Wall clock time and date at job start Tue Mar 31 2020 06:18:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53005 * 109.46938 * 2 1 4 4 C 1.50702 * 109.47438 * 119.99913 * 2 1 3 5 5 N 1.31927 * 119.02192 * 300.00262 * 4 2 1 6 6 C 1.32130 * 121.05796 * 179.97438 * 5 4 2 7 7 C 1.38985 * 119.12736 * 0.02562 * 6 5 4 8 8 Cl 1.73592 * 120.89020 * 179.97438 * 7 6 5 9 9 C 1.39634 * 118.22540 * 0.24814 * 7 6 5 10 10 C 1.48371 * 120.56577 * 179.72385 * 9 7 6 11 11 O 1.21486 * 119.99631 * 353.95027 * 10 9 7 12 12 N 1.34775 * 120.00320 * 173.94299 * 10 9 7 13 13 C 1.46495 * 120.00274 * 183.79717 * 12 10 9 14 14 C 1.50701 * 109.47352 * 94.65483 * 13 12 10 15 15 H 1.08003 * 119.99723 * 0.02562 * 14 13 12 16 16 C 1.37874 * 120.00205 * 180.02562 * 14 13 12 17 17 N 1.31511 * 119.99827 * 0.02562 * 16 14 13 18 18 Si 1.86796 * 120.00052 * 180.02562 * 16 14 13 19 19 H 1.48498 * 109.47064 * 359.97438 * 18 16 14 20 20 H 1.48501 * 109.47494 * 119.99814 * 18 16 14 21 21 H 1.48504 * 109.46842 * 239.99922 * 18 16 14 22 22 C 1.46500 * 119.99704 * 3.79764 * 12 10 9 23 23 C 1.53001 * 109.46903 * 82.34168 * 22 12 10 24 24 H 1.08996 * 110.43929 * 303.35907 * 23 22 12 25 25 C 1.54811 * 110.48689 * 180.67017 * 23 22 12 26 26 C 1.55002 * 102.09348 * 220.44245 * 25 23 22 27 27 O 1.44386 * 103.48960 * 37.02371 * 26 25 23 28 28 C 1.43749 * 106.97151 * 319.94089 * 27 26 25 29 29 N 1.31522 * 119.01318 * 119.97596 * 4 2 1 30 30 H 1.08998 * 109.46993 * 59.99776 * 1 2 3 31 31 H 1.08992 * 109.46973 * 180.02562 * 1 2 3 32 32 H 1.09004 * 109.46799 * 299.99712 * 1 2 3 33 33 H 1.09003 * 109.47245 * 240.00582 * 2 1 3 34 34 H 1.09006 * 109.46957 * 180.02562 * 3 2 1 35 35 H 1.08998 * 109.47461 * 299.99938 * 3 2 1 36 36 H 1.09004 * 109.47140 * 60.00496 * 3 2 1 37 37 H 1.08001 * 120.43959 * 179.97438 * 6 5 4 38 38 H 1.09000 * 109.47327 * 214.65855 * 13 12 10 39 39 H 1.09005 * 109.47062 * 334.66075 * 13 12 10 40 40 H 0.97008 * 120.00288 * 180.02562 * 17 16 14 41 41 H 1.09007 * 109.47161 * 202.33854 * 22 12 10 42 42 H 1.08999 * 109.47558 * 322.34096 * 22 12 10 43 43 H 1.09001 * 110.90797 * 338.63901 * 25 23 22 44 44 H 1.08998 * 110.91182 * 102.24540 * 25 23 22 45 45 H 1.08994 * 110.61726 * 278.52196 * 26 25 23 46 46 H 1.08997 * 110.75464 * 155.58644 * 26 25 23 47 47 H 1.08999 * 109.87704 * 267.08786 * 28 27 26 48 48 H 1.09002 * 109.99946 * 146.00583 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0324 -0.7104 1.2305 5 7 1.7020 -0.2430 2.4191 6 6 2.1196 -0.8345 3.5243 7 6 2.9201 -1.9663 3.4249 8 17 3.4949 -2.7791 4.8470 9 6 3.2544 -2.4289 2.1505 10 6 4.1109 -3.6289 1.9841 11 8 4.6177 -4.1530 2.9559 12 7 4.3267 -4.1377 0.7549 13 6 5.1034 -5.3698 0.5980 14 6 4.1674 -6.5493 0.5369 15 1 3.1006 -6.3963 0.6074 16 6 4.6728 -7.8237 0.3910 17 7 5.9719 -8.0101 0.3056 18 14 3.5126 -9.2857 0.3146 19 1 2.1103 -8.8114 0.4330 20 1 3.6894 -9.9909 -0.9802 21 1 3.8156 -10.2169 1.4309 22 6 3.7846 -3.4584 -0.4245 23 6 4.7190 -2.3167 -0.8299 24 1 4.8608 -1.6272 0.0022 25 6 4.1590 -1.5711 -2.0658 26 6 5.4407 -1.3158 -2.8992 27 8 6.2223 -2.5117 -2.6902 28 6 6.0748 -2.8728 -1.3066 29 7 2.7869 -1.7781 1.0872 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 -0.3633 0.5138 0.8901 33 1 1.8934 -0.5138 -0.8901 34 1 3.1300 1.4426 -0.0005 35 1 1.6767 1.9564 -0.8900 36 1 1.6767 1.9564 0.8901 37 1 1.8434 -0.4431 4.4923 38 1 5.6840 -5.3186 -0.3231 39 1 5.7777 -5.4848 1.4467 40 1 6.3276 -8.9067 0.2026 41 1 3.7011 -4.1690 -1.2468 42 1 2.7990 -3.0556 -0.1909 43 1 3.4573 -2.1995 -2.6142 44 1 3.6912 -0.6310 -1.7739 45 1 5.9723 -0.4400 -2.5272 46 1 5.1975 -1.1960 -3.9549 47 1 6.8822 -2.4335 -0.7208 48 1 6.0882 -3.9576 -1.2010 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000084631218.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:18:59 Heat of formation + Delta-G solvation = -18.406187 kcal Electronic energy + Delta-G solvation = -32921.644428 eV Core-core repulsion = 28617.737323 eV Total energy + Delta-G solvation = -4303.907106 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 367.145 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -41.58213 -39.50503 -38.59732 -36.78187 -35.63542 -35.40415 -34.08601 -32.82938 -31.79148 -31.02568 -29.11463 -27.87427 -27.41876 -25.86838 -25.02718 -24.61773 -23.15074 -22.35652 -21.19889 -20.45676 -19.10210 -18.22966 -17.01952 -16.75767 -16.48611 -16.13177 -15.81079 -15.50349 -15.41142 -15.24100 -14.69688 -14.47351 -14.29892 -14.15360 -14.05872 -13.33033 -13.26966 -13.00345 -12.67253 -12.50008 -12.35958 -12.20792 -12.06015 -11.83344 -11.67315 -11.40974 -11.39242 -11.23812 -11.18159 -11.09241 -11.05914 -11.01425 -10.95102 -10.67054 -10.65059 -10.19746 -10.10915 -9.79843 -9.56996 -9.38355 -9.24508 -8.75388 -8.46765 -7.73404 -6.09043 -4.14412 0.34388 0.59957 1.97345 3.00907 3.27853 3.32670 3.35826 3.40594 3.59316 3.75352 3.81909 4.18781 4.32056 4.43671 4.54850 4.62078 4.71021 4.85243 4.88954 4.98906 5.10527 5.19927 5.24328 5.30728 5.39368 5.40088 5.48917 5.54056 5.58880 5.67760 5.73592 5.81191 5.83728 5.86877 5.97507 6.03508 6.08688 6.13085 6.22879 6.41698 6.48190 6.60371 7.00272 7.11974 7.32822 7.44069 7.71984 7.86057 8.14730 8.21554 8.70585 8.92036 9.50821 10.98853 Molecular weight = 367.14amu Principal moments of inertia in cm(-1) A = 0.007704 B = 0.004403 C = 0.003344 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3633.662263 B = 6357.817797 C = 8370.954130 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.028 4.028 3 C -0.141 4.141 4 C 0.312 3.688 5 N -0.493 5.493 6 C 0.160 3.840 7 C -0.111 4.111 8 Cl 0.000 7.000 9 C 0.155 3.845 10 C 0.547 3.453 11 O -0.506 6.506 12 N -0.566 5.566 13 C 0.240 3.760 14 C -0.530 4.530 15 H 0.058 0.942 16 C 0.064 3.936 17 N -0.890 5.890 18 Si 0.898 3.102 19 H -0.274 1.274 20 H -0.283 1.283 21 H -0.283 1.283 22 C 0.112 3.888 23 C -0.119 4.119 24 H 0.075 0.925 25 C -0.142 4.142 26 C 0.045 3.955 27 O -0.378 6.378 28 C 0.040 3.960 29 N -0.466 5.466 30 H 0.067 0.933 31 H 0.055 0.945 32 H 0.066 0.934 33 H 0.101 0.899 34 H 0.054 0.946 35 H 0.067 0.933 36 H 0.067 0.933 37 H 0.180 0.820 38 H 0.041 0.959 39 H 0.050 0.950 40 H 0.264 0.736 41 H 0.080 0.920 42 H 0.106 0.894 43 H 0.080 0.920 44 H 0.076 0.924 45 H 0.052 0.948 46 H 0.087 0.913 47 H 0.049 0.951 48 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.800 20.359 -0.874 22.197 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C -0.048 4.048 3 C -0.199 4.199 4 C 0.045 3.955 5 N -0.207 5.207 6 C -0.008 4.008 7 C -0.143 4.143 8 Cl 0.029 6.971 9 C 0.007 3.993 10 C 0.330 3.670 11 O -0.381 6.381 12 N -0.296 5.296 13 C 0.122 3.878 14 C -0.569 4.569 15 H 0.077 0.923 16 C -0.138 4.138 17 N -0.529 5.529 18 Si 0.725 3.275 19 H -0.198 1.198 20 H -0.209 1.209 21 H -0.209 1.209 22 C -0.012 4.012 23 C -0.139 4.139 24 H 0.093 0.907 25 C -0.180 4.180 26 C -0.032 4.032 27 O -0.297 6.297 28 C -0.036 4.036 29 N -0.183 5.183 30 H 0.086 0.914 31 H 0.075 0.925 32 H 0.085 0.915 33 H 0.120 0.880 34 H 0.073 0.927 35 H 0.086 0.914 36 H 0.086 0.914 37 H 0.197 0.803 38 H 0.058 0.942 39 H 0.068 0.932 40 H 0.074 0.926 41 H 0.098 0.902 42 H 0.124 0.876 43 H 0.098 0.902 44 H 0.095 0.905 45 H 0.070 0.930 46 H 0.106 0.894 47 H 0.067 0.933 48 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -8.479 20.116 -1.221 21.864 hybrid contribution -0.345 -1.249 1.110 1.707 sum -8.824 18.867 -0.111 20.829 Atomic orbital electron populations 1.21808 0.92901 1.02424 1.02876 1.20068 0.96714 0.95855 0.92197 1.21806 1.01108 0.94086 1.02927 1.23444 0.89993 0.88828 0.93206 1.68149 1.22222 1.31843 0.98469 1.23336 0.89979 0.89033 0.98466 1.22895 1.01792 0.98037 0.91598 1.98442 1.86751 1.77504 1.34438 1.22244 0.93976 0.95403 0.87713 1.17613 0.82080 0.82420 0.84914 1.90856 1.49419 1.59708 1.38097 1.48192 1.51193 1.26007 1.04198 1.19563 0.91228 0.78490 0.98525 1.21406 0.93437 0.91079 1.50958 0.92328 1.24908 0.95177 0.98827 0.94930 1.69934 1.11164 1.22377 1.49412 0.86448 0.80959 0.82412 0.77647 1.19825 1.20860 1.20858 1.22024 0.97888 0.92858 0.88402 1.22805 0.95443 0.97886 0.97750 0.90675 1.23100 0.98191 1.00682 0.96051 1.23503 0.90798 0.88601 1.00291 1.88885 1.70622 1.43043 1.27185 1.23559 0.95818 1.02527 0.81696 1.69079 1.10675 1.07267 1.31253 0.91446 0.92545 0.91480 0.88045 0.92651 0.91447 0.91442 0.80268 0.94153 0.93187 0.92639 0.90205 0.87640 0.90174 0.90515 0.92952 0.89436 0.93261 0.87974 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.10 9.09 37.16 0.34 -0.77 16 2 C -0.03 -0.25 3.25 -91.77 -0.30 -0.55 16 3 C -0.14 -1.04 9.09 37.16 0.34 -0.70 16 4 C 0.31 3.70 6.34 -157.31 -1.00 2.70 16 5 N -0.49 -5.72 9.78 -10.70 -0.10 -5.82 16 6 C 0.16 1.83 11.14 -17.15 -0.19 1.63 16 7 C -0.11 -1.60 6.40 -38.78 -0.25 -1.85 16 8 Cl 0.00 -0.01 26.27 -51.86 -1.36 -1.37 16 9 C 0.16 2.57 6.52 -82.61 -0.54 2.03 16 10 C 0.55 11.27 7.59 -12.09 -0.09 11.18 16 11 O -0.51 -11.91 13.67 5.38 0.07 -11.84 16 12 N -0.57 -11.76 2.31 -175.98 -0.41 -12.16 16 13 C 0.24 6.04 4.93 -5.20 -0.03 6.01 16 14 C -0.53 -14.59 9.38 -34.44 -0.32 -14.91 16 15 H 0.06 1.62 7.81 -52.48 -0.41 1.21 16 16 C 0.06 1.80 5.46 -17.82 -0.10 1.70 16 17 N -0.89 -25.92 13.29 55.43 0.74 -25.19 16 18 Si 0.90 21.58 29.54 -169.99 -5.02 16.56 16 19 H -0.27 -6.50 7.11 56.52 0.40 -6.10 16 20 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 21 H -0.28 -6.80 7.11 56.52 0.40 -6.40 16 22 C 0.11 1.89 4.24 -4.04 -0.02 1.87 16 23 C -0.12 -1.72 2.55 -89.09 -0.23 -1.95 16 24 H 0.07 1.12 6.99 -51.93 -0.36 0.76 16 25 C -0.14 -1.59 6.58 -24.72 -0.16 -1.75 16 26 C 0.04 0.53 7.72 38.21 0.29 0.82 16 27 O -0.38 -6.16 11.52 -35.23 -0.41 -6.56 16 28 C 0.04 0.67 7.18 37.73 0.27 0.94 16 29 N -0.47 -6.55 4.57 -7.31 -0.03 -6.58 16 30 H 0.07 0.40 8.14 -51.93 -0.42 -0.02 16 31 H 0.06 0.49 8.14 -51.93 -0.42 0.07 16 32 H 0.07 0.55 8.01 -51.93 -0.42 0.13 16 33 H 0.10 0.85 6.52 -51.93 -0.34 0.51 16 34 H 0.05 0.44 8.14 -51.93 -0.42 0.01 16 35 H 0.07 0.38 8.14 -51.93 -0.42 -0.05 16 36 H 0.07 0.53 8.01 -51.93 -0.42 0.11 16 37 H 0.18 1.42 8.06 -52.49 -0.42 0.99 16 38 H 0.04 1.03 5.68 -51.93 -0.29 0.74 16 39 H 0.05 1.42 7.24 -51.93 -0.38 1.04 16 40 H 0.26 7.27 8.31 -40.82 -0.34 6.93 16 41 H 0.08 1.43 8.02 -51.93 -0.42 1.01 16 42 H 0.11 1.66 5.22 -52.05 -0.27 1.39 16 43 H 0.08 0.87 7.87 -51.93 -0.41 0.47 16 44 H 0.08 0.69 6.72 -51.93 -0.35 0.34 16 45 H 0.05 0.56 8.14 -51.93 -0.42 0.14 16 46 H 0.09 0.86 8.14 -51.93 -0.42 0.44 16 47 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 48 H 0.10 1.97 4.87 -51.93 -0.25 1.72 16 LS Contribution 396.03 15.07 5.97 5.97 Total: -1.00 -31.65 396.03 -9.36 -41.02 By element: Atomic # 1 Polarization: 6.40 SS G_CDS: -6.83 Total: -0.43 kcal Atomic # 6 Polarization: 8.39 SS G_CDS: -1.98 Total: 6.41 kcal Atomic # 7 Polarization: -49.94 SS G_CDS: 0.19 Total: -49.75 kcal Atomic # 8 Polarization: -18.07 SS G_CDS: -0.33 Total: -18.40 kcal Atomic # 14 Polarization: 21.58 SS G_CDS: -5.02 Total: 16.56 kcal Atomic # 17 Polarization: -0.01 SS G_CDS: -1.36 Total: -1.37 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -31.65 -9.36 -41.02 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000084631218.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.609 kcal (2) G-P(sol) polarization free energy of solvation -31.654 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.044 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.362 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.016 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.406 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds