Wall clock time and date at job start Tue Mar 31 2020 06:27:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52991 * 1 3 3 O 1.42902 * 109.47348 * 2 1 4 4 C 1.35965 * 117.00608 * 180.02562 * 3 2 1 5 5 C 1.38727 * 119.98658 * 179.97438 * 4 3 2 6 6 C 1.38081 * 120.01877 * 180.02562 * 5 4 3 7 7 C 1.38879 * 119.97993 * 0.02562 * 6 5 4 8 8 N 1.40004 * 120.01194 * 179.97438 * 7 6 5 9 9 C 1.46498 * 119.99613 * 188.01858 * 8 7 6 10 10 C 1.50695 * 109.47810 * 282.74403 * 9 8 7 11 11 H 1.07998 * 119.99562 * 359.97438 * 10 9 8 12 12 C 1.37878 * 120.00389 * 180.02562 * 10 9 8 13 13 N 1.31511 * 119.99797 * 179.97438 * 12 10 9 14 14 Si 1.86797 * 119.99945 * 359.97438 * 12 10 9 15 15 H 1.48504 * 109.47338 * 89.99917 * 14 12 10 16 16 H 1.48497 * 109.47405 * 210.00038 * 14 12 10 17 17 H 1.48504 * 109.46959 * 330.00408 * 14 12 10 18 18 C 1.34770 * 120.00385 * 8.02838 * 8 7 6 19 19 O 1.21551 * 120.00067 * 7.34378 * 18 8 7 20 20 C 1.48023 * 120.00304 * 187.07280 * 18 8 7 21 21 C 1.39585 * 119.97323 * 326.28285 * 20 18 8 22 22 C 1.37762 * 120.03112 * 179.75884 * 21 20 18 23 23 C 1.39815 * 119.96798 * 0.51767 * 22 21 20 24 24 C 1.47377 * 120.02548 * 179.71908 * 23 22 21 25 25 C 1.50705 * 120.00019 * 185.30571 * 24 23 22 26 26 O 1.21226 * 120.00101 * 5.30455 * 24 23 22 27 27 C 1.39814 * 119.94829 * 359.73288 * 23 22 21 28 28 C 1.37764 * 119.97243 * 0.02562 * 27 23 22 29 29 C 1.38870 * 119.96646 * 0.25171 * 7 6 5 30 30 C 1.38081 * 119.98240 * 359.49175 * 29 7 6 31 31 H 1.09001 * 109.47254 * 300.00003 * 1 2 3 32 32 H 1.08997 * 109.47239 * 60.00013 * 1 2 3 33 33 H 1.09004 * 109.46981 * 180.02562 * 1 2 3 34 34 H 1.09001 * 109.47254 * 239.99997 * 2 1 3 35 35 H 1.09001 * 109.47554 * 119.99313 * 2 1 3 36 36 H 1.08001 * 119.98823 * 359.97438 * 5 4 3 37 37 H 1.07996 * 120.00668 * 179.97438 * 6 5 4 38 38 H 1.09000 * 109.46931 * 42.74707 * 9 8 7 39 39 H 1.09006 * 109.46716 * 162.73978 * 9 8 7 40 40 H 0.97008 * 119.99438 * 179.97438 * 13 12 10 41 41 H 1.08001 * 119.98483 * 0.02562 * 21 20 18 42 42 H 1.08002 * 120.01395 * 180.23230 * 22 21 20 43 43 H 1.08996 * 109.47004 * 354.95063 * 25 24 23 44 44 H 1.08998 * 109.47045 * 114.95193 * 25 24 23 45 45 H 1.08998 * 109.46891 * 234.95530 * 25 24 23 46 46 H 1.08000 * 120.01638 * 179.97438 * 27 23 22 47 47 H 1.08002 * 119.98270 * 179.97438 * 28 27 23 48 48 H 1.08003 * 120.01093 * 179.72370 * 29 7 6 49 49 H 1.07998 * 119.99371 * 180.25318 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.3542 1.5255 -0.0005 5 6 3.8841 2.8076 -0.0011 6 6 5.2529 2.9894 -0.0022 7 6 6.0992 1.8882 -0.0033 8 7 7.4871 2.0718 -0.0049 9 6 8.3777 0.9223 -0.1830 10 6 8.4614 0.1469 1.1065 11 1 7.9069 0.4776 1.9723 12 6 9.2465 -0.9840 1.1813 13 7 9.3199 -1.6603 2.3068 14 14 10.2061 -1.5555 -0.3161 15 1 11.5501 -0.9239 -0.3134 16 1 10.3532 -3.0326 -0.2756 17 1 9.4778 -1.1641 -1.5497 18 6 8.0039 3.3058 0.1575 19 8 7.2756 4.2376 0.4381 20 6 9.4593 3.5254 0.0002 21 6 10.3599 2.5281 0.3781 22 6 11.7144 2.7292 0.2275 23 6 12.1874 3.9372 -0.2939 24 6 13.6365 4.1561 -0.4497 25 6 14.1517 5.4994 -0.8983 26 8 14.4140 3.2556 -0.2170 27 6 11.2846 4.9374 -0.6671 28 6 9.9303 4.7319 -0.5203 29 6 5.5680 0.6052 -0.0085 30 6 4.1990 0.4250 -0.0021 31 1 -0.3634 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3633 -1.0277 0.0005 34 1 1.8933 -0.5138 -0.8900 35 1 1.8933 -0.5137 0.8900 36 1 3.2257 3.6638 -0.0015 37 1 5.6651 3.9876 -0.0031 38 1 7.9859 0.2777 -0.9698 39 1 9.3717 1.2725 -0.4616 40 1 9.8720 -2.4562 2.3592 41 1 9.9944 1.5966 0.7846 42 1 12.4108 1.9559 0.5165 43 1 13.3105 6.1477 -1.1437 44 1 14.7363 5.9505 -0.0966 45 1 14.7808 5.3715 -1.7792 46 1 11.6488 5.8711 -1.0697 47 1 9.2328 5.5046 -0.8081 48 1 6.2255 -0.2517 -0.0138 49 1 3.7857 -0.5727 -0.0020 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000076590439.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:27:24 Heat of formation + Delta-G solvation = -15.774362 kcal Electronic energy + Delta-G solvation = -32626.613336 eV Core-core repulsion = 28292.960454 eV Total energy + Delta-G solvation = -4333.652883 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 367.162 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -40.81106 -39.86577 -39.32860 -37.90445 -36.86514 -35.43915 -32.84892 -32.32199 -31.63988 -30.97588 -30.52499 -29.81118 -28.60497 -27.77802 -24.63123 -23.97720 -23.06062 -22.58779 -21.77024 -21.31327 -20.04261 -19.50881 -17.95328 -17.31736 -17.18967 -16.87737 -16.51634 -15.95574 -15.59117 -15.24369 -15.11526 -14.99852 -14.77148 -14.62255 -14.15959 -13.87188 -13.75388 -13.49311 -13.27318 -13.16937 -13.07015 -12.79523 -12.70356 -12.67806 -12.46743 -12.34367 -12.26816 -12.11818 -11.86285 -11.62628 -11.40423 -11.31794 -10.98552 -10.82670 -10.47728 -10.44773 -10.39856 -9.88866 -9.77509 -9.20006 -9.07883 -8.97742 -8.86708 -8.61998 -8.51495 -7.00749 -6.44487 -4.50212 0.44527 1.47169 1.77126 1.83283 2.26085 3.04073 3.11976 3.14254 3.15671 3.33722 3.48242 3.90320 3.96936 4.06406 4.34189 4.69862 4.74900 4.83841 4.87435 4.90316 4.96752 5.01883 5.20384 5.21743 5.31121 5.35300 5.37354 5.46654 5.47635 5.51168 5.71753 5.72666 5.76756 5.85589 5.90161 5.97459 5.98914 6.11170 6.17134 6.23708 6.39034 6.48570 6.51468 6.54510 6.58574 6.82654 6.84327 6.95543 6.98588 7.11884 7.43688 7.46202 7.76099 7.79905 8.14493 8.46897 8.65355 9.10199 10.66256 Molecular weight = 367.16amu Principal moments of inertia in cm(-1) A = 0.011132 B = 0.002825 C = 0.002327 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2514.679480 B = 9909.772476 C =12030.235729 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.054 3.946 3 O -0.322 6.322 4 C 0.093 3.907 5 C -0.138 4.138 6 C -0.129 4.129 7 C 0.132 3.868 8 N -0.517 5.517 9 C 0.171 3.829 10 C -0.551 4.551 11 H 0.087 0.913 12 C 0.087 3.913 13 N -0.872 5.872 14 Si 0.854 3.146 15 H -0.264 1.264 16 H -0.277 1.277 17 H -0.260 1.260 18 C 0.556 3.444 19 O -0.533 6.533 20 C -0.097 4.097 21 C -0.108 4.108 22 C -0.074 4.074 23 C -0.157 4.157 24 C 0.394 3.606 25 C -0.201 4.201 26 O -0.457 6.457 27 C -0.095 4.095 28 C -0.081 4.081 29 C -0.095 4.095 30 C -0.189 4.189 31 H 0.064 0.936 32 H 0.063 0.937 33 H 0.074 0.926 34 H 0.059 0.941 35 H 0.060 0.940 36 H 0.125 0.875 37 H 0.176 0.824 38 H 0.039 0.961 39 H 0.065 0.935 40 H 0.272 0.728 41 H 0.192 0.808 42 H 0.137 0.863 43 H 0.085 0.915 44 H 0.095 0.905 45 H 0.092 0.908 46 H 0.136 0.864 47 H 0.136 0.864 48 H 0.147 0.853 49 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.107 8.736 -8.157 12.350 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.021 4.021 3 O -0.237 6.237 4 C 0.048 3.952 5 C -0.158 4.158 6 C -0.148 4.148 7 C 0.038 3.962 8 N -0.236 5.236 9 C 0.051 3.949 10 C -0.589 4.589 11 H 0.105 0.895 12 C -0.120 4.120 13 N -0.507 5.507 14 Si 0.679 3.321 15 H -0.189 1.189 16 H -0.202 1.202 17 H -0.184 1.184 18 C 0.346 3.654 19 O -0.413 6.413 20 C -0.101 4.101 21 C -0.125 4.125 22 C -0.092 4.092 23 C -0.159 4.159 24 C 0.272 3.728 25 C -0.258 4.258 26 O -0.333 6.333 27 C -0.113 4.113 28 C -0.099 4.099 29 C -0.115 4.115 30 C -0.209 4.209 31 H 0.083 0.917 32 H 0.082 0.918 33 H 0.093 0.907 34 H 0.077 0.923 35 H 0.078 0.922 36 H 0.143 0.857 37 H 0.193 0.807 38 H 0.057 0.943 39 H 0.082 0.918 40 H 0.082 0.918 41 H 0.208 0.792 42 H 0.155 0.845 43 H 0.104 0.896 44 H 0.113 0.887 45 H 0.110 0.890 46 H 0.154 0.846 47 H 0.154 0.846 48 H 0.165 0.835 49 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -3.062 8.685 -7.793 12.063 hybrid contribution 0.585 -0.929 -0.564 1.235 sum -2.476 7.755 -8.357 11.667 Atomic orbital electron populations 1.21756 0.93237 1.02510 1.03228 1.22688 0.95362 0.82706 1.01364 1.86015 1.19617 1.28537 1.89536 1.18984 0.81722 0.94356 1.00168 1.20289 0.94744 0.94243 1.06480 1.22224 0.91595 1.01271 0.99704 1.17829 0.82353 0.94010 1.02051 1.45426 1.04863 1.08358 1.64932 1.20904 0.90799 0.84061 0.99107 1.21216 1.30767 1.10087 0.96817 0.89547 1.24845 0.95760 0.95622 0.95764 1.69866 1.38172 1.17352 1.25318 0.87162 0.81636 0.79494 0.83769 1.18886 1.20239 1.18423 1.18407 0.87668 0.82227 0.77054 1.90448 1.59649 1.42874 1.48361 1.20103 0.93022 0.95579 1.01351 1.22990 0.92555 1.01053 0.95890 1.21497 0.95850 0.96053 0.95840 1.20691 0.94869 0.96220 1.04081 1.22606 0.88006 0.89433 0.72748 1.22239 1.03434 0.96281 1.03834 1.90540 1.59033 1.45191 1.38500 1.21304 0.92476 0.98336 0.99177 1.21116 0.95460 0.95828 0.97542 1.21020 0.94586 0.96726 0.99141 1.20984 0.93629 0.97646 1.08608 0.91692 0.91765 0.90675 0.92320 0.92160 0.85698 0.80747 0.94338 0.91820 0.91807 0.79167 0.84483 0.89649 0.88698 0.88978 0.84592 0.84612 0.83519 0.85752 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.32 10.28 37.15 0.38 -0.94 16 2 C 0.05 0.63 5.46 37.15 0.20 0.83 16 3 O -0.32 -4.87 10.14 -19.63 -0.20 -5.07 16 4 C 0.09 1.56 6.69 -39.22 -0.26 1.30 16 5 C -0.14 -2.36 9.98 -39.46 -0.39 -2.75 16 6 C -0.13 -2.41 8.95 -39.40 -0.35 -2.76 16 7 C 0.13 2.65 6.41 -83.65 -0.54 2.12 16 8 N -0.52 -10.59 2.73 -115.69 -0.32 -10.91 16 9 C 0.17 3.60 3.11 -5.20 -0.02 3.58 16 10 C -0.55 -13.43 6.88 -34.44 -0.24 -13.67 16 11 H 0.09 2.42 8.06 -52.49 -0.42 2.00 16 12 C 0.09 2.17 5.45 -17.82 -0.10 2.07 16 13 N -0.87 -23.68 13.96 55.43 0.77 -22.91 16 14 Si 0.85 18.40 27.47 -169.99 -4.67 13.73 16 15 H -0.26 -5.58 7.11 56.52 0.40 -5.18 16 16 H -0.28 -6.05 7.11 56.52 0.40 -5.65 16 17 H -0.26 -5.32 6.54 56.52 0.37 -4.95 16 18 C 0.56 10.93 7.32 -12.25 -0.09 10.84 16 19 O -0.53 -10.86 13.33 5.32 0.07 -10.79 16 20 C -0.10 -1.70 5.53 -104.88 -0.58 -2.28 16 21 C -0.11 -1.96 7.41 -39.25 -0.29 -2.25 16 22 C -0.07 -1.23 9.58 -39.17 -0.38 -1.61 16 23 C -0.16 -2.18 5.87 -105.00 -0.62 -2.80 16 24 C 0.39 5.01 7.22 -30.59 -0.22 4.79 16 25 C -0.20 -1.58 10.19 36.01 0.37 -1.21 16 26 O -0.46 -7.46 17.09 5.60 0.10 -7.37 16 27 C -0.09 -1.12 9.43 -39.17 -0.37 -1.49 16 28 C -0.08 -1.13 9.58 -39.25 -0.38 -1.51 16 29 C -0.09 -1.83 8.89 -39.41 -0.35 -2.18 16 30 C -0.19 -3.22 9.03 -39.46 -0.36 -3.58 16 31 H 0.06 0.58 8.14 -51.93 -0.42 0.15 16 32 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 33 H 0.07 0.51 8.14 -51.93 -0.42 0.09 16 34 H 0.06 0.63 7.66 -51.93 -0.40 0.23 16 35 H 0.06 0.68 7.66 -51.93 -0.40 0.29 16 36 H 0.13 1.87 8.06 -52.49 -0.42 1.45 16 37 H 0.18 3.34 4.77 -54.89 -0.26 3.07 16 38 H 0.04 0.81 6.39 -51.93 -0.33 0.47 16 39 H 0.06 1.29 3.28 -52.13 -0.17 1.12 16 40 H 0.27 6.93 8.31 -40.82 -0.34 6.59 16 41 H 0.19 3.95 3.73 -52.49 -0.20 3.75 16 42 H 0.14 2.32 7.65 -52.49 -0.40 1.92 16 43 H 0.08 0.49 5.62 -51.93 -0.29 0.20 16 44 H 0.09 0.65 8.14 -51.93 -0.42 0.23 16 45 H 0.09 0.63 8.14 -51.93 -0.42 0.21 16 46 H 0.14 1.06 5.93 -52.49 -0.31 0.75 16 47 H 0.14 1.68 7.97 -52.49 -0.42 1.27 16 48 H 0.15 2.98 5.94 -52.48 -0.31 2.67 16 49 H 0.12 1.82 6.29 -52.49 -0.33 1.49 16 LS Contribution 396.75 15.07 5.98 5.98 Total: -1.00 -29.74 396.75 -8.78 -38.52 By element: Atomic # 1 Polarization: 18.24 SS G_CDS: -5.95 Total: 12.30 kcal Atomic # 6 Polarization: -8.92 SS G_CDS: -4.57 Total: -13.49 kcal Atomic # 7 Polarization: -34.27 SS G_CDS: 0.46 Total: -33.81 kcal Atomic # 8 Polarization: -23.19 SS G_CDS: -0.03 Total: -23.22 kcal Atomic # 14 Polarization: 18.40 SS G_CDS: -4.67 Total: 13.73 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -29.74 -8.78 -38.52 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000076590439.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.747 kcal (2) G-P(sol) polarization free energy of solvation -29.741 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.995 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.780 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.521 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.774 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds