Wall clock time and date at job start Tue Mar 31 2020 05:22:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35899 * 116.99984 * 2 1 4 4 C 1.38767 * 120.04684 * 359.72659 * 3 2 1 5 5 C 1.38134 * 119.96816 * 180.27477 * 4 3 2 6 6 C 1.38267 * 120.06738 * 359.97438 * 5 4 3 7 7 C 1.38363 * 120.10143 * 0.02562 * 6 5 4 8 8 Cl 1.73598 * 119.98974 * 179.97438 * 7 6 5 9 9 C 1.38280 * 120.02730 * 359.97438 * 7 6 5 10 10 C 1.50698 * 120.03698 * 180.02562 * 9 7 6 11 11 C 1.50704 * 109.46988 * 269.98254 * 10 9 7 12 12 O 1.21279 * 120.00179 * 359.97438 * 11 10 9 13 13 N 1.34784 * 119.99865 * 179.97438 * 11 10 9 14 14 C 1.46498 * 119.99930 * 179.97438 * 13 11 10 15 15 C 1.53000 * 109.47253 * 180.02562 * 14 13 11 16 16 C 1.53046 * 109.45640 * 295.02647 * 15 14 13 17 17 C 1.53189 * 109.30873 * 178.60036 * 16 15 14 18 18 N 1.46931 * 108.76920 * 54.65735 * 17 16 15 19 19 C 1.36928 * 120.62970 * 126.40264 * 18 17 16 20 20 H 1.08002 * 120.00548 * 331.82203 * 19 18 17 21 21 C 1.38816 * 119.99895 * 151.82537 * 19 18 17 22 22 N 1.31615 * 119.99940 * 343.07897 * 21 19 18 23 23 Si 1.86802 * 120.00011 * 163.07777 * 21 19 18 24 24 H 1.48498 * 109.47147 * 60.00375 * 23 21 19 25 25 H 1.48497 * 109.46920 * 180.02562 * 23 21 19 26 26 H 1.48499 * 109.47097 * 299.99994 * 23 21 19 27 27 C 1.46924 * 118.73541 * 306.38468 * 18 17 16 28 28 C 1.53040 * 109.46050 * 174.97319 * 15 14 13 29 29 H 1.08997 * 109.47490 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47245 * 300.00231 * 1 2 3 31 31 H 1.09005 * 109.47429 * 59.99480 * 1 2 3 32 32 H 1.07996 * 120.01854 * 0.29531 * 4 3 2 33 33 H 1.07992 * 119.96497 * 179.97438 * 5 4 3 34 34 H 1.07999 * 119.95376 * 179.97438 * 6 5 4 35 35 H 1.08997 * 109.47405 * 29.97556 * 10 9 7 36 36 H 1.08998 * 109.47912 * 149.98316 * 10 9 7 37 37 H 0.96996 * 120.00314 * 359.97438 * 13 11 10 38 38 H 1.09004 * 109.47164 * 300.00030 * 14 13 11 39 39 H 1.09004 * 109.47350 * 60.00141 * 14 13 11 40 40 H 1.08998 * 109.46113 * 54.99898 * 15 14 13 41 41 H 1.08993 * 109.50030 * 298.56422 * 16 15 14 42 42 H 1.09000 * 109.49450 * 58.66615 * 16 15 14 43 43 H 1.09008 * 109.59826 * 294.86643 * 17 16 15 44 44 H 1.09002 * 109.70306 * 174.50835 * 17 16 15 45 45 H 0.97000 * 120.00353 * 179.97438 * 22 21 19 46 46 H 1.09002 * 109.58442 * 293.81504 * 27 18 17 47 47 H 1.09000 * 109.70007 * 173.46414 * 27 18 17 48 48 H 1.08999 * 109.50003 * 301.33451 * 28 15 14 49 49 H 1.09002 * 109.49633 * 61.43534 * 28 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 1.2911 2.3753 -0.0057 5 6 1.9199 3.6052 -0.0115 6 6 3.3007 3.6773 -0.0110 7 6 4.0561 2.5180 -0.0052 8 17 5.7896 2.6119 -0.0053 9 6 3.4309 1.2847 0.0005 10 6 4.2534 0.0220 0.0073 11 6 4.5281 -0.4062 -1.4113 12 8 4.0979 0.2492 -2.3366 13 7 5.2519 -1.5175 -1.6516 14 6 5.5185 -1.9341 -3.0306 15 6 6.3536 -3.2160 -3.0237 16 6 7.7275 -2.9261 -2.4148 17 6 8.5481 -4.2191 -2.3775 18 7 8.5963 -4.7877 -3.7315 19 6 9.7954 -5.0938 -4.3173 20 1 10.6853 -4.5460 -4.0445 21 6 9.8674 -6.1084 -5.2620 22 7 8.8930 -6.9878 -5.3588 23 14 11.3473 -6.2256 -6.3959 24 1 12.5791 -6.4020 -5.5854 25 1 11.1826 -7.3872 -7.3062 26 1 11.4564 -4.9805 -7.1977 27 6 7.3332 -5.0218 -4.4446 28 6 6.5260 -3.7199 -4.4585 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3634 0.5139 0.8899 31 1 -0.3634 0.5139 -0.8900 32 1 0.2126 2.3200 -0.0054 33 1 1.3325 4.5113 -0.0163 34 1 3.7905 4.6398 -0.0159 35 1 5.1973 0.2059 0.5204 36 1 3.7059 -0.7656 0.5249 37 1 5.5963 -2.0415 -0.9115 38 1 4.5744 -2.1187 -3.5433 39 1 6.0654 -1.1464 -3.5488 40 1 5.8465 -3.9766 -2.4301 41 1 8.2453 -2.1838 -3.0221 42 1 7.6031 -2.5450 -1.4012 43 1 8.0782 -4.9309 -1.6987 44 1 9.5603 -4.0023 -2.0360 45 1 8.9430 -7.6966 -6.0191 46 1 6.7643 -5.7991 -3.9345 47 1 7.5415 -5.3336 -5.4681 48 1 5.5464 -3.9039 -4.8996 49 1 7.0553 -2.9700 -5.0463 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000097379144.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:22:55 Heat of formation + Delta-G solvation = -44.283085 kcal Electronic energy + Delta-G solvation = -30481.873224 eV Core-core repulsion = 26242.269922 eV Total energy + Delta-G solvation = -4239.603301 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 366.150 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -40.82837 -39.46464 -38.06784 -37.68551 -36.52299 -34.88534 -33.29461 -32.74023 -30.78800 -30.37253 -29.73282 -28.51997 -27.56568 -26.35552 -23.96065 -22.58365 -22.48256 -22.06718 -20.98599 -20.32399 -19.07081 -18.48685 -17.15823 -17.00612 -16.63051 -16.37589 -16.02067 -15.54366 -15.29911 -15.23883 -14.79724 -14.39029 -14.02491 -13.92905 -13.66259 -13.57910 -13.45580 -13.14734 -13.13113 -12.59655 -12.57137 -12.29812 -12.24893 -12.14970 -11.92356 -11.67688 -11.55909 -11.29950 -11.22180 -11.02085 -10.95739 -10.69722 -10.47470 -10.22856 -10.19235 -9.96949 -9.82136 -9.51504 -9.42075 -9.03003 -8.89019 -8.56208 -8.44286 -6.64417 -5.76776 -3.19086 0.75698 0.98158 1.77308 2.74859 2.95256 3.11205 3.39980 3.45646 3.47222 3.48642 4.22885 4.47190 4.51726 4.54893 4.66604 4.77258 4.84372 4.94049 4.98680 5.10841 5.13154 5.19011 5.21049 5.28774 5.41467 5.44744 5.55654 5.64371 5.79675 5.87944 5.92079 5.95804 5.99748 6.09599 6.16854 6.19743 6.35598 6.48269 6.54270 6.63408 6.73148 6.80171 6.84722 6.93815 7.01293 7.39505 7.60842 7.68243 7.81414 8.32765 8.47724 9.23902 9.87506 10.44404 11.31717 Molecular weight = 366.15amu Principal moments of inertia in cm(-1) A = 0.018345 B = 0.001894 C = 0.001779 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1525.968238 B =14779.799554 C =15731.730884 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.309 6.309 3 C 0.154 3.846 4 C -0.205 4.205 5 C -0.069 4.069 6 C -0.148 4.148 7 C 0.014 3.986 8 Cl -0.056 7.056 9 C -0.087 4.087 10 C -0.101 4.101 11 C 0.519 3.481 12 O -0.536 6.536 13 N -0.726 5.726 14 C 0.125 3.875 15 C -0.089 4.089 16 C -0.127 4.127 17 C 0.145 3.855 18 N -0.592 5.592 19 C -0.252 4.252 20 H 0.064 0.936 21 C 0.001 3.999 22 N -0.904 5.904 23 Si 0.902 3.098 24 H -0.283 1.283 25 H -0.291 1.291 26 H -0.284 1.284 27 C 0.172 3.828 28 C -0.133 4.133 29 H 0.102 0.898 30 H 0.056 0.944 31 H 0.057 0.943 32 H 0.134 0.866 33 H 0.134 0.866 34 H 0.135 0.865 35 H 0.106 0.894 36 H 0.109 0.891 37 H 0.400 0.600 38 H 0.062 0.938 39 H 0.064 0.936 40 H 0.068 0.932 41 H 0.059 0.941 42 H 0.047 0.953 43 H 0.016 0.984 44 H 0.052 0.948 45 H 0.254 0.746 46 H 0.017 0.983 47 H 0.087 0.913 48 H 0.050 0.950 49 H 0.057 0.943 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.903 19.219 15.377 30.435 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.222 6.222 3 C 0.108 3.892 4 C -0.224 4.224 5 C -0.087 4.087 6 C -0.167 4.167 7 C -0.013 4.013 8 Cl -0.027 7.027 9 C -0.089 4.089 10 C -0.141 4.141 11 C 0.304 3.696 12 O -0.413 6.413 13 N -0.377 5.377 14 C 0.002 3.998 15 C -0.108 4.108 16 C -0.166 4.166 17 C 0.019 3.981 18 N -0.315 5.315 19 C -0.381 4.381 20 H 0.082 0.918 21 C -0.197 4.197 22 N -0.548 5.548 23 Si 0.732 3.268 24 H -0.209 1.209 25 H -0.217 1.217 26 H -0.210 1.210 27 C 0.046 3.954 28 C -0.173 4.173 29 H 0.121 0.879 30 H 0.075 0.925 31 H 0.076 0.924 32 H 0.152 0.848 33 H 0.152 0.848 34 H 0.153 0.847 35 H 0.124 0.876 36 H 0.127 0.873 37 H 0.234 0.766 38 H 0.080 0.920 39 H 0.083 0.917 40 H 0.087 0.913 41 H 0.078 0.922 42 H 0.066 0.934 43 H 0.034 0.966 44 H 0.071 0.929 45 H 0.064 0.936 46 H 0.035 0.965 47 H 0.105 0.895 48 H 0.069 0.931 49 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -17.967 19.329 14.571 30.145 hybrid contribution 0.756 -0.230 -0.293 0.843 sum -17.211 19.098 14.278 29.408 Atomic orbital electron populations 1.23113 0.77917 1.04346 1.01406 1.86079 1.21656 1.26277 1.88191 1.18519 0.90901 0.84689 0.95109 1.21281 1.00368 0.92137 1.08614 1.20853 0.93687 0.97377 0.96793 1.20914 0.93768 0.97272 1.04731 1.20481 0.85037 0.93720 1.02026 1.98385 1.09306 1.98406 1.96590 1.18328 0.90622 0.93523 1.06418 1.20547 1.01378 0.96106 0.96083 1.20284 0.78005 0.80556 0.90727 1.90698 1.51007 1.53772 1.45820 1.46054 1.54811 1.27180 1.09696 1.21548 0.99415 0.97031 0.81809 1.21305 0.95549 0.94892 0.99095 1.22068 0.95777 1.00071 0.98677 1.20892 0.97310 0.91836 0.88073 1.44039 1.02834 1.73450 1.11190 1.19138 0.87442 1.12020 1.19544 0.91828 1.25043 0.97751 0.95215 1.01694 1.70017 1.33571 1.15057 1.36162 0.86375 0.82507 0.77055 0.80868 1.20908 1.21654 1.21041 1.20755 0.84993 0.90397 0.99236 1.22176 0.99830 1.01368 0.93880 0.87915 0.92511 0.92409 0.84846 0.84798 0.84715 0.87621 0.87279 0.76585 0.91979 0.91740 0.91339 0.92210 0.93444 0.96630 0.92924 0.93610 0.96484 0.89454 0.93123 0.92432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 19. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.16 9.81 101.05 0.99 1.15 16 2 O -0.31 -3.12 9.54 -19.42 -0.19 -3.30 16 3 C 0.15 1.63 6.66 -39.22 -0.26 1.37 16 4 C -0.21 -1.73 9.04 -39.42 -0.36 -2.09 16 5 C -0.07 -0.53 10.04 -39.61 -0.40 -0.93 16 6 C -0.15 -1.34 9.83 -39.52 -0.39 -1.73 16 7 C 0.01 0.16 6.31 -39.52 -0.25 -0.09 16 8 Cl -0.06 -0.61 27.29 -51.86 -1.42 -2.02 16 9 C -0.09 -1.00 4.39 -104.44 -0.46 -1.46 16 10 C -0.10 -1.09 5.21 -29.03 -0.15 -1.24 16 11 C 0.52 7.18 7.82 -10.98 -0.09 7.09 16 12 O -0.54 -9.50 16.03 5.56 0.09 -9.41 16 13 N -0.73 -9.27 5.27 -60.29 -0.32 -9.59 16 14 C 0.13 1.85 5.06 -4.04 -0.02 1.83 16 15 C -0.09 -1.43 2.19 -90.58 -0.20 -1.63 16 16 C -0.13 -2.11 5.25 -26.61 -0.14 -2.25 16 17 C 0.15 2.98 6.52 -3.71 -0.02 2.96 16 18 N -0.59 -14.77 2.99 -172.31 -0.52 -15.29 16 19 C -0.25 -6.93 9.58 -15.06 -0.14 -7.08 16 20 H 0.06 1.72 7.89 -52.49 -0.41 1.31 16 21 C 0.00 0.04 4.92 -17.43 -0.09 -0.05 16 22 N -0.90 -26.28 11.19 55.49 0.62 -25.66 16 23 Si 0.90 21.83 29.59 -169.99 -5.03 16.80 16 24 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 25 H -0.29 -7.07 7.11 56.52 0.40 -6.67 16 26 H -0.28 -6.83 7.11 56.52 0.40 -6.42 16 27 C 0.17 4.07 5.30 -3.71 -0.02 4.05 16 28 C -0.13 -2.50 5.36 -26.61 -0.14 -2.64 16 29 H 0.10 0.45 8.14 -51.93 -0.42 0.03 16 30 H 0.06 0.24 7.67 -51.93 -0.40 -0.16 16 31 H 0.06 0.32 7.65 -51.93 -0.40 -0.08 16 32 H 0.13 0.78 6.30 -52.49 -0.33 0.45 16 33 H 0.13 0.64 8.06 -52.49 -0.42 0.22 16 34 H 0.13 0.96 8.06 -52.49 -0.42 0.54 16 35 H 0.11 0.98 6.90 -51.93 -0.36 0.62 16 36 H 0.11 1.00 7.54 -51.93 -0.39 0.61 16 37 H 0.40 4.17 7.65 -40.82 -0.31 3.86 16 38 H 0.06 0.95 8.14 -51.93 -0.42 0.53 16 39 H 0.06 1.04 8.14 -51.93 -0.42 0.62 16 40 H 0.07 1.09 8.14 -51.93 -0.42 0.66 16 41 H 0.06 1.07 8.14 -51.93 -0.42 0.65 16 42 H 0.05 0.65 7.15 -51.93 -0.37 0.28 16 43 H 0.02 0.32 8.14 -51.92 -0.42 -0.10 16 44 H 0.05 1.07 7.93 -51.93 -0.41 0.66 16 45 H 0.25 7.16 8.31 -40.82 -0.34 6.82 16 46 H 0.02 0.42 8.14 -51.93 -0.42 0.00 16 47 H 0.09 2.33 6.07 -51.93 -0.31 2.01 16 48 H 0.05 0.87 8.14 -51.93 -0.42 0.44 16 49 H 0.06 1.13 8.14 -51.93 -0.42 0.70 16 LS Contribution 406.97 15.07 6.13 6.13 Total: -1.00 -33.60 406.97 -10.24 -43.84 By element: Atomic # 1 Polarization: 8.71 SS G_CDS: -7.49 Total: 1.22 kcal Atomic # 6 Polarization: -0.59 SS G_CDS: -2.13 Total: -2.72 kcal Atomic # 7 Polarization: -50.32 SS G_CDS: -0.21 Total: -50.53 kcal Atomic # 8 Polarization: -12.62 SS G_CDS: -0.10 Total: -12.72 kcal Atomic # 14 Polarization: 21.83 SS G_CDS: -5.03 Total: 16.80 kcal Atomic # 17 Polarization: -0.61 SS G_CDS: -1.42 Total: -2.02 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -33.60 -10.24 -43.84 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000097379144.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.442 kcal (2) G-P(sol) polarization free energy of solvation -33.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.045 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.238 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.841 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.283 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds