Wall clock time and date at job start Tue Mar 31 2020 04:59:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.26976 * 125.12160 * 2 1 4 4 N 1.39342 * 114.48937 * 179.97438 * 3 2 1 5 5 C 1.38997 * 125.65209 * 179.97438 * 4 3 2 6 6 C 1.39275 * 119.93312 * 179.70121 * 5 4 3 7 7 C 1.37119 * 120.06240 * 179.72182 * 6 5 4 8 8 C 1.39806 * 119.93611 * 0.57488 * 7 6 5 9 9 C 1.47522 * 120.06881 * 179.72094 * 8 7 6 10 10 O 1.21598 * 119.99659 * 311.56740 * 9 8 7 11 11 N 1.34773 * 120.00016 * 131.56323 * 9 8 7 12 12 C 1.46494 * 120.00000 * 5.02106 * 11 9 8 13 13 C 1.50701 * 109.47608 * 95.72068 * 12 11 9 14 14 H 1.08007 * 119.99824 * 359.97438 * 13 12 11 15 15 C 1.37873 * 120.00549 * 179.97438 * 13 12 11 16 16 N 1.31517 * 120.00140 * 179.97438 * 15 13 12 17 17 Si 1.86793 * 119.99825 * 0.02562 * 15 13 12 18 18 H 1.48495 * 109.47645 * 89.99367 * 17 15 13 19 19 H 1.48505 * 109.47301 * 209.99623 * 17 15 13 20 20 H 1.48506 * 109.47074 * 329.99532 * 17 15 13 21 21 C 1.46498 * 119.99548 * 185.01296 * 11 9 8 22 22 C 1.50704 * 109.47015 * 90.00873 * 21 11 9 23 23 C 1.34513 * 125.79183 * 89.99574 * 22 21 11 24 24 C 1.41383 * 106.84128 * 180.02562 * 23 22 21 25 25 C 1.34517 * 106.83932 * 359.97438 * 24 23 22 26 26 O 1.34300 * 125.78643 * 269.69412 * 22 21 11 27 27 C 1.39813 * 119.87112 * 359.70428 * 8 7 6 28 28 C 1.37123 * 119.93207 * 359.97438 * 27 8 7 29 29 C 1.47231 * 108.69588 * 359.97438 * 4 3 2 30 30 C 1.51208 * 125.11752 * 179.69239 * 2 1 3 31 31 H 1.09000 * 109.46960 * 0.02888 * 1 2 3 32 32 H 1.08995 * 109.47527 * 240.02443 * 1 2 3 33 33 H 1.09004 * 109.47219 * 120.02607 * 1 2 3 34 34 H 1.08001 * 119.96801 * 0.02562 * 6 5 4 35 35 H 1.07997 * 120.03051 * 180.25447 * 7 6 5 36 36 H 1.09006 * 109.47294 * 215.71561 * 12 11 9 37 37 H 1.08997 * 109.47322 * 335.72093 * 12 11 9 38 38 H 0.97000 * 119.99913 * 180.02562 * 16 15 13 39 39 H 1.09006 * 109.46881 * 209.99975 * 21 11 9 40 40 H 1.08995 * 109.47749 * 330.00771 * 21 11 9 41 41 H 1.08002 * 126.57934 * 359.95963 * 23 22 21 42 42 H 1.07998 * 126.58067 * 179.97438 * 24 23 22 43 43 H 1.08005 * 125.78950 * 179.97438 * 25 24 23 44 44 H 1.08001 * 120.03414 * 179.97438 * 27 8 7 45 45 H 1.07998 * 119.96538 * 180.02562 * 28 27 8 46 46 H 1.09001 * 110.66097 * 118.43871 * 29 4 3 47 47 H 1.09000 * 110.66636 * 241.56035 * 29 4 3 48 48 H 1.09004 * 110.55971 * 298.58295 * 30 2 1 49 49 H 1.09004 * 110.56090 * 61.42230 * 30 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2375 1.0386 0.0000 4 7 3.6070 0.7815 0.0006 5 6 4.6117 1.7421 0.0002 6 6 5.9481 1.3500 0.0071 7 6 6.9413 2.2953 0.0010 8 6 6.6114 3.6539 -0.0001 9 6 7.6776 4.6734 -0.0004 10 8 8.5997 4.5891 0.7878 11 7 7.6298 5.6982 -0.8745 12 6 6.4658 5.8615 -1.7487 13 6 5.5029 6.8394 -1.1260 14 1 5.7348 7.2935 -0.1739 15 6 4.3261 7.1544 -1.7717 16 7 3.4857 8.0074 -1.2279 17 14 3.9248 6.3685 -3.4180 18 1 3.1746 5.1066 -3.1945 19 1 3.0958 7.3013 -4.2229 20 1 5.1851 6.0727 -4.1457 21 6 8.7419 6.6488 -0.9501 22 6 9.7492 6.1642 -1.9608 23 6 9.7521 6.4605 -3.2729 24 6 10.8656 5.7989 -3.8398 25 6 11.4768 5.1383 -2.8401 26 8 10.7995 5.3679 -1.7033 27 6 5.2689 4.0445 -0.0011 28 6 4.2800 3.0946 -0.0017 29 6 3.8136 -0.6763 0.0016 30 6 2.3769 -1.2368 0.0066 31 1 -0.3633 1.0277 -0.0005 32 1 -0.3634 -0.5134 0.8901 33 1 -0.3634 -0.5143 -0.8898 34 1 6.2023 0.3003 0.0124 35 1 7.9774 1.9907 0.0022 36 1 6.7899 6.2386 -2.7188 37 1 5.9718 4.8988 -1.8797 38 1 2.6576 8.2287 -1.6820 39 1 8.3648 7.6258 -1.2526 40 1 9.2179 6.7298 0.0271 41 1 9.0398 7.0833 -3.7937 42 1 11.1674 5.8198 -4.8766 43 1 12.3640 4.5297 -2.9348 44 1 5.0111 5.0933 -0.0016 45 1 3.2428 3.3957 -0.0029 46 1 4.3487 -0.9896 -0.8948 47 1 4.3482 -0.9884 0.8988 48 1 2.1977 -1.8260 0.9060 49 1 2.1977 -1.8356 -0.8864 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000058201426.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 04:59:45 Heat of formation + Delta-G solvation = 76.436013 kcal Electronic energy + Delta-G solvation = -32953.910684 eV Core-core repulsion = 28656.549094 eV Total energy + Delta-G solvation = -4297.361590 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -42.23060 -40.37931 -39.53512 -37.75392 -35.31719 -33.75509 -32.82136 -32.54398 -31.26640 -31.03233 -30.16443 -29.81344 -27.96532 -27.48437 -25.49083 -23.76745 -22.79674 -22.23210 -21.43662 -21.30779 -20.37848 -19.35727 -18.84075 -17.58401 -17.26936 -16.83375 -16.57190 -16.30818 -16.04098 -15.37637 -15.09098 -14.67375 -14.39692 -14.19186 -14.06463 -13.88334 -13.68824 -13.31595 -13.15778 -13.08429 -12.94367 -12.75430 -12.59433 -12.52910 -12.43767 -12.38404 -12.14560 -12.00469 -11.90327 -11.64703 -11.44596 -11.38100 -10.89617 -10.72470 -10.58465 -10.33836 -10.17766 -9.71465 -9.62583 -9.39313 -9.15833 -8.77067 -8.51974 -8.22796 -7.89625 -7.15126 -6.27435 -4.29167 1.38249 1.88181 1.97525 2.21826 2.50294 2.84789 3.18694 3.22186 3.26089 3.29627 3.51795 3.92279 4.03419 4.18799 4.24645 4.31316 4.55337 4.68504 5.00805 5.02988 5.16853 5.18306 5.22854 5.26901 5.29796 5.30292 5.30929 5.39674 5.42063 5.48818 5.61541 5.76042 5.82145 5.91370 6.05614 6.05825 6.09290 6.21729 6.28351 6.37537 6.42179 6.53007 6.65412 6.72422 6.78184 6.79746 7.05418 7.25116 7.26421 7.40662 7.46868 7.54096 7.94745 8.04744 8.35480 8.76431 8.87230 9.31747 10.83742 Molecular weight = 367.17amu Principal moments of inertia in cm(-1) A = 0.009116 B = 0.003183 C = 0.002626 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3070.836338 B = 8795.001571 C =10659.754929 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 C 0.054 3.946 3 N -0.226 5.226 4 N -0.475 5.475 5 C 0.240 3.760 6 C -0.199 4.199 7 C -0.033 4.033 8 C -0.169 4.169 9 C 0.569 3.431 10 O -0.558 6.558 11 N -0.583 5.583 12 C 0.202 3.798 13 C -0.546 4.546 14 H 0.084 0.916 15 C 0.085 3.915 16 N -0.882 5.882 17 Si 0.861 3.139 18 H -0.269 1.269 19 H -0.282 1.282 20 H -0.263 1.263 21 C 0.195 3.805 22 C -0.014 4.014 23 C -0.205 4.205 24 C -0.217 4.217 25 C -0.052 4.052 26 O -0.167 6.167 27 C -0.037 4.037 28 C -0.171 4.171 29 C 0.082 3.918 30 C -0.131 4.131 31 H 0.079 0.921 32 H 0.080 0.920 33 H 0.080 0.920 34 H 0.120 0.880 35 H 0.125 0.875 36 H 0.033 0.967 37 H 0.041 0.959 38 H 0.268 0.732 39 H 0.117 0.883 40 H 0.094 0.906 41 H 0.148 0.852 42 H 0.143 0.857 43 H 0.196 0.804 44 H 0.177 0.823 45 H 0.132 0.868 46 H 0.078 0.922 47 H 0.078 0.922 48 H 0.096 0.904 49 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.873 -16.245 -1.969 16.387 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.142 4.142 3 N -0.029 5.029 4 N -0.275 5.275 5 C 0.142 3.858 6 C -0.222 4.222 7 C -0.053 4.053 8 C -0.173 4.173 9 C 0.359 3.641 10 O -0.438 6.438 11 N -0.312 5.312 12 C 0.081 3.919 13 C -0.584 4.584 14 H 0.102 0.898 15 C -0.120 4.120 16 N -0.518 5.518 17 Si 0.687 3.313 18 H -0.194 1.194 19 H -0.208 1.208 20 H -0.187 1.187 21 C 0.072 3.928 22 C -0.066 4.066 23 C -0.225 4.225 24 C -0.236 4.236 25 C -0.120 4.120 26 O -0.062 6.062 27 C -0.055 4.055 28 C -0.192 4.192 29 C -0.042 4.042 30 C -0.171 4.171 31 H 0.098 0.902 32 H 0.099 0.901 33 H 0.098 0.902 34 H 0.137 0.863 35 H 0.143 0.857 36 H 0.051 0.949 37 H 0.059 0.941 38 H 0.078 0.922 39 H 0.135 0.865 40 H 0.112 0.888 41 H 0.166 0.834 42 H 0.161 0.839 43 H 0.213 0.787 44 H 0.194 0.806 45 H 0.150 0.850 46 H 0.096 0.904 47 H 0.097 0.903 48 H 0.114 0.886 49 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 1.328 -15.279 -1.298 15.391 hybrid contribution -0.213 -1.303 -1.418 1.937 sum 1.115 -16.582 -2.715 16.840 Atomic orbital electron populations 1.20266 0.85722 1.04265 1.03012 1.25016 0.97163 0.90619 1.01356 1.73839 0.90359 1.28010 1.10667 1.47999 0.99652 1.03409 1.76444 1.17503 0.85387 0.87609 0.95289 1.20166 0.90011 0.99375 1.12633 1.20614 0.98683 0.91049 0.94953 1.19710 0.93961 0.93280 1.10383 1.18270 0.84861 0.81095 0.79900 1.90706 1.36691 1.76766 1.39608 1.47851 1.18921 1.26176 1.38300 1.20044 0.83574 0.98182 0.90108 1.21327 1.02860 1.25792 1.08422 0.89818 1.24807 0.95790 0.94295 0.97101 1.69881 1.10496 1.32713 1.38757 0.87053 0.79452 0.80080 0.84695 1.19393 1.20799 1.18732 1.19726 0.83592 0.92585 0.96923 1.23274 0.90310 0.96249 0.96737 1.21672 1.01075 1.06007 0.93720 1.21789 0.98533 1.03053 1.00273 1.23964 0.99896 1.04455 0.83681 1.84106 1.33585 1.53889 1.34632 1.22275 0.90391 1.03286 0.89553 1.20634 1.00829 0.89885 1.07856 1.22653 0.97515 0.81312 1.02769 1.22271 0.92193 0.98158 1.04463 0.90190 0.90136 0.90151 0.86253 0.85702 0.94938 0.94119 0.92170 0.86521 0.88755 0.83400 0.83880 0.78677 0.80633 0.85014 0.90355 0.90345 0.88611 0.88663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.52 10.48 36.01 0.38 -0.15 16 2 C 0.05 0.57 7.43 -79.08 -0.59 -0.01 16 3 N -0.23 -3.39 11.18 34.79 0.39 -3.00 16 4 N -0.48 -7.21 4.07 -57.48 -0.23 -7.44 16 5 C 0.24 4.15 6.71 -83.85 -0.56 3.59 16 6 C -0.20 -3.16 9.45 -39.60 -0.37 -3.53 16 7 C -0.03 -0.59 9.68 -39.40 -0.38 -0.97 16 8 C -0.17 -3.45 4.95 -104.94 -0.52 -3.97 16 9 C 0.57 12.51 7.22 -12.48 -0.09 12.42 16 10 O -0.56 -13.22 16.57 5.28 0.09 -13.13 16 11 N -0.58 -12.35 2.44 -177.67 -0.43 -12.78 16 12 C 0.20 4.51 3.73 -5.20 -0.02 4.49 16 13 C -0.55 -13.78 7.39 -34.44 -0.25 -14.04 16 14 H 0.08 2.34 8.06 -52.48 -0.42 1.91 16 15 C 0.09 2.23 5.47 -17.82 -0.10 2.13 16 16 N -0.88 -24.74 13.96 55.43 0.77 -23.96 16 17 Si 0.86 19.86 27.47 -169.99 -4.67 15.19 16 18 H -0.27 -6.24 7.11 56.52 0.40 -5.84 16 19 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 20 H -0.26 -5.83 6.54 56.52 0.37 -5.46 16 21 C 0.20 3.67 5.99 -5.19 -0.03 3.64 16 22 C -0.01 -0.25 6.90 -35.62 -0.25 -0.50 16 23 C -0.20 -3.37 10.81 -39.70 -0.43 -3.80 16 24 C -0.22 -3.10 10.91 -39.70 -0.43 -3.54 16 25 C -0.05 -0.73 12.09 29.42 0.36 -0.37 16 26 O -0.17 -2.98 10.65 5.71 0.06 -2.92 16 27 C -0.04 -0.77 7.48 -39.40 -0.29 -1.06 16 28 C -0.17 -3.34 9.60 -39.61 -0.38 -3.72 16 29 C 0.08 0.86 6.55 -3.00 -0.02 0.84 16 30 C -0.13 -1.06 6.97 -27.00 -0.19 -1.25 16 31 H 0.08 0.65 8.14 -51.93 -0.42 0.23 16 32 H 0.08 0.41 8.14 -51.93 -0.42 -0.01 16 33 H 0.08 0.42 8.14 -51.93 -0.42 0.00 16 34 H 0.12 1.52 7.29 -52.49 -0.38 1.14 16 35 H 0.13 2.04 8.06 -52.49 -0.42 1.62 16 36 H 0.03 0.72 7.17 -51.93 -0.37 0.35 16 37 H 0.04 0.93 4.83 -51.93 -0.25 0.68 16 38 H 0.27 7.11 8.31 -40.82 -0.34 6.77 16 39 H 0.12 2.05 8.07 -51.93 -0.42 1.63 16 40 H 0.09 1.78 7.36 -51.93 -0.38 1.40 16 41 H 0.15 2.30 8.06 -52.49 -0.42 1.87 16 42 H 0.14 1.64 8.06 -52.49 -0.42 1.22 16 43 H 0.20 1.90 8.06 -52.48 -0.42 1.48 16 44 H 0.18 4.10 4.74 -52.49 -0.25 3.85 16 45 H 0.13 2.64 7.65 -52.49 -0.40 2.24 16 46 H 0.08 0.75 8.14 -51.93 -0.42 0.32 16 47 H 0.08 0.73 8.14 -51.93 -0.42 0.31 16 48 H 0.10 0.58 8.14 -51.93 -0.42 0.16 16 49 H 0.10 0.59 8.14 -51.93 -0.42 0.17 16 LS Contribution 409.62 15.07 6.17 6.17 Total: -1.00 -33.01 409.62 -8.73 -41.74 By element: Atomic # 1 Polarization: 16.61 SS G_CDS: -6.70 Total: 9.91 kcal Atomic # 6 Polarization: -5.61 SS G_CDS: -4.18 Total: -9.78 kcal Atomic # 7 Polarization: -47.69 SS G_CDS: 0.49 Total: -47.19 kcal Atomic # 8 Polarization: -16.19 SS G_CDS: 0.15 Total: -16.04 kcal Atomic # 14 Polarization: 19.86 SS G_CDS: -4.67 Total: 15.19 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -33.01 -8.73 -41.74 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000058201426.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.172 kcal (2) G-P(sol) polarization free energy of solvation -33.009 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 85.163 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.727 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.736 kcal (6) G-S(sol) free energy of system = (1) + (5) 76.436 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds