Wall clock time and date at job start Tue Mar 31 2020 06:22:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 O 1.21255 * 119.99930 * 2 1 4 4 C 1.47184 * 120.00018 * 180.02562 * 2 1 3 5 5 C 1.39876 * 120.14741 * 359.97115 * 4 2 1 6 6 C 1.37891 * 119.94302 * 180.02562 * 5 4 2 7 7 C 1.38336 * 120.22732 * 359.74217 * 6 5 4 8 8 C 1.38849 * 120.29857 * 0.51997 * 7 6 5 9 9 O 1.35907 * 119.97252 * 179.76280 * 8 7 6 10 10 C 1.42907 * 117.00030 * 359.72038 * 9 8 7 11 11 C 1.50698 * 109.47037 * 180.02562 * 10 9 8 12 12 O 1.21288 * 120.00490 * 354.73231 * 11 10 9 13 13 N 1.34776 * 119.99735 * 174.73680 * 11 10 9 14 14 C 1.46507 * 119.99872 * 184.45583 * 13 11 10 15 15 C 1.50709 * 109.46570 * 269.99364 * 14 13 11 16 16 H 1.07997 * 119.99916 * 0.02562 * 15 14 13 17 17 C 1.37875 * 119.99464 * 180.02562 * 15 14 13 18 18 N 1.31514 * 120.00330 * 359.97438 * 17 15 14 19 19 Si 1.86800 * 119.99548 * 180.02562 * 17 15 14 20 20 H 1.48498 * 109.47470 * 59.99729 * 19 17 15 21 21 H 1.48509 * 109.47089 * 179.97438 * 19 17 15 22 22 H 1.48498 * 109.47306 * 299.99588 * 19 17 15 23 23 C 1.39924 * 120.00395 * 4.44548 * 13 11 10 24 24 C 1.38897 * 120.06364 * 66.96739 * 23 13 11 25 25 C 1.38100 * 119.92573 * 180.27539 * 24 23 13 26 26 C 1.38301 * 120.06655 * 359.47364 * 25 24 23 27 27 C 1.38258 * 120.14572 * 0.27764 * 26 25 24 28 28 C 1.50699 * 119.96290 * 179.97438 * 27 26 25 29 29 C 1.38133 * 120.07153 * 359.97438 * 27 26 25 30 30 C 1.38421 * 120.05663 * 359.47806 * 8 7 6 31 31 H 1.09005 * 109.46755 * 269.99299 * 1 2 3 32 32 H 1.08997 * 109.47456 * 29.99290 * 1 2 3 33 33 H 1.09003 * 109.46853 * 149.99730 * 1 2 3 34 34 H 1.08007 * 120.02724 * 0.02562 * 5 4 2 35 35 H 1.08000 * 119.88822 * 180.02562 * 6 5 4 36 36 H 1.08000 * 119.84578 * 180.27880 * 7 6 5 37 37 H 1.09001 * 109.46900 * 60.00232 * 10 9 8 38 38 H 1.08999 * 109.46864 * 300.00107 * 10 9 8 39 39 H 1.08993 * 109.47143 * 29.99602 * 14 13 11 40 40 H 1.09000 * 109.47143 * 149.99997 * 14 13 11 41 41 H 0.97002 * 119.99853 * 180.02562 * 18 17 15 42 42 H 1.08001 * 120.04047 * 0.02562 * 24 23 13 43 43 H 1.07997 * 119.96379 * 179.74785 * 25 24 23 44 44 H 1.08001 * 119.92501 * 180.25263 * 26 25 24 45 45 H 1.08997 * 109.47155 * 90.00310 * 28 27 26 46 46 H 1.09005 * 109.46711 * 209.99363 * 28 27 26 47 47 H 1.08993 * 109.47294 * 329.99621 * 28 27 26 48 48 H 1.07990 * 120.03958 * 179.97438 * 29 27 26 49 49 H 1.07997 * 120.12050 * 180.23260 * 30 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1133 1.0501 0.0000 4 6 2.2429 -1.2746 -0.0006 5 6 1.5467 -2.4878 -0.0005 6 6 2.2404 -3.6795 -0.0005 7 6 3.6237 -3.6801 -0.0059 8 6 4.3247 -2.4815 -0.0006 9 8 5.6838 -2.4898 -0.0011 10 6 6.3248 -3.7671 -0.0011 11 6 7.8199 -3.5787 -0.0011 12 8 8.2910 -2.4652 -0.0975 13 7 8.6338 -4.6477 0.1060 14 6 10.0832 -4.4580 0.2043 15 6 10.6843 -4.4555 -1.1777 16 1 10.0501 -4.5822 -2.0426 17 6 12.0439 -4.2916 -1.3377 18 7 12.8161 -4.1369 -0.2844 19 14 12.7889 -4.2879 -3.0507 20 1 12.1981 -3.1810 -3.8451 21 1 14.2581 -4.0957 -2.9511 22 1 12.5028 -5.5834 -3.7178 23 6 8.0944 -5.9387 0.1234 24 6 7.4746 -6.4493 -1.0099 25 6 6.9383 -7.7217 -0.9878 26 6 7.0275 -8.4914 0.1578 27 6 7.6484 -7.9880 1.2859 28 6 7.7428 -8.8300 2.5322 29 6 8.1823 -6.7141 1.2719 30 6 3.6406 -1.2782 -0.0006 31 1 -0.3633 -0.0001 1.0277 32 1 -0.3634 0.8900 -0.5137 33 1 -0.3633 -0.8900 -0.5139 34 1 0.4666 -2.4911 -0.0005 35 1 1.7019 -4.6157 -0.0009 36 1 4.1608 -4.6170 -0.0105 37 1 6.0282 -4.3224 -0.8909 38 1 6.0288 -4.3221 0.8891 39 1 10.2927 -3.5068 0.6934 40 1 10.5171 -5.2700 0.7878 41 1 13.7725 -4.0212 -0.3971 42 1 7.4086 -5.8504 -1.9062 43 1 6.4526 -8.1177 -1.8673 44 1 6.6109 -9.4877 0.1713 45 1 8.6635 -9.4129 2.5080 46 1 7.7458 -8.1823 3.4089 47 1 6.8874 -9.5037 2.5811 48 1 8.6668 -6.3212 2.1535 49 1 4.1848 -0.3454 -0.0003 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000069779347.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:22:57 Heat of formation + Delta-G solvation = -50.586475 kcal Electronic energy + Delta-G solvation = -32131.349133 eV Core-core repulsion = 27796.186683 eV Total energy + Delta-G solvation = -4335.162449 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 367.162 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -40.70096 -40.06852 -39.28445 -38.31730 -37.08836 -35.13177 -32.92756 -32.26411 -31.96957 -31.26959 -29.68668 -29.45070 -28.74761 -26.82579 -26.61995 -24.10083 -23.01207 -22.63046 -22.38352 -21.54700 -20.15652 -18.90556 -18.19355 -17.20109 -16.68214 -16.53828 -16.23419 -16.09979 -16.01303 -15.52186 -15.39169 -15.28450 -15.12002 -14.82249 -14.21899 -14.09226 -13.97305 -13.77091 -13.66916 -13.26214 -12.97880 -12.87930 -12.79706 -12.66198 -12.45411 -12.24348 -12.18303 -12.07012 -11.88833 -11.54501 -11.31601 -11.26887 -11.18812 -11.00783 -10.90957 -10.67331 -10.22202 -10.06877 -9.82648 -9.43371 -9.31045 -8.73622 -8.57164 -8.48443 -8.45604 -7.80128 -6.10461 -4.15190 0.36495 1.16361 1.41117 1.49796 2.14423 2.70061 3.04969 3.30076 3.34208 3.37836 3.52998 3.67966 3.83337 3.96744 4.40633 4.46848 4.59531 4.68835 4.72981 4.80766 4.90443 4.94254 4.97920 5.02962 5.05647 5.12979 5.19368 5.24396 5.24968 5.30214 5.35861 5.52152 5.59546 5.60827 5.65665 5.70004 5.81806 5.97169 6.01183 6.05626 6.08270 6.18642 6.37145 6.50303 6.62201 6.68068 6.84252 7.08709 7.20472 7.23557 7.24073 7.36104 7.84128 8.11029 8.15897 8.69570 8.88208 9.49334 10.98008 Molecular weight = 367.16amu Principal moments of inertia in cm(-1) A = 0.008645 B = 0.002626 C = 0.002159 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3238.144214 B =10661.242363 C =12963.764862 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C 0.395 3.605 3 O -0.453 6.453 4 C -0.136 4.136 5 C -0.117 4.117 6 C -0.091 4.091 7 C -0.180 4.180 8 C 0.126 3.874 9 O -0.285 6.285 10 C 0.042 3.958 11 C 0.515 3.485 12 O -0.499 6.499 13 N -0.556 5.556 14 C 0.251 3.749 15 C -0.528 4.528 16 H 0.058 0.942 17 C 0.063 3.937 18 N -0.894 5.894 19 Si 0.899 3.101 20 H -0.275 1.275 21 H -0.285 1.285 22 H -0.276 1.276 23 C 0.160 3.840 24 C -0.134 4.134 25 C -0.105 4.105 26 C -0.132 4.132 27 C -0.076 4.076 28 C -0.113 4.113 29 C -0.123 4.123 30 C -0.092 4.092 31 H 0.098 0.902 32 H 0.088 0.912 33 H 0.087 0.913 34 H 0.134 0.866 35 H 0.132 0.868 36 H 0.135 0.865 37 H 0.091 0.909 38 H 0.088 0.912 39 H 0.048 0.952 40 H 0.039 0.961 41 H 0.265 0.735 42 H 0.123 0.877 43 H 0.123 0.877 44 H 0.119 0.881 45 H 0.071 0.929 46 H 0.065 0.935 47 H 0.064 0.936 48 H 0.126 0.874 49 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -25.081 -7.481 3.514 26.408 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.255 4.255 2 C 0.272 3.728 3 O -0.328 6.328 4 C -0.137 4.137 5 C -0.136 4.136 6 C -0.109 4.109 7 C -0.199 4.199 8 C 0.080 3.920 9 O -0.197 6.197 10 C -0.037 4.037 11 C 0.300 3.700 12 O -0.372 6.372 13 N -0.286 5.286 14 C 0.134 3.866 15 C -0.566 4.566 16 H 0.076 0.924 17 C -0.139 4.139 18 N -0.532 5.532 19 Si 0.727 3.273 20 H -0.200 1.200 21 H -0.211 1.211 22 H -0.202 1.202 23 C 0.068 3.932 24 C -0.154 4.154 25 C -0.123 4.123 26 C -0.151 4.151 27 C -0.077 4.077 28 C -0.169 4.169 29 C -0.143 4.143 30 C -0.111 4.111 31 H 0.116 0.884 32 H 0.107 0.893 33 H 0.106 0.894 34 H 0.151 0.849 35 H 0.150 0.850 36 H 0.152 0.848 37 H 0.109 0.891 38 H 0.106 0.894 39 H 0.066 0.934 40 H 0.057 0.943 41 H 0.075 0.925 42 H 0.141 0.859 43 H 0.141 0.859 44 H 0.137 0.863 45 H 0.089 0.911 46 H 0.084 0.916 47 H 0.083 0.917 48 H 0.144 0.856 49 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -24.110 -6.049 3.528 25.106 hybrid contribution 0.627 -0.552 -1.057 1.347 sum -23.483 -6.601 2.471 24.518 Atomic orbital electron populations 1.22225 0.93475 1.04994 1.04837 1.22511 0.91704 0.87456 0.71111 1.90572 1.72133 1.34279 1.35772 1.20275 0.93256 0.95096 1.05098 1.21318 1.00050 0.91278 1.00935 1.20904 0.93268 0.98295 0.98433 1.21601 0.95669 0.97438 1.05202 1.18989 0.82906 0.93918 0.96225 1.86218 1.15424 1.30088 1.87926 1.22710 0.92850 0.84695 1.03456 1.19695 0.86705 0.85249 0.78325 1.90757 1.76450 1.23527 1.46429 1.45900 1.09640 1.01965 1.71113 1.19490 0.70349 0.98630 0.98143 1.21293 0.92479 1.50600 0.92256 0.92379 1.24903 0.96870 0.94838 0.97289 1.69911 1.05251 1.49032 1.29044 0.86531 0.77966 0.78647 0.84172 1.20049 1.21072 1.20190 1.17764 0.95749 0.86633 0.93027 1.21376 1.00439 0.96385 0.97200 1.20955 0.99602 0.93767 0.97990 1.20954 1.01338 0.99693 0.93086 1.19749 0.97789 0.94181 0.95963 1.20779 1.02285 0.99069 0.94796 1.21195 1.00876 0.94380 0.97820 1.20694 0.92772 0.97287 1.00336 0.88365 0.89344 0.89384 0.84860 0.85012 0.84769 0.89103 0.89414 0.93358 0.94339 0.92524 0.85859 0.85943 0.86264 0.91060 0.91561 0.91705 0.85608 0.83865 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -1.10 9.75 36.01 0.35 -0.75 16 2 C 0.39 4.03 7.23 -30.68 -0.22 3.81 16 3 O -0.45 -6.43 17.09 5.58 0.10 -6.33 16 4 C -0.14 -1.45 5.87 -105.08 -0.62 -2.07 16 5 C -0.12 -0.93 9.36 -39.10 -0.37 -1.29 16 6 C -0.09 -0.74 10.02 -39.67 -0.40 -1.14 16 7 C -0.18 -1.91 9.04 -39.32 -0.36 -2.26 16 8 C 0.13 1.73 6.68 -39.29 -0.26 1.47 16 9 O -0.28 -4.85 9.67 -39.30 -0.38 -5.23 16 10 C 0.04 0.65 3.89 36.00 0.14 0.79 16 11 C 0.51 10.85 7.61 -10.99 -0.08 10.76 16 12 O -0.50 -12.90 16.13 -14.30 -0.23 -13.13 16 13 N -0.56 -11.73 2.51 -114.73 -0.29 -12.01 16 14 C 0.25 6.48 5.07 -5.19 -0.03 6.46 16 15 C -0.53 -14.89 9.39 -34.44 -0.32 -15.22 16 16 H 0.06 1.64 7.81 -52.49 -0.41 1.23 16 17 C 0.06 1.81 5.46 -17.82 -0.10 1.71 16 18 N -0.89 -26.38 13.29 55.43 0.74 -25.65 16 19 Si 0.90 21.96 29.54 -169.99 -5.02 16.94 16 20 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 21 H -0.29 -6.84 7.11 56.52 0.40 -6.43 16 22 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 23 C 0.16 2.76 4.42 -83.69 -0.37 2.39 16 24 C -0.13 -2.01 8.46 -39.39 -0.33 -2.34 16 25 C -0.10 -1.25 10.04 -39.61 -0.40 -1.65 16 26 C -0.13 -1.50 9.70 -39.55 -0.38 -1.88 16 27 C -0.08 -0.94 5.88 -104.65 -0.62 -1.56 16 28 C -0.11 -1.06 10.01 36.01 0.36 -0.70 16 29 C -0.12 -1.86 9.29 -39.39 -0.37 -2.23 16 30 C -0.09 -1.24 9.54 -38.94 -0.37 -1.61 16 31 H 0.10 0.40 8.14 -51.93 -0.42 -0.02 16 32 H 0.09 0.47 8.14 -51.93 -0.42 0.05 16 33 H 0.09 0.30 6.47 -51.93 -0.34 -0.04 16 34 H 0.13 0.59 6.35 -52.48 -0.33 0.26 16 35 H 0.13 0.70 8.06 -52.49 -0.42 0.27 16 36 H 0.13 1.23 6.28 -52.49 -0.33 0.90 16 37 H 0.09 1.22 6.50 -51.93 -0.34 0.88 16 38 H 0.09 1.16 7.55 -51.93 -0.39 0.76 16 39 H 0.05 1.39 7.49 -51.93 -0.39 1.00 16 40 H 0.04 1.01 7.83 -51.93 -0.41 0.60 16 41 H 0.27 7.41 8.31 -40.82 -0.34 7.07 16 42 H 0.12 1.85 7.92 -52.49 -0.42 1.44 16 43 H 0.12 1.15 8.06 -52.49 -0.42 0.72 16 44 H 0.12 1.03 8.06 -52.49 -0.42 0.61 16 45 H 0.07 0.66 8.14 -51.93 -0.42 0.24 16 46 H 0.07 0.59 8.08 -51.93 -0.42 0.17 16 47 H 0.06 0.49 8.08 -51.93 -0.42 0.07 16 48 H 0.13 1.90 8.06 -52.49 -0.42 1.48 16 49 H 0.14 2.11 7.65 -52.49 -0.40 1.71 16 LS Contribution 419.21 15.07 6.32 6.32 Total: -1.00 -35.76 419.21 -10.19 -45.95 By element: Atomic # 1 Polarization: 7.14 SS G_CDS: -6.68 Total: 0.46 kcal Atomic # 6 Polarization: -2.57 SS G_CDS: -4.74 Total: -7.31 kcal Atomic # 7 Polarization: -38.11 SS G_CDS: 0.45 Total: -37.66 kcal Atomic # 8 Polarization: -24.17 SS G_CDS: -0.52 Total: -24.69 kcal Atomic # 14 Polarization: 21.96 SS G_CDS: -5.02 Total: 16.94 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -35.76 -10.19 -45.95 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000069779347.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.639 kcal (2) G-P(sol) polarization free energy of solvation -35.758 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.396 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.948 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.586 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds