Wall clock time and date at job start Tue Mar 31 2020 06:14:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35804 * 116.99958 * 2 1 4 4 C 1.38610 * 120.12408 * 359.97438 * 3 2 1 5 5 C 1.38158 * 120.06754 * 180.02562 * 4 3 2 6 6 C 1.38421 * 120.32054 * 0.02562 * 5 4 3 7 7 C 1.37956 * 120.25665 * 359.69825 * 6 5 4 8 8 C 1.39403 * 119.92316 * 0.57204 * 7 6 5 9 9 C 1.48172 * 120.15764 * 179.72571 * 8 7 6 10 10 C 1.39874 * 119.29767 * 359.70181 * 9 8 7 11 11 C 1.39038 * 119.26728 * 179.97438 * 10 9 8 12 12 C 1.47766 * 121.03148 * 180.02562 * 11 10 9 13 13 O 1.21459 * 120.00146 * 218.18498 * 12 11 10 14 14 O 1.34724 * 119.99741 * 38.17612 * 12 11 10 15 15 C 1.41486 * 117.93848 * 0.05295 * 11 10 9 16 16 C 1.41052 * 133.73401 * 179.97438 * 15 11 10 17 17 C 1.50702 * 125.69347 * 359.97438 * 16 15 11 18 18 N 1.30274 * 108.61217 * 179.97438 * 16 15 11 19 19 N 1.39988 * 109.74962 * 0.02562 * 18 16 15 20 20 C 1.46499 * 125.91944 * 179.97438 * 19 18 16 21 21 C 1.50699 * 109.47041 * 90.02183 * 20 19 18 22 22 H 1.07997 * 120.00010 * 0.02562 * 21 20 19 23 23 C 1.37876 * 120.00255 * 179.97438 * 21 20 19 24 24 N 1.31518 * 119.99471 * 0.02562 * 23 21 20 25 25 Si 1.86801 * 120.00276 * 180.02562 * 23 21 20 26 26 H 1.48494 * 109.46718 * 90.00330 * 25 23 21 27 27 H 1.48504 * 109.47225 * 210.00167 * 25 23 21 28 28 H 1.48503 * 109.47008 * 330.00314 * 25 23 21 29 29 C 1.37126 * 108.16572 * 359.97438 * 19 18 16 30 30 N 1.32290 * 119.29265 * 179.72625 * 9 8 7 31 31 H 1.09005 * 109.46932 * 180.02562 * 1 2 3 32 32 H 1.09003 * 109.47183 * 299.99637 * 1 2 3 33 33 H 1.08994 * 109.47474 * 59.99980 * 1 2 3 34 34 H 1.08003 * 119.96384 * 0.02562 * 4 3 2 35 35 H 1.08000 * 119.83864 * 179.97438 * 5 4 3 36 36 H 1.08006 * 119.87553 * 179.97438 * 6 5 4 37 37 H 1.07993 * 120.04156 * 180.27880 * 7 6 5 38 38 H 1.08001 * 120.36304 * 359.97438 * 10 9 8 39 39 H 0.96700 * 116.99995 * 179.97438 * 14 12 11 40 40 H 1.08992 * 109.47236 * 275.99028 * 17 16 15 41 41 H 1.09004 * 109.47010 * 35.99131 * 17 16 15 42 42 H 1.08999 * 109.46842 * 155.99034 * 17 16 15 43 43 H 1.08999 * 109.47406 * 210.02421 * 20 19 18 44 44 H 1.09000 * 109.46837 * 330.02386 * 20 19 18 45 45 H 0.97001 * 119.99267 * 179.97438 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0455 1.2100 0.0000 4 6 1.2931 2.3741 -0.0005 5 6 1.9216 3.6045 -0.0011 6 6 3.3035 3.6833 -0.0016 7 6 4.0654 2.5332 0.0047 8 6 3.4422 1.2863 -0.0005 9 6 4.2554 0.0477 0.0001 10 6 5.6508 0.1450 -0.0005 11 6 6.4133 -1.0176 0.0005 12 6 7.8898 -0.9602 0.0005 13 8 8.5288 -1.7634 -0.6490 14 8 8.5273 -0.0169 0.7208 15 6 5.7316 -2.2574 0.0010 16 6 6.1549 -3.6030 0.0016 17 6 7.5863 -4.0744 0.0013 18 7 5.1019 -4.3701 0.0025 19 7 3.9438 -3.5837 0.0019 20 6 2.5663 -4.0825 0.0020 21 6 2.0937 -4.2522 1.4229 22 1 2.7532 -4.0121 2.2437 23 6 0.8189 -4.7130 1.6750 24 7 0.0156 -5.0048 0.6754 25 14 0.2327 -4.9227 3.4362 26 1 -0.3988 -3.6617 3.9011 27 1 -0.7593 -6.0259 3.4998 28 1 1.3905 -5.2472 4.3079 29 6 4.3220 -2.2656 0.0012 30 7 3.6463 -1.1266 0.0006 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3634 0.5138 0.8900 33 1 -0.3634 0.5138 -0.8899 34 1 0.2145 2.3193 -0.0005 35 1 1.3317 4.5092 -0.0019 36 1 3.7873 4.6490 -0.0024 37 1 5.1433 2.5988 0.0088 38 1 6.1305 1.1126 -0.0018 39 1 9.4938 -0.0194 0.6899 40 1 7.9645 -4.0868 -1.0208 41 1 8.1917 -3.3980 0.6046 42 1 7.6378 -5.0795 0.4200 43 1 1.9218 -3.3699 -0.5126 44 1 2.5279 -5.0435 -0.5109 45 1 -0.8812 -5.3294 0.8528 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000007987499.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:14:00 Heat of formation + Delta-G solvation = 14.646743 kcal Electronic energy + Delta-G solvation = -33234.899859 eV Core-core repulsion = 28799.025791 eV Total energy + Delta-G solvation = -4435.874068 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 367.136 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.46377 -40.06254 -39.94604 -37.84081 -37.00371 -36.21317 -34.23041 -32.82868 -32.22000 -31.50072 -30.03684 -29.03637 -28.72498 -27.00386 -26.08411 -25.29679 -23.89146 -22.95705 -22.08519 -21.24125 -21.04401 -19.25969 -18.19482 -17.93763 -17.22047 -16.83191 -16.76874 -16.53933 -15.74420 -15.64232 -15.44225 -15.32981 -14.84300 -14.71433 -14.48477 -14.17344 -13.66898 -13.37770 -13.28260 -13.20972 -13.00031 -12.79810 -12.49484 -12.41333 -12.39091 -11.92584 -11.74435 -11.60808 -11.47154 -11.29598 -11.01426 -10.89636 -10.86760 -10.84186 -10.74058 -10.34078 -10.31160 -10.21281 -9.59931 -9.33139 -9.00498 -8.60208 -8.45018 -7.72123 -7.66526 -6.21844 -4.27554 0.45076 0.96854 1.46303 1.88536 2.30929 2.82245 2.92766 3.05954 3.22394 3.28160 3.34647 3.57146 3.68429 4.23361 4.27108 4.34430 4.57823 4.78497 4.86376 4.91729 4.95921 5.05351 5.14166 5.14379 5.32361 5.38445 5.45593 5.51151 5.55183 5.60559 5.65552 5.85822 5.90913 5.94263 5.97363 6.08522 6.15892 6.27016 6.31094 6.35616 6.44967 6.49898 6.74669 6.81502 7.04882 7.15213 7.53595 7.66343 7.75757 7.76756 7.91783 8.11454 8.44456 8.75430 9.36693 10.85841 Molecular weight = 367.14amu Principal moments of inertia in cm(-1) A = 0.006233 B = 0.005055 C = 0.003004 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 4490.942369 B = 5538.109793 C = 9317.794529 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.259 6.259 3 C 0.174 3.826 4 C -0.222 4.222 5 C -0.067 4.067 6 C -0.170 4.170 7 C -0.058 4.058 8 C -0.087 4.087 9 C 0.222 3.778 10 C -0.160 4.160 11 C -0.006 4.006 12 C 0.531 3.469 13 O -0.492 6.492 14 O -0.508 6.508 15 C -0.192 4.192 16 C 0.073 3.927 17 C -0.060 4.060 18 N -0.222 5.222 19 N -0.336 5.336 20 C 0.267 3.733 21 C -0.528 4.528 22 H 0.061 0.939 23 C 0.068 3.932 24 N -0.892 5.892 25 Si 0.903 3.097 26 H -0.278 1.278 27 H -0.283 1.283 28 H -0.273 1.273 29 C 0.320 3.680 30 N -0.428 5.428 31 H 0.109 0.891 32 H 0.050 0.950 33 H 0.049 0.951 34 H 0.130 0.870 35 H 0.123 0.877 36 H 0.125 0.875 37 H 0.134 0.866 38 H 0.147 0.853 39 H 0.412 0.588 40 H 0.082 0.918 41 H 0.071 0.929 42 H 0.069 0.931 43 H 0.062 0.938 44 H 0.053 0.947 45 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.265 17.343 -2.025 19.767 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.169 6.169 3 C 0.125 3.875 4 C -0.241 4.241 5 C -0.086 4.086 6 C -0.189 4.189 7 C -0.077 4.077 8 C -0.089 4.089 9 C 0.070 3.930 10 C -0.182 4.182 11 C -0.018 4.018 12 C 0.373 3.627 13 O -0.379 6.379 14 O -0.320 6.320 15 C -0.204 4.204 16 C -0.100 4.100 17 C -0.119 4.119 18 N -0.040 5.040 19 N -0.122 5.122 20 C 0.150 3.850 21 C -0.567 4.567 22 H 0.079 0.921 23 C -0.135 4.135 24 N -0.530 5.530 25 Si 0.730 3.270 26 H -0.204 1.204 27 H -0.209 1.209 28 H -0.198 1.198 29 C 0.076 3.924 30 N -0.141 5.141 31 H 0.127 0.873 32 H 0.069 0.931 33 H 0.067 0.933 34 H 0.148 0.852 35 H 0.141 0.859 36 H 0.143 0.857 37 H 0.151 0.849 38 H 0.164 0.836 39 H 0.271 0.729 40 H 0.101 0.899 41 H 0.090 0.910 42 H 0.088 0.912 43 H 0.079 0.921 44 H 0.071 0.929 45 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges 7.361 15.287 -2.245 17.114 hybrid contribution 0.842 0.841 0.975 1.539 sum 8.203 16.128 -1.269 18.139 Atomic orbital electron populations 1.23178 0.79036 1.04993 1.00118 1.86619 1.20319 1.24190 1.85736 1.19239 0.91451 0.85377 0.91467 1.21262 1.00332 0.92197 1.10308 1.21009 0.94706 0.96868 0.95985 1.20868 0.93766 0.98072 1.06172 1.21034 1.00011 0.90304 0.96350 1.17830 0.89610 0.91335 1.10114 1.19228 0.89075 0.89818 0.94832 1.21860 0.93805 0.97910 1.04629 1.18433 0.88667 0.92667 1.02054 1.20777 0.88605 0.77369 0.75932 1.90906 1.67977 1.38759 1.40294 1.84637 1.27488 1.53486 1.66363 1.19154 0.94277 0.93305 1.13623 1.22116 0.96333 0.89378 1.02159 1.20232 0.87252 1.00967 1.03442 1.76869 0.90922 1.19433 1.16816 1.49557 1.07268 0.99156 1.56264 1.19788 0.69539 0.96538 0.99114 1.21255 0.98986 1.45247 0.91167 0.92093 1.24850 0.96000 0.94750 0.97888 1.69929 1.08007 1.44287 1.30809 0.86403 0.78621 0.77900 0.84039 1.20372 1.20873 1.19764 1.18877 0.87946 0.87644 0.97903 1.66529 1.39471 0.95337 1.12780 0.87277 0.93130 0.93254 0.85177 0.85905 0.85684 0.84858 0.83587 0.72916 0.89945 0.91029 0.91247 0.92068 0.92876 0.92390 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.32 9.81 101.05 0.99 1.31 16 2 O -0.26 -4.73 8.30 -19.13 -0.16 -4.89 16 3 C 0.17 2.72 6.69 -38.83 -0.26 2.46 16 4 C -0.22 -2.72 9.03 -39.47 -0.36 -3.08 16 5 C -0.07 -0.67 10.03 -39.54 -0.40 -1.07 16 6 C -0.17 -1.65 10.03 -39.62 -0.40 -2.05 16 7 C -0.06 -0.65 9.41 -39.25 -0.37 -1.02 16 8 C -0.09 -1.32 5.89 -104.77 -0.62 -1.93 16 9 C 0.22 3.88 6.73 -82.98 -0.56 3.32 16 10 C -0.16 -2.36 9.10 -38.67 -0.35 -2.71 16 11 C -0.01 -0.10 5.86 -104.47 -0.61 -0.72 16 12 C 0.53 7.10 7.34 34.63 0.25 7.36 16 13 O -0.49 -7.26 13.98 -19.23 -0.27 -7.53 16 14 O -0.51 -4.76 13.31 -40.56 -0.54 -5.30 16 15 C -0.19 -3.82 5.98 -106.56 -0.64 -4.46 16 16 C 0.07 1.45 7.21 -82.19 -0.59 0.85 16 17 C -0.06 -0.94 8.58 36.01 0.31 -0.63 16 18 N -0.22 -5.10 12.44 33.82 0.42 -4.68 16 19 N -0.34 -8.26 3.65 -61.59 -0.22 -8.49 16 20 C 0.27 7.12 6.20 -5.19 -0.03 7.09 16 21 C -0.53 -14.94 9.39 -34.44 -0.32 -15.26 16 22 H 0.06 1.79 7.81 -52.49 -0.41 1.38 16 23 C 0.07 1.88 5.46 -17.82 -0.10 1.78 16 24 N -0.89 -25.14 13.29 55.43 0.74 -24.40 16 25 Si 0.90 21.46 29.54 -169.99 -5.02 16.44 16 26 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 27 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 28 H -0.27 -6.53 7.11 56.52 0.40 -6.13 16 29 C 0.32 7.25 8.00 -156.09 -1.25 6.00 16 30 N -0.43 -9.18 8.09 -8.91 -0.07 -9.26 16 31 H 0.11 1.75 8.14 -51.93 -0.42 1.33 16 32 H 0.05 0.64 7.66 -51.93 -0.40 0.24 16 33 H 0.05 0.59 7.66 -51.93 -0.40 0.19 16 34 H 0.13 1.36 6.30 -52.48 -0.33 1.03 16 35 H 0.12 0.89 8.06 -52.49 -0.42 0.47 16 36 H 0.13 0.86 8.06 -52.48 -0.42 0.44 16 37 H 0.13 1.14 6.14 -52.49 -0.32 0.81 16 38 H 0.15 1.57 6.14 -52.49 -0.32 1.25 16 39 H 0.41 1.73 9.11 45.56 0.42 2.15 16 40 H 0.08 1.22 7.76 -51.93 -0.40 0.82 16 41 H 0.07 1.03 6.11 -51.93 -0.32 0.71 16 42 H 0.07 0.99 8.14 -51.93 -0.42 0.57 16 43 H 0.06 1.69 8.14 -51.93 -0.42 1.27 16 44 H 0.05 1.47 8.14 -51.93 -0.42 1.05 16 45 H 0.27 7.07 8.31 -40.82 -0.34 6.73 16 LS Contribution 386.34 15.07 5.82 5.82 Total: -1.00 -34.23 386.34 -8.76 -42.99 By element: Atomic # 1 Polarization: 6.21 SS G_CDS: -4.16 Total: 2.06 kcal Atomic # 6 Polarization: 2.54 SS G_CDS: -5.30 Total: -2.76 kcal Atomic # 7 Polarization: -47.68 SS G_CDS: 0.86 Total: -46.82 kcal Atomic # 8 Polarization: -16.75 SS G_CDS: -0.97 Total: -17.72 kcal Atomic # 14 Polarization: 21.46 SS G_CDS: -5.02 Total: 16.44 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -34.23 -8.76 -42.99 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000007987499.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.632 kcal (2) G-P(sol) polarization free energy of solvation -34.226 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.406 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.985 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.647 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds