Wall clock time and date at job start Tue Mar 31 2020 06:19:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.09000 * 109.46983 * 2 1 4 4 C 1.50706 * 109.47033 * 119.99555 * 2 1 3 5 5 H 1.07998 * 119.99687 * 120.00092 * 4 2 1 6 6 C 1.37878 * 119.99974 * 300.00152 * 4 2 1 7 7 N 1.31512 * 120.00001 * 0.02562 * 6 4 2 8 8 Si 1.86799 * 119.99925 * 180.02562 * 6 4 2 9 9 H 1.48498 * 109.47200 * 59.99580 * 8 6 4 10 10 H 1.48496 * 109.47229 * 180.02562 * 8 6 4 11 11 H 1.48508 * 109.46917 * 299.99969 * 8 6 4 12 12 N 1.46494 * 109.47145 * 239.99566 * 2 1 3 13 13 C 1.46500 * 120.00298 * 299.99987 * 12 2 1 14 14 C 1.34779 * 119.99761 * 120.00144 * 12 2 1 15 15 O 1.21591 * 120.00400 * 359.97438 * 14 12 2 16 16 N 1.34784 * 119.99933 * 180.02562 * 14 12 2 17 17 C 1.40208 * 119.99924 * 174.37450 * 16 14 12 18 18 C 1.38683 * 120.08762 * 335.22781 * 17 16 14 19 19 C 1.38230 * 120.02461 * 179.70138 * 18 17 16 20 20 C 1.38290 * 120.19645 * 0.60126 * 19 18 17 21 21 C 1.38312 * 120.17738 * 359.67804 * 20 19 18 22 22 Cl 1.73598 * 120.01060 * 180.02562 * 21 20 19 23 23 C 1.38808 * 119.97542 * 0.02562 * 21 20 19 24 24 N 1.40006 * 120.09850 * 179.97438 * 23 21 20 25 25 C 1.47021 * 110.99861 * 63.65839 * 24 23 21 26 26 C 1.53096 * 109.25426 * 177.60764 * 25 24 23 27 27 O 1.43010 * 109.26113 * 56.84971 * 26 25 24 28 28 C 1.43020 * 113.73847 * 301.32427 * 27 26 25 29 29 C 1.47017 * 111.00060 * 300.02368 * 24 23 21 30 30 H 1.08996 * 109.46959 * 60.00338 * 1 2 3 31 31 H 1.09002 * 109.46992 * 180.02562 * 1 2 3 32 32 H 1.08995 * 109.46862 * 300.00313 * 1 2 3 33 33 H 0.97001 * 120.00106 * 180.02562 * 7 6 4 34 34 H 1.08997 * 109.46983 * 89.99866 * 13 12 2 35 35 H 1.08998 * 109.47390 * 209.99993 * 13 12 2 36 36 H 1.09003 * 109.46933 * 329.99969 * 13 12 2 37 37 H 0.96996 * 119.99576 * 354.37585 * 16 14 12 38 38 H 1.08005 * 119.98906 * 0.02562 * 18 17 16 39 39 H 1.07993 * 119.90767 * 180.27613 * 19 18 17 40 40 H 1.08001 * 119.91032 * 179.70006 * 20 19 18 41 41 H 1.08997 * 109.50624 * 297.53866 * 25 24 23 42 42 H 1.08994 * 109.50313 * 57.67017 * 25 24 23 43 43 H 1.08999 * 109.50534 * 296.91140 * 26 25 24 44 44 H 1.08996 * 109.54006 * 176.80561 * 26 25 24 45 45 H 1.09000 * 109.51098 * 298.74202 * 28 27 26 46 46 H 1.09000 * 109.54489 * 178.62573 * 28 27 26 47 47 H 1.09001 * 109.50454 * 302.32839 * 29 24 23 48 48 H 1.08996 * 109.50701 * 62.46039 * 29 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0324 -0.7103 1.2306 5 1 2.6533 -1.5884 1.1315 6 6 1.6992 -0.2392 2.4828 7 7 0.9427 0.8298 2.6034 8 14 2.3225 -1.1193 4.0081 9 1 3.8075 -1.1187 4.0079 10 1 1.8269 -0.4196 5.2205 11 1 1.8280 -2.5196 4.0083 12 7 2.0184 -0.6907 -1.1961 13 6 1.6645 -2.0933 -1.4279 14 6 2.7933 -0.0357 -2.0832 15 8 3.0866 1.1286 -1.8912 16 7 3.2421 -0.6710 -3.1840 17 6 3.9483 0.0399 -4.1647 18 6 3.7645 1.4079 -4.2994 19 6 4.4659 2.1085 -5.2627 20 6 5.3432 1.4474 -6.1028 21 6 5.5285 0.0823 -5.9795 22 17 6.6313 -0.7431 -7.0361 23 6 4.8325 -0.6274 -5.0107 24 7 5.0177 -2.0093 -4.8840 25 6 6.4008 -2.3221 -4.4958 26 6 6.5434 -3.8351 -4.3107 27 8 6.1573 -4.4966 -5.5184 28 6 4.8156 -4.2149 -5.9256 29 6 4.6554 -2.7057 -6.1271 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3633 0.5139 0.8899 33 1 0.7087 1.1615 3.4843 34 1 0.7377 -2.1445 -1.9992 35 1 2.4629 -2.5820 -1.9862 36 1 1.5296 -2.5969 -0.4706 37 1 3.0766 -1.6199 -3.2976 38 1 3.0769 1.9269 -3.6480 39 1 4.3247 3.1744 -5.3630 40 1 5.8852 1.9986 -6.8570 41 1 7.0830 -1.9851 -5.2763 42 1 6.6392 -1.8168 -3.5600 43 1 5.9007 -4.1640 -3.4941 44 1 7.5802 -4.0779 -4.0782 45 1 4.1226 -4.5548 -5.1559 46 1 4.6023 -4.7316 -6.8613 47 1 3.6199 -2.4803 -6.3820 48 1 5.3097 -2.3748 -6.9336 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000072314427.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:19:09 Heat of formation + Delta-G solvation = -16.573116 kcal Electronic energy + Delta-G solvation = -32276.279295 eV Core-core repulsion = 27972.451677 eV Total energy + Delta-G solvation = -4303.827618 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 367.145 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -40.93043 -39.73193 -38.50362 -36.83045 -35.73633 -35.50691 -34.34928 -32.80886 -31.39227 -30.22875 -30.00721 -28.68076 -26.54389 -26.16250 -25.25120 -24.21886 -23.37742 -22.28657 -21.06983 -20.61558 -19.19018 -18.18829 -17.37533 -17.06642 -16.38793 -16.33246 -15.85517 -15.51691 -15.36663 -15.23208 -15.10003 -14.89543 -14.57678 -14.18000 -14.02911 -13.79988 -13.73316 -13.22388 -12.78719 -12.56614 -12.53904 -12.21478 -12.13066 -11.89919 -11.67860 -11.66475 -11.52533 -11.29000 -11.09384 -11.00495 -10.88340 -10.78714 -10.72450 -10.32057 -10.22076 -10.19602 -9.92701 -9.36446 -9.20720 -8.73058 -8.59919 -8.46007 -8.03516 -7.57799 -6.10684 -4.18741 1.03698 1.22597 1.83490 3.11324 3.25933 3.31437 3.33638 3.38775 3.45619 3.68842 3.90585 4.32015 4.46671 4.69167 4.71767 4.86405 4.95322 5.00549 5.04652 5.10726 5.20805 5.26088 5.33835 5.37396 5.43368 5.47330 5.59859 5.63053 5.74117 5.77238 5.92541 6.02753 6.08340 6.26122 6.36006 6.54065 6.57386 6.65913 6.75441 6.83774 6.92335 6.97715 7.10644 7.20502 7.40584 7.64312 7.77868 8.02095 8.16903 8.55717 8.81127 9.11088 9.48039 10.94600 Molecular weight = 367.14amu Principal moments of inertia in cm(-1) A = 0.012383 B = 0.002890 C = 0.002567 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2260.629483 B = 9687.388418 C =10903.115030 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.273 3.727 3 H 0.065 0.935 4 C -0.528 4.528 5 H 0.059 0.941 6 C 0.066 3.934 7 N -0.887 5.887 8 Si 0.899 3.101 9 H -0.277 1.277 10 H -0.286 1.286 11 H -0.277 1.277 12 N -0.599 5.599 13 C 0.083 3.917 14 C 0.695 3.305 15 O -0.579 6.579 16 N -0.677 5.677 17 C 0.227 3.773 18 C -0.126 4.126 19 C -0.084 4.084 20 C -0.137 4.137 21 C -0.043 4.043 22 Cl -0.063 7.063 23 C 0.044 3.956 24 N -0.491 5.491 25 C 0.008 3.992 26 C 0.066 3.934 27 O -0.384 6.384 28 C 0.067 3.933 29 C -0.002 4.002 30 H 0.011 0.989 31 H 0.029 0.971 32 H 0.094 0.906 33 H 0.264 0.736 34 H 0.044 0.956 35 H 0.048 0.952 36 H 0.085 0.915 37 H 0.411 0.589 38 H 0.162 0.838 39 H 0.135 0.865 40 H 0.130 0.870 41 H 0.065 0.935 42 H 0.086 0.914 43 H 0.060 0.940 44 H 0.098 0.902 45 H 0.059 0.941 46 H 0.097 0.903 47 H 0.084 0.916 48 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.083 -6.316 -19.509 21.695 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C 0.173 3.827 3 H 0.083 0.917 4 C -0.567 4.567 5 H 0.077 0.923 6 C -0.136 4.136 7 N -0.525 5.525 8 Si 0.727 3.273 9 H -0.202 1.202 10 H -0.211 1.211 11 H -0.202 1.202 12 N -0.333 5.333 13 C -0.061 4.061 14 C 0.398 3.602 15 O -0.457 6.457 16 N -0.324 5.324 17 C 0.127 3.873 18 C -0.147 4.147 19 C -0.103 4.103 20 C -0.158 4.158 21 C -0.073 4.073 22 Cl -0.034 7.034 23 C -0.054 4.054 24 N -0.213 5.213 25 C -0.118 4.118 26 C -0.011 4.011 27 O -0.303 6.303 28 C -0.010 4.010 29 C -0.128 4.128 30 H 0.030 0.970 31 H 0.049 0.951 32 H 0.113 0.887 33 H 0.074 0.926 34 H 0.063 0.937 35 H 0.066 0.934 36 H 0.104 0.896 37 H 0.249 0.751 38 H 0.179 0.821 39 H 0.153 0.847 40 H 0.147 0.853 41 H 0.083 0.917 42 H 0.105 0.895 43 H 0.079 0.921 44 H 0.116 0.884 45 H 0.077 0.923 46 H 0.115 0.885 47 H 0.102 0.898 48 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 7.000 -5.807 -18.882 20.958 hybrid contribution 0.682 -0.611 0.296 0.963 sum 7.682 -6.419 -18.586 21.110 Atomic orbital electron populations 1.22104 0.98096 0.99457 1.00863 1.18913 0.90695 0.94308 0.78817 0.91673 1.21285 1.31986 1.13141 0.90294 0.92304 1.24871 0.94888 0.94966 0.98920 1.69861 1.36183 1.22524 1.23944 0.86550 0.79258 0.79562 0.81979 1.20247 1.21145 1.20230 1.47633 1.50226 1.11627 1.23814 1.21570 0.98444 0.83383 1.02704 1.16004 0.79677 0.85078 0.79482 1.90829 1.62548 1.15516 1.76793 1.42940 1.56837 1.13254 1.19392 1.17256 0.90692 0.91080 0.88250 1.21720 1.01567 0.92702 0.98686 1.21060 0.95143 1.00180 0.93939 1.20874 1.01368 0.91857 1.01694 1.21373 0.96709 0.93545 0.95630 1.98319 1.61964 1.77993 1.65098 1.18063 0.99336 0.89351 0.98673 1.59682 1.24329 1.04545 1.32749 1.23063 0.88528 0.97663 1.02571 1.22648 1.01053 0.90196 0.87162 1.87974 1.29992 1.69890 1.42418 1.22630 0.84153 0.93635 1.00621 1.23228 1.02640 0.95133 0.91818 0.96961 0.95148 0.88707 0.92571 0.93729 0.93356 0.89585 0.75052 0.82101 0.84743 0.85252 0.91741 0.89525 0.92135 0.88354 0.92293 0.88467 0.89771 0.91246 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.40 8.97 37.16 0.33 -3.07 16 2 C 0.27 6.75 2.64 -69.08 -0.18 6.57 16 3 H 0.07 1.87 6.90 -51.93 -0.36 1.52 16 4 C -0.53 -13.91 7.99 -34.44 -0.28 -14.19 16 5 H 0.06 1.53 7.33 -52.49 -0.38 1.14 16 6 C 0.07 1.77 5.30 -17.82 -0.09 1.67 16 7 N -0.89 -24.58 11.32 55.43 0.63 -23.96 16 8 Si 0.90 20.70 29.54 -169.99 -5.02 15.68 16 9 H -0.28 -6.43 7.11 56.52 0.40 -6.02 16 10 H -0.29 -6.55 7.11 56.52 0.40 -6.15 16 11 H -0.28 -6.21 7.11 56.52 0.40 -5.81 16 12 N -0.60 -12.34 2.75 -181.00 -0.50 -12.84 16 13 C 0.08 1.34 9.25 59.85 0.55 1.89 16 14 C 0.70 14.10 8.09 -86.91 -0.70 13.40 16 15 O -0.58 -13.62 12.84 5.29 0.07 -13.55 16 16 N -0.68 -10.82 5.16 -14.07 -0.07 -10.89 16 17 C 0.23 3.43 6.45 -83.43 -0.54 2.89 16 18 C -0.13 -1.89 8.72 -39.42 -0.34 -2.24 16 19 C -0.08 -1.01 10.04 -39.57 -0.40 -1.41 16 20 C -0.14 -1.54 9.82 -39.54 -0.39 -1.93 16 21 C -0.04 -0.52 5.97 -39.34 -0.23 -0.76 16 22 Cl -0.06 -0.67 22.68 -51.86 -1.18 -1.84 16 23 C 0.04 0.58 4.76 -83.49 -0.40 0.18 16 24 N -0.49 -5.72 4.03 -170.58 -0.69 -6.40 16 25 C 0.01 0.09 5.31 -3.71 -0.02 0.07 16 26 C 0.07 0.67 7.01 37.21 0.26 0.93 16 27 O -0.38 -4.22 10.83 -35.23 -0.38 -4.60 16 28 C 0.07 0.61 7.01 37.21 0.26 0.87 16 29 C 0.00 -0.02 5.27 -3.71 -0.02 -0.03 16 30 H 0.01 0.25 8.14 -51.93 -0.42 -0.17 16 31 H 0.03 0.65 7.67 -51.93 -0.40 0.25 16 32 H 0.09 2.42 6.07 -51.93 -0.32 2.11 16 33 H 0.26 7.00 8.31 -40.82 -0.34 6.66 16 34 H 0.04 0.64 8.14 -51.93 -0.42 0.21 16 35 H 0.05 0.64 6.29 -51.93 -0.33 0.31 16 36 H 0.09 1.48 7.02 -51.93 -0.36 1.11 16 37 H 0.41 5.73 5.96 -40.82 -0.24 5.49 16 38 H 0.16 2.81 5.78 -52.48 -0.30 2.50 16 39 H 0.13 1.29 8.06 -52.49 -0.42 0.86 16 40 H 0.13 1.17 8.06 -52.49 -0.42 0.75 16 41 H 0.06 0.73 5.15 -51.93 -0.27 0.47 16 42 H 0.09 1.05 8.14 -51.93 -0.42 0.63 16 43 H 0.06 0.61 8.14 -51.93 -0.42 0.18 16 44 H 0.10 0.83 8.14 -51.93 -0.42 0.41 16 45 H 0.06 0.52 8.14 -51.93 -0.42 0.09 16 46 H 0.10 0.71 8.14 -51.93 -0.42 0.28 16 47 H 0.08 0.80 8.14 -51.93 -0.42 0.38 16 48 H 0.07 0.73 4.75 -51.93 -0.25 0.48 16 LS Contribution 385.52 15.07 5.81 5.81 Total: -1.00 -30.00 385.52 -10.09 -40.09 By element: Atomic # 1 Polarization: 14.25 SS G_CDS: -6.57 Total: 7.68 kcal Atomic # 6 Polarization: 7.03 SS G_CDS: -2.19 Total: 4.84 kcal Atomic # 7 Polarization: -53.47 SS G_CDS: -0.63 Total: -54.10 kcal Atomic # 8 Polarization: -17.84 SS G_CDS: -0.31 Total: -18.15 kcal Atomic # 14 Polarization: 20.70 SS G_CDS: -5.02 Total: 15.68 kcal Atomic # 17 Polarization: -0.67 SS G_CDS: -1.18 Total: -1.84 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -30.00 -10.09 -40.09 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000072314427.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.512 kcal (2) G-P(sol) polarization free energy of solvation -29.998 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.486 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.087 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.085 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.573 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds