1.15 16 45 H 0.09 2.25 7.80 -51.93 -0.41 1.84 16 46 H 0.06 1.36 8.14 -51.93 -0.42 0.94 16 47 H 0.13 1.12 8.04 -52.48 -0.42 0.70 16 48 H 0.13 0.97 8.06 -52.49 -0.42 0.55 16 49 H 0.13 0.98 8.06 -52.48 -0.42 0.56 16 50 H 0.13 1.00 6.89 -52.49 -0.36 0.64 16 LS Contribution 427.05 15.07 6.44 6.44 Total: -1.00 -29.54 427.05 -12.28 -41.82 By element: Atomic # 1 Polarization: 18.73 SS G_CDS: -7.90 Total: 10.83 kcal Atomic # 6 Polarization: -2.17 SS G_CDS: -3.21 Total: -5.39 kcal Atomic # 7 Polarization: -52.83 SS G_CDS: -1.16 Total: -53.99 kcal Atomic # 8 Polarization: -12.96 SS G_CDS: 0.08 Total: -12.87 kcal Atomic # 14 Polarization: 20.39 SS G_CDS: -5.02 Total: 15.37 kcal Atomic # 17 Polarization: -0.71 SS G_CDS: -1.50 Total: -2.21 kcal Total LS contribution 6.44 Total: 6.44 kcal Total: -29.54 -12.28 -41.82 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000252497153.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.545 kcal (2) G-P(sol) polarization free energy of solvation -29.543 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.003 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.278 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.820 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.725 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds