Wall clock time and date at job start Tue Mar 31 2020 05:50:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.39762 * 125.84077 * 2 1 4 4 C 1.36110 * 107.82869 * 179.72419 * 3 2 1 5 5 N 1.39471 * 126.21626 * 180.26709 * 4 3 2 6 6 C 1.34779 * 119.99891 * 0.14378 * 5 4 3 7 7 O 1.21293 * 119.99912 * 0.02562 * 6 5 4 8 8 C 1.50706 * 119.99978 * 179.97438 * 6 5 4 9 9 C 1.50694 * 109.46972 * 180.02562 * 8 6 5 10 10 C 1.38330 * 120.01569 * 269.72845 * 9 8 6 11 11 Cl 1.73609 * 120.00635 * 0.02562 * 10 9 8 12 12 C 1.38358 * 119.98843 * 179.70061 * 10 9 8 13 13 C 1.38213 * 120.01385 * 0.59707 * 12 10 9 14 14 C 1.38228 * 120.02349 * 359.68122 * 13 12 10 15 15 C 1.38328 * 120.01240 * 90.00567 * 9 8 6 16 16 Cl 1.73599 * 120.00871 * 359.97438 * 15 9 8 17 17 N 1.35266 * 107.56912 * 0.38873 * 4 3 2 18 18 C 1.46491 * 126.04623 * 179.87688 * 17 4 3 19 19 C 1.50702 * 109.46957 * 269.71277 * 18 17 4 20 20 H 1.08002 * 120.00299 * 0.02562 * 19 18 17 21 21 C 1.37884 * 119.99942 * 179.72213 * 19 18 17 22 22 N 1.31514 * 119.99698 * 0.28408 * 21 19 18 23 23 Si 1.86794 * 119.99837 * 180.27476 * 21 19 18 24 24 H 1.48504 * 109.47196 * 60.00645 * 23 21 19 25 25 H 1.48504 * 109.46887 * 180.02562 * 23 21 19 26 26 H 1.48502 * 109.47679 * 300.00280 * 23 21 19 27 27 N 1.30855 * 125.84075 * 179.97438 * 2 1 3 28 28 H 1.09003 * 109.47188 * 270.01578 * 1 2 3 29 29 H 1.08998 * 109.47119 * 30.01737 * 1 2 3 30 30 H 1.09003 * 109.47108 * 150.01312 * 1 2 3 31 31 H 1.07999 * 126.07992 * 359.93770 * 3 2 1 32 32 H 0.97004 * 120.00096 * 180.14647 * 5 4 3 33 33 H 1.08994 * 109.47320 * 300.00736 * 8 6 5 34 34 H 1.09002 * 109.46478 * 60.00611 * 8 6 5 35 35 H 1.08005 * 119.99616 * 180.31767 * 12 10 9 36 36 H 1.08004 * 119.98912 * 179.69752 * 13 12 10 37 37 H 1.08001 * 119.98889 * 180.02562 * 14 13 12 38 38 H 1.09004 * 109.47166 * 149.71543 * 18 17 4 39 39 H 1.08994 * 109.47507 * 29.71250 * 18 17 4 40 40 H 0.97005 * 119.99651 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3253 1.1330 0.0000 4 6 3.6197 0.7121 0.0062 5 7 4.7513 1.5274 0.0136 6 6 4.6157 2.8684 0.0180 7 8 3.5096 3.3661 0.0160 8 6 5.8384 3.7493 0.0265 9 6 5.4153 5.1957 0.0307 10 6 5.2314 5.8663 -1.1652 11 17 5.4872 5.0416 -2.6713 12 6 4.8369 7.1924 -1.1608 13 6 4.6387 7.8508 0.0382 14 6 4.8279 7.1829 1.2336 15 6 5.2163 5.8549 1.2304 16 17 5.4532 5.0161 2.7317 17 7 3.6093 -0.6405 0.0013 18 6 4.7870 -1.5116 0.0026 19 6 5.1921 -1.8109 -1.4178 20 1 4.6288 -1.3935 -2.2393 21 6 6.2856 -2.6124 -1.6685 22 7 6.9718 -3.1203 -0.6681 23 14 6.7923 -2.9770 -3.4290 24 1 7.1127 -1.7052 -4.1255 25 1 7.9891 -3.8562 -3.4277 26 1 5.6777 -3.6601 -4.1337 27 7 2.2731 -1.0608 0.0005 28 1 -0.3634 0.0003 1.0277 29 1 -0.3633 0.8898 -0.5141 30 1 -0.3633 -0.8901 -0.5136 31 1 1.9901 2.1596 -0.0009 32 1 5.6359 1.1294 0.0155 33 1 6.4297 3.5415 0.9182 34 1 6.4372 3.5481 -0.8617 35 1 4.6883 7.7147 -2.0944 36 1 4.3355 8.8874 0.0412 37 1 4.6724 7.6977 2.1701 38 1 4.5494 -2.4431 0.5166 39 1 5.6079 -1.0120 0.5169 40 1 7.7409 -3.6845 -0.8445 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000058244781.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:50:14 Heat of formation + Delta-G solvation = 50.344946 kcal Electronic energy + Delta-G solvation = -27713.568490 eV Core-core repulsion = 23581.685633 eV Total energy + Delta-G solvation = -4131.882857 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 367.060 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -40.91280 -40.07510 -38.81010 -36.99081 -36.48993 -34.70893 -33.74422 -33.31572 -32.04671 -30.92447 -29.33242 -28.73589 -27.32924 -26.01369 -23.16478 -23.12127 -22.58775 -21.12554 -19.70545 -19.26433 -17.60440 -16.97703 -16.73717 -16.62793 -16.44111 -15.75533 -15.09085 -14.95670 -14.62066 -14.48893 -14.13973 -14.00515 -13.83763 -13.41307 -12.83031 -12.78493 -12.66908 -12.49705 -12.46725 -12.41523 -12.02770 -11.80638 -11.74704 -11.55264 -11.36272 -11.11129 -11.09397 -11.04538 -10.87099 -10.37179 -10.31809 -9.95095 -9.82051 -9.50081 -9.11089 -9.00463 -8.71342 -7.89534 -7.41119 -6.32880 -4.41257 0.69411 0.70380 1.60002 2.03992 2.27590 2.78389 3.11224 3.18412 3.19529 3.23029 3.28062 3.63013 3.82445 4.14175 4.25035 4.45583 4.49894 4.73477 4.84903 5.00459 5.04107 5.05301 5.14024 5.38923 5.41354 5.66102 5.71115 5.78375 5.85777 6.04475 6.17961 6.19878 6.21853 6.29377 6.45198 6.69126 6.85125 7.05561 7.53572 7.59381 7.64342 7.80551 7.92859 8.31378 8.63375 8.72646 9.26202 10.74215 Molecular weight = 367.06amu Principal moments of inertia in cm(-1) A = 0.009283 B = 0.003185 C = 0.002852 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3015.641918 B = 8790.287511 C = 9815.571207 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 C 0.050 3.950 3 C -0.294 4.294 4 C 0.303 3.697 5 N -0.639 5.639 6 C 0.528 3.472 7 O -0.503 6.503 8 C -0.112 4.112 9 C -0.046 4.046 10 C -0.011 4.011 11 Cl -0.050 7.050 12 C -0.105 4.105 13 C -0.096 4.096 14 C -0.106 4.106 15 C -0.011 4.011 16 Cl -0.052 7.052 17 N -0.344 5.344 18 C 0.257 3.743 19 C -0.540 4.540 20 H 0.064 0.936 21 C 0.067 3.933 22 N -0.890 5.890 23 Si 0.906 3.094 24 H -0.274 1.274 25 H -0.283 1.283 26 H -0.273 1.273 27 N -0.286 5.286 28 H 0.067 0.933 29 H 0.069 0.931 30 H 0.066 0.934 31 H 0.161 0.839 32 H 0.416 0.584 33 H 0.116 0.884 34 H 0.117 0.883 35 H 0.140 0.860 36 H 0.142 0.858 37 H 0.140 0.860 38 H 0.056 0.944 39 H 0.044 0.956 40 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.884 22.577 3.086 22.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C -0.115 4.115 3 C -0.326 4.326 4 C 0.081 3.919 5 N -0.286 5.286 6 C 0.314 3.686 7 O -0.377 6.377 8 C -0.152 4.152 9 C -0.048 4.048 10 C -0.039 4.039 11 Cl -0.020 7.020 12 C -0.124 4.124 13 C -0.114 4.114 14 C -0.125 4.125 15 C -0.038 4.038 16 Cl -0.023 7.023 17 N -0.130 5.130 18 C 0.139 3.861 19 C -0.579 4.579 20 H 0.082 0.918 21 C -0.136 4.136 22 N -0.528 5.528 23 Si 0.732 3.268 24 H -0.200 1.200 25 H -0.209 1.209 26 H -0.199 1.199 27 N -0.111 5.111 28 H 0.086 0.914 29 H 0.088 0.912 30 H 0.085 0.915 31 H 0.178 0.822 32 H 0.253 0.747 33 H 0.134 0.866 34 H 0.135 0.865 35 H 0.158 0.842 36 H 0.159 0.841 37 H 0.158 0.842 38 H 0.074 0.926 39 H 0.062 0.938 40 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -1.265 21.323 3.138 21.590 hybrid contribution 1.110 0.062 -0.963 1.471 sum -0.155 21.385 2.175 21.496 Atomic orbital electron populations 1.20011 0.87651 1.02400 1.01992 1.22020 0.96477 0.91071 1.01905 1.21253 0.89061 1.00402 1.21893 1.17901 0.87952 0.83302 1.02736 1.42715 1.08347 1.05446 1.72093 1.20079 0.90837 0.81245 0.76456 1.90654 1.26369 1.73611 1.47028 1.20753 0.97355 0.89951 1.07138 1.18862 1.00510 0.94832 0.90574 1.20657 1.02906 0.93387 0.86906 1.98410 1.94718 1.78644 1.30265 1.21128 0.99162 0.92468 0.99667 1.21064 0.99016 1.00383 0.90937 1.21120 0.99298 0.92367 0.99687 1.20625 1.03112 0.93282 0.86789 1.98396 1.95041 1.78052 1.30833 1.49336 1.06512 1.02165 1.54976 1.19606 0.77839 0.89751 0.98879 1.21307 1.13119 1.32107 0.91354 0.91758 1.24928 0.95687 0.94882 0.98137 1.69909 1.19070 1.32717 1.31078 0.86421 0.78105 0.78515 0.83713 1.19977 1.20886 1.19859 1.77351 0.86141 1.21805 1.25823 0.91414 0.91185 0.91534 0.82187 0.74715 0.86592 0.86451 0.84191 0.84067 0.84209 0.92583 0.93842 0.92117 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.95 10.44 36.00 0.38 -0.57 16 2 C 0.05 1.03 7.21 -82.44 -0.59 0.43 16 3 C -0.29 -6.15 9.58 -39.78 -0.38 -6.53 16 4 C 0.30 6.50 7.66 -153.16 -1.17 5.32 16 5 N -0.64 -11.36 5.41 -11.46 -0.06 -11.42 16 6 C 0.53 8.44 7.79 -10.98 -0.09 8.36 16 7 O -0.50 -9.21 13.16 5.55 0.07 -9.13 16 8 C -0.11 -1.36 5.04 -29.03 -0.15 -1.51 16 9 C -0.05 -0.54 4.38 -104.56 -0.46 -1.00 16 10 C -0.01 -0.13 6.31 -39.50 -0.25 -0.38 16 11 Cl -0.05 -0.58 27.29 -51.86 -1.42 -2.00 16 12 C -0.11 -0.92 9.83 -39.55 -0.39 -1.31 16 13 C -0.10 -0.70 10.04 -39.59 -0.40 -1.10 16 14 C -0.11 -0.90 9.83 -39.54 -0.39 -1.29 16 15 C -0.01 -0.12 6.31 -39.50 -0.25 -0.37 16 16 Cl -0.05 -0.57 27.30 -51.86 -1.42 -1.99 16 17 N -0.34 -8.17 3.60 -61.58 -0.22 -8.40 16 18 C 0.26 6.46 6.01 -5.20 -0.03 6.43 16 19 C -0.54 -14.59 9.39 -34.44 -0.32 -14.91 16 20 H 0.06 1.81 7.81 -52.49 -0.41 1.40 16 21 C 0.07 1.80 5.46 -17.82 -0.10 1.70 16 22 N -0.89 -24.35 13.29 55.43 0.74 -23.61 16 23 Si 0.91 20.77 29.54 -169.99 -5.02 15.74 16 24 H -0.27 -6.18 7.11 56.52 0.40 -5.78 16 25 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 26 H -0.27 -6.35 7.11 56.52 0.40 -5.95 16 27 N -0.29 -6.77 12.56 33.65 0.42 -6.34 16 28 H 0.07 0.92 8.14 -51.93 -0.42 0.49 16 29 H 0.07 0.93 8.14 -51.93 -0.42 0.51 16 30 H 0.07 0.97 8.14 -51.93 -0.42 0.55 16 31 H 0.16 3.27 5.83 -52.49 -0.31 2.96 16 32 H 0.42 6.80 7.96 -40.82 -0.32 6.48 16 33 H 0.12 1.21 6.90 -51.93 -0.36 0.85 16 34 H 0.12 1.29 6.89 -51.93 -0.36 0.93 16 35 H 0.14 0.93 8.06 -52.48 -0.42 0.50 16 36 H 0.14 0.60 8.06 -52.48 -0.42 0.18 16 37 H 0.14 0.89 8.06 -52.49 -0.42 0.46 16 38 H 0.06 1.52 8.14 -51.93 -0.42 1.10 16 39 H 0.04 1.05 7.49 -51.93 -0.39 0.66 16 40 H 0.27 6.97 8.31 -40.82 -0.34 6.63 16 LS Contribution 376.71 15.07 5.68 5.68 Total: -1.00 -32.10 376.71 -10.06 -42.15 By element: Atomic # 1 Polarization: 10.28 SS G_CDS: -4.24 Total: 6.04 kcal Atomic # 6 Polarization: -2.13 SS G_CDS: -4.59 Total: -6.72 kcal Atomic # 7 Polarization: -50.65 SS G_CDS: 0.88 Total: -49.77 kcal Atomic # 8 Polarization: -9.21 SS G_CDS: 0.07 Total: -9.13 kcal Atomic # 14 Polarization: 20.77 SS G_CDS: -5.02 Total: 15.74 kcal Atomic # 17 Polarization: -1.16 SS G_CDS: -2.83 Total: -3.99 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -32.10 -10.06 -42.15 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000058244781.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.496 kcal (2) G-P(sol) polarization free energy of solvation -32.096 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.400 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.151 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.345 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds