Wall clock time and date at job start Tue Mar 31 2020 06:07:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.36002 * 117.00015 * 2 1 4 4 C 1.38539 * 120.06757 * 0.25308 * 3 2 1 5 5 C 1.38252 * 120.02255 * 180.27606 * 4 3 2 6 6 C 1.38374 * 120.16693 * 359.74259 * 5 4 3 7 7 Cl 1.73599 * 119.93370 * 179.97438 * 6 5 4 8 8 C 1.38305 * 120.13233 * 359.97438 * 6 5 4 9 9 C 1.38711 * 119.97405 * 0.02562 * 8 6 5 10 10 N 1.40161 * 120.07702 * 179.97438 * 9 8 6 11 11 C 1.34779 * 120.00514 * 34.72800 * 10 9 8 12 12 O 1.21585 * 119.99650 * 355.44653 * 11 10 9 13 13 N 1.34768 * 120.00081 * 175.44004 * 11 10 9 14 14 C 1.46967 * 120.59413 * 185.27491 * 13 11 10 15 15 C 1.53374 * 108.63222 * 235.20832 * 14 13 11 16 16 N 1.46969 * 108.63596 * 310.57137 * 15 14 13 17 17 C 1.34778 * 120.59617 * 235.20485 * 16 15 14 18 18 O 1.21681 * 119.99669 * 5.30216 * 17 16 15 19 19 C 1.46374 * 119.99890 * 185.30128 * 17 16 15 20 20 H 1.07998 * 119.99770 * 354.97804 * 19 17 16 21 21 C 1.40043 * 119.99601 * 174.97634 * 19 17 16 22 22 N 1.30671 * 120.00588 * 0.02562 * 21 19 17 23 23 Si 1.86806 * 119.99896 * 180.02562 * 21 19 17 24 24 H 1.48499 * 109.47124 * 180.02562 * 23 21 19 25 25 H 1.48504 * 109.46808 * 299.99844 * 23 21 19 26 26 H 1.48500 * 109.47071 * 59.99473 * 23 21 19 27 27 C 1.46970 * 118.80906 * 55.48126 * 16 15 14 28 28 C 1.46969 * 120.59646 * 5.25354 * 13 11 10 29 29 H 1.09004 * 109.47122 * 59.99690 * 1 2 3 30 30 H 1.08997 * 109.47098 * 179.97438 * 1 2 3 31 31 H 1.09005 * 109.46972 * 300.00080 * 1 2 3 32 32 H 1.07996 * 119.98833 * 0.02562 * 4 3 2 33 33 H 1.08006 * 119.91633 * 179.72608 * 5 4 3 34 34 H 1.08001 * 120.01070 * 180.02562 * 8 6 5 35 35 H 0.97000 * 119.99637 * 214.72735 * 10 9 8 36 36 H 1.08992 * 109.61038 * 115.46680 * 14 13 11 37 37 H 1.08991 * 109.60975 * 354.94901 * 14 13 11 38 38 H 1.09006 * 109.60692 * 190.83327 * 15 14 13 39 39 H 1.09002 * 109.61272 * 70.31773 * 15 14 13 40 40 H 0.96999 * 120.00125 * 179.97438 * 22 21 19 41 41 H 1.09002 * 109.60838 * 64.26376 * 27 16 15 42 42 H 1.08994 * 109.60936 * 184.77835 * 27 16 15 43 43 H 1.08994 * 109.61550 * 244.53839 * 28 13 11 44 44 H 1.09003 * 109.60889 * 4.87655 * 28 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2118 0.0000 4 6 1.2933 2.3746 0.0053 5 6 1.9219 3.6059 -0.0005 6 6 3.3036 3.6813 -0.0062 7 17 4.0866 5.2306 -0.0141 8 6 4.0620 2.5247 -0.0056 9 6 3.4372 1.2863 0.0002 10 7 4.2037 0.1128 0.0003 11 6 5.3780 0.0749 0.6606 12 8 5.8125 1.0814 1.1864 13 7 6.0705 -1.0787 0.7382 14 6 7.2925 -1.1644 1.5503 15 6 8.4384 -1.6616 0.6603 16 7 7.9850 -2.8566 -0.0653 17 6 8.6776 -4.0102 0.0122 18 8 9.6321 -4.0975 0.7619 19 6 8.2816 -5.1579 -0.8054 20 1 7.3876 -5.1079 -1.4093 21 6 9.0619 -6.3207 -0.8044 22 7 10.1433 -6.3814 -0.0734 23 14 8.5570 -7.7853 -1.8484 24 1 9.5422 -8.8822 -1.6717 25 1 7.2131 -8.2547 -1.4254 26 1 8.5138 -7.3832 -3.2773 27 6 6.7661 -2.7693 -0.8818 28 6 5.6171 -2.2736 0.0126 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3633 0.5139 0.8900 32 1 0.2148 2.3191 0.0098 33 1 1.3330 4.5113 -0.0008 34 1 5.1403 2.5858 -0.0096 35 1 3.8890 -0.6720 -0.4750 36 1 7.1374 -1.8637 2.3717 37 1 7.5381 -0.1792 1.9465 38 1 9.2992 -1.9144 1.2795 39 1 8.7127 -0.8834 -0.0518 40 1 10.6836 -7.1870 -0.0725 41 1 6.9241 -2.0680 -1.7012 42 1 6.5222 -3.7536 -1.2813 43 1 5.3427 -3.0519 0.7246 44 1 4.7544 -2.0216 -0.6043 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000585120056.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:07:41 Heat of formation + Delta-G solvation = -50.587684 kcal Electronic energy + Delta-G solvation = -30726.159225 eV Core-core repulsion = 26285.023530 eV Total energy + Delta-G solvation = -4441.135695 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 367.113 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.16453 -39.97177 -38.31097 -37.76634 -36.46621 -35.87858 -34.89156 -33.11790 -32.53106 -31.15461 -30.40954 -29.72204 -27.64897 -27.30271 -25.99956 -23.67779 -23.15661 -22.53399 -21.94378 -20.24858 -19.34534 -18.72239 -18.00737 -17.43515 -16.62885 -16.25767 -16.11963 -15.91254 -15.69441 -15.38748 -14.94525 -14.58763 -14.37177 -14.34667 -14.22726 -14.05208 -13.93219 -13.61063 -13.16682 -12.82351 -12.64824 -12.45189 -12.22449 -12.06200 -11.73186 -11.68089 -11.44469 -11.23096 -11.16178 -11.08198 -11.02948 -10.99171 -10.75979 -10.50514 -10.31393 -10.15539 -9.95659 -8.97470 -8.89761 -8.68689 -8.05987 -7.69364 -7.29009 -6.28275 -4.74666 0.88440 0.94517 1.95359 2.47287 2.84835 3.00693 3.09240 3.14848 3.16273 3.43458 3.71002 4.00832 4.38688 4.40893 4.47653 4.53279 4.75506 4.76835 4.89060 5.03896 5.10399 5.15681 5.22745 5.34424 5.44607 5.54197 5.55065 5.59032 5.78345 5.85020 5.90504 5.94882 6.01274 6.11963 6.23466 6.31685 6.45264 6.48967 6.59730 6.88476 6.97425 7.35724 7.45427 7.79465 8.00442 8.22381 8.46862 8.92838 9.30763 10.47656 10.66062 Molecular weight = 367.11amu Principal moments of inertia in cm(-1) A = 0.014921 B = 0.002208 C = 0.001994 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1876.109118 B =12677.618316 C =14040.986512 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.314 6.314 3 C 0.102 3.898 4 C -0.179 4.179 5 C -0.092 4.092 6 C -0.051 4.051 7 Cl -0.068 7.068 8 C -0.078 4.078 9 C 0.158 3.842 10 N -0.679 5.679 11 C 0.707 3.293 12 O -0.580 6.580 13 N -0.614 5.614 14 C 0.116 3.884 15 C 0.107 3.893 16 N -0.643 5.643 17 C 0.559 3.441 18 O -0.574 6.574 19 C -0.545 4.545 20 H 0.073 0.927 21 C 0.088 3.912 22 N -0.766 5.766 23 Si 0.907 3.093 24 H -0.280 1.280 25 H -0.267 1.267 26 H -0.267 1.267 27 C 0.110 3.890 28 C 0.093 3.907 29 H 0.057 0.943 30 H 0.102 0.898 31 H 0.056 0.944 32 H 0.140 0.860 33 H 0.135 0.865 34 H 0.161 0.839 35 H 0.412 0.588 36 H 0.070 0.930 37 H 0.095 0.905 38 H 0.098 0.902 39 H 0.048 0.952 40 H 0.270 0.730 41 H 0.048 0.952 42 H 0.107 0.893 43 H 0.078 0.922 44 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -21.473 15.126 -2.510 26.385 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.227 6.227 3 C 0.055 3.945 4 C -0.199 4.199 5 C -0.112 4.112 6 C -0.078 4.078 7 Cl -0.040 7.040 8 C -0.099 4.099 9 C 0.061 3.939 10 N -0.330 5.330 11 C 0.410 3.590 12 O -0.458 6.458 13 N -0.350 5.350 14 C -0.007 4.007 15 C -0.018 4.018 16 N -0.381 5.381 17 C 0.365 3.635 18 O -0.457 6.457 19 C -0.582 4.582 20 H 0.090 0.910 21 C -0.132 4.132 22 N -0.394 5.394 23 Si 0.732 3.268 24 H -0.205 1.205 25 H -0.192 1.192 26 H -0.192 1.192 27 C -0.015 4.015 28 C -0.031 4.031 29 H 0.075 0.925 30 H 0.120 0.880 31 H 0.075 0.925 32 H 0.158 0.842 33 H 0.153 0.847 34 H 0.179 0.821 35 H 0.251 0.749 36 H 0.088 0.912 37 H 0.114 0.886 38 H 0.116 0.884 39 H 0.066 0.934 40 H 0.081 0.919 41 H 0.066 0.934 42 H 0.125 0.875 43 H 0.096 0.904 44 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -20.208 15.516 -1.607 25.528 hybrid contribution -0.800 -0.875 -0.830 1.447 sum -21.008 14.641 -2.438 25.722 Atomic orbital electron populations 1.23098 0.77889 1.04289 1.01423 1.86069 1.21733 1.26064 1.88859 1.18807 0.90387 0.85239 1.00115 1.20933 1.00094 0.90945 1.07910 1.20773 0.92306 0.97998 1.00077 1.20588 0.92480 0.86802 1.07943 1.98366 1.81055 1.27447 1.97088 1.21123 1.02181 0.88377 0.98221 1.16605 0.86270 0.86445 1.04546 1.42618 1.21022 1.14214 1.55128 1.15778 0.80109 0.84007 0.79145 1.90888 1.69560 1.32759 1.52561 1.47281 1.27380 1.09359 1.51013 1.22050 0.82996 1.02581 0.93096 1.21550 0.96612 0.88271 0.95410 1.48183 1.27402 1.11183 1.51362 1.18278 0.81741 0.80829 0.82606 1.90601 1.30401 1.82361 1.42301 1.20900 1.11271 0.97715 1.28292 0.90951 1.25724 0.93931 0.99161 0.94421 1.69990 1.11148 1.27080 1.31214 0.86444 0.79078 0.80637 0.80688 1.20521 1.19217 1.19230 1.21870 0.84882 1.02487 0.92286 1.22330 0.97411 0.87403 0.95987 0.92473 0.87954 0.92489 0.84235 0.84686 0.82144 0.74921 0.91203 0.88643 0.88421 0.93373 0.91900 0.93360 0.87523 0.90413 0.90810 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.14 9.81 101.05 0.99 1.13 16 2 O -0.31 -2.86 10.05 -19.75 -0.20 -3.06 16 3 C 0.10 1.05 6.70 -39.09 -0.26 0.78 16 4 C -0.18 -1.47 9.04 -39.47 -0.36 -1.83 16 5 C -0.09 -0.81 9.82 -39.53 -0.39 -1.20 16 6 C -0.05 -0.56 6.32 -39.51 -0.25 -0.81 16 7 Cl -0.07 -0.73 28.95 -51.86 -1.50 -2.23 16 8 C -0.08 -1.00 8.48 -39.38 -0.33 -1.33 16 9 C 0.16 1.95 6.32 -83.49 -0.53 1.42 16 10 N -0.68 -8.54 5.11 -14.11 -0.07 -8.61 16 11 C 0.71 10.85 8.15 -86.92 -0.71 10.14 16 12 O -0.58 -10.38 13.17 5.29 0.07 -10.31 16 13 N -0.61 -9.33 2.95 -177.95 -0.52 -9.85 16 14 C 0.12 1.92 6.60 -3.59 -0.02 1.89 16 15 C 0.11 2.04 6.60 -3.59 -0.02 2.01 16 16 N -0.64 -13.76 2.94 -173.86 -0.51 -14.28 16 17 C 0.56 15.14 7.62 -12.99 -0.10 15.04 16 18 O -0.57 -17.92 14.45 5.21 0.08 -17.84 16 19 C -0.55 -14.41 8.86 -35.63 -0.32 -14.72 16 20 H 0.07 1.70 5.66 -52.49 -0.30 1.40 16 21 C 0.09 2.34 5.50 -17.37 -0.10 2.25 16 22 N -0.77 -22.20 11.84 55.55 0.66 -21.54 16 23 Si 0.91 19.14 29.56 -169.99 -5.02 14.11 16 24 H -0.28 -5.85 7.11 56.52 0.40 -5.45 16 25 H -0.27 -5.45 7.11 56.52 0.40 -5.05 16 26 H -0.27 -5.48 7.11 56.52 0.40 -5.08 16 27 C 0.11 1.84 6.51 -3.36 -0.02 1.82 16 28 C 0.09 1.26 6.57 -3.36 -0.02 1.24 16 29 H 0.06 0.22 7.67 -51.93 -0.40 -0.18 16 30 H 0.10 0.37 8.14 -51.93 -0.42 -0.06 16 31 H 0.06 0.24 7.65 -51.93 -0.40 -0.15 16 32 H 0.14 0.74 6.30 -52.49 -0.33 0.41 16 33 H 0.14 0.88 8.06 -52.48 -0.42 0.46 16 34 H 0.16 2.37 6.20 -52.49 -0.33 2.04 16 35 H 0.41 4.34 6.03 -40.82 -0.25 4.10 16 36 H 0.07 1.17 8.14 -51.93 -0.42 0.75 16 37 H 0.10 1.54 6.99 -51.93 -0.36 1.17 16 38 H 0.10 2.06 6.99 -51.93 -0.36 1.70 16 39 H 0.05 0.88 8.14 -51.93 -0.42 0.46 16 40 H 0.27 7.13 8.29 -40.82 -0.34 6.80 16 41 H 0.05 0.76 8.14 -51.93 -0.42 0.34 16 42 H 0.11 1.81 5.34 -51.93 -0.28 1.53 16 43 H 0.08 1.09 8.14 -51.93 -0.42 0.67 16 44 H 0.07 0.75 5.61 -51.93 -0.29 0.46 16 LS Contribution 374.74 15.07 5.65 5.65 Total: -1.00 -35.05 374.74 -8.78 -43.82 By element: Atomic # 1 Polarization: 11.26 SS G_CDS: -4.96 Total: 6.30 kcal Atomic # 6 Polarization: 20.27 SS G_CDS: -2.44 Total: 17.83 kcal Atomic # 7 Polarization: -53.83 SS G_CDS: -0.45 Total: -54.28 kcal Atomic # 8 Polarization: -31.16 SS G_CDS: -0.05 Total: -31.21 kcal Atomic # 14 Polarization: 19.14 SS G_CDS: -5.02 Total: 14.11 kcal Atomic # 17 Polarization: -0.73 SS G_CDS: -1.50 Total: -2.23 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -35.05 -8.78 -43.82 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000585120056.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.763 kcal (2) G-P(sol) polarization free energy of solvation -35.046 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.809 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.779 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.824 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.588 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds