Wall clock time and date at job start Tue Mar 31 2020 06:57:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.34944 * 126.03310 * 2 1 4 4 C 1.35321 * 107.74546 * 179.97438 * 3 2 1 5 5 C 1.50699 * 126.03990 * 179.97438 * 4 3 2 6 6 N 1.46897 * 109.46896 * 90.00521 * 5 4 3 7 7 C 1.46202 * 110.99892 * 197.07886 * 6 5 4 8 8 C 1.51329 * 109.10346 * 144.77450 * 7 6 5 9 9 C 1.53793 * 109.62657 * 92.39841 * 8 7 6 10 10 N 1.47609 * 111.30275 * 319.97769 * 9 8 7 11 11 C 1.34782 * 118.74759 * 138.32237 * 10 9 8 12 12 O 1.21543 * 119.99718 * 352.11408 * 11 10 9 13 13 C 1.47886 * 119.99774 * 172.11808 * 11 10 9 14 14 C 1.39919 * 120.02903 * 26.92875 * 13 11 10 15 15 C 1.38328 * 120.36146 * 179.97438 * 14 13 11 16 16 C 1.37754 * 120.40800 * 0.02562 * 15 14 13 17 17 C 1.40746 * 120.04394 * 0.02562 * 16 15 14 18 18 C 1.41433 * 120.18263 * 179.97438 * 17 16 15 19 19 H 1.08007 * 119.99731 * 24.79065 * 18 17 16 20 20 C 1.39936 * 120.00583 * 204.79360 * 18 17 16 21 21 N 1.30827 * 119.99717 * 17.73207 * 20 18 17 22 22 Si 1.86797 * 120.00275 * 197.73270 * 20 18 17 23 23 H 1.48498 * 109.46866 * 60.00059 * 22 20 18 24 24 H 1.48500 * 109.47054 * 179.97438 * 22 20 18 25 25 H 1.48496 * 109.47275 * 300.00087 * 22 20 18 26 26 C 1.38992 * 120.02156 * 206.64988 * 13 11 10 27 27 C 1.44888 * 122.50748 * 318.30090 * 10 9 8 28 28 C 1.41444 * 111.00203 * 66.04320 * 6 5 4 29 29 C 1.39876 * 107.91632 * 0.02562 * 4 3 2 30 30 N 1.30839 * 108.20447 * 359.73631 * 29 4 3 31 31 H 1.09000 * 109.46789 * 90.00756 * 1 2 3 32 32 H 1.08991 * 109.47735 * 330.00449 * 1 2 3 33 33 H 1.08998 * 109.46944 * 209.99952 * 1 2 3 34 34 H 1.07994 * 126.13019 * 359.95494 * 3 2 1 35 35 H 1.09001 * 109.46987 * 209.99991 * 5 4 3 36 36 H 1.08995 * 109.47320 * 330.00082 * 5 4 3 37 37 H 1.08993 * 109.53058 * 264.65785 * 7 6 5 38 38 H 1.08998 * 109.53022 * 24.87869 * 7 6 5 39 39 H 1.08996 * 109.42575 * 332.35440 * 8 7 6 40 40 H 1.09007 * 109.43774 * 212.43959 * 8 7 6 41 41 H 1.09007 * 109.10909 * 199.51098 * 9 8 7 42 42 H 1.09004 * 109.06775 * 80.41829 * 9 8 7 43 43 H 1.08003 * 119.81462 * 359.97438 * 14 13 11 44 44 H 1.08000 * 119.79440 * 180.02562 * 15 14 13 45 45 H 1.08004 * 119.97574 * 179.97438 * 16 15 14 46 46 H 0.97003 * 120.00016 * 180.02562 * 21 20 18 47 47 H 1.08004 * 120.20290 * 359.97438 * 26 13 11 48 48 H 1.08999 * 109.43038 * 329.67768 * 27 10 9 49 49 H 1.08996 * 109.39777 * 209.79231 * 27 10 9 50 50 H 1.08995 * 109.38641 * 311.84256 * 28 6 5 51 51 H 1.08999 * 109.38517 * 71.52874 * 28 6 5 52 52 H 1.07999 * 125.89444 * 179.97438 * 29 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2589 1.0913 0.0000 4 6 3.5437 0.6666 0.0006 5 6 4.7680 1.5454 0.0002 6 7 5.1655 1.8318 1.3851 7 6 6.0729 2.9767 1.4437 8 6 5.7952 3.7647 2.7054 9 6 6.7122 3.2691 3.8362 10 7 6.8493 1.7996 3.8104 11 6 8.0645 1.2580 4.0263 12 8 9.0450 1.9729 4.0943 13 6 8.2046 -0.2062 4.1803 14 6 7.2796 -1.0654 3.5770 15 6 7.4045 -2.4360 3.7162 16 6 8.4401 -2.9709 4.4503 17 6 9.3797 -2.1223 5.0653 18 6 10.4438 -2.6683 5.8201 19 1 10.7885 -3.6722 5.6200 20 6 11.0502 -1.9081 6.8264 21 7 10.4399 -0.8565 7.3093 22 14 12.7310 -2.3946 7.4801 23 1 13.7183 -2.3744 6.3710 24 1 13.1498 -1.4343 8.5325 25 1 12.6615 -3.7616 8.0560 26 6 9.2587 -0.7299 4.9195 27 6 5.7272 0.9172 3.5623 28 6 5.5956 0.6557 2.0426 29 6 3.5347 -0.7321 0.0003 30 7 2.2892 -1.1328 0.0054 31 1 -0.3633 -0.0001 -1.0277 32 1 -0.3634 0.8899 0.5137 33 1 -0.3633 -0.8900 0.5138 34 1 1.9281 2.1193 -0.0007 35 1 5.5822 1.0340 -0.5131 36 1 4.5443 2.4799 -0.5142 37 1 7.1041 2.6241 1.4538 38 1 5.9128 3.6134 0.5736 39 1 4.7538 3.6280 2.9964 40 1 5.9848 4.8223 2.5217 41 1 6.2915 3.5715 4.7953 42 1 7.6971 3.7215 3.7201 43 1 6.4637 -0.6562 2.9997 44 1 6.6855 -3.0908 3.2463 45 1 8.5307 -4.0420 4.5547 46 1 10.8603 -0.3292 8.0065 47 1 9.9778 -0.0706 5.3828 48 1 4.8125 1.3813 3.9311 49 1 5.8886 -0.0281 4.0805 50 1 4.8694 -0.1394 1.8738 51 1 6.5628 0.3509 1.6429 52 1 4.4054 -1.3709 0.0003 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000069771445.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:57:24 Heat of formation + Delta-G solvation = 121.914856 kcal Electronic energy + Delta-G solvation = -33976.395254 eV Core-core repulsion = 29751.412959 eV Total energy + Delta-G solvation = -4224.982295 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 368.195 amu Computer time = 1.59 seconds Orbital eigenvalues (eV) -41.39911 -40.27268 -38.02434 -37.01360 -35.06497 -34.04448 -33.36820 -32.83966 -31.02711 -29.87700 -29.50195 -28.48406 -27.33812 -25.99942 -25.22647 -24.36352 -22.93371 -21.47730 -21.11990 -20.92325 -20.27491 -20.15944 -18.62215 -17.51629 -17.02792 -16.25513 -16.17063 -15.69214 -15.64568 -15.30343 -15.07862 -14.84055 -14.59243 -14.51802 -14.15346 -13.54755 -13.45528 -13.30282 -13.20456 -12.90974 -12.82590 -12.73657 -12.54457 -12.47265 -12.26454 -11.84541 -11.75119 -11.65859 -11.32323 -11.30522 -11.14320 -11.06562 -10.83172 -10.73633 -10.53491 -10.46184 -10.23199 -9.98294 -9.54299 -9.50856 -9.16369 -8.87356 -8.58698 -8.22174 -8.01363 -7.56351 -7.43720 -6.78923 -4.38615 1.74983 2.29614 2.36119 2.62165 2.83718 3.08407 3.10131 3.18206 3.53656 3.81721 3.93287 4.07021 4.31029 4.61402 4.65495 4.83461 4.86486 4.92322 5.05298 5.08318 5.10171 5.19569 5.29608 5.33902 5.44709 5.58044 5.58307 5.62202 5.65278 5.72843 5.77872 5.80878 6.00851 6.01352 6.04620 6.08051 6.16370 6.30363 6.33623 6.39836 6.49855 6.74743 6.83712 7.00149 7.01262 7.08911 7.20991 7.23434 7.41969 7.48352 7.56592 7.72619 7.81836 7.93745 8.05473 8.20813 8.52931 8.82727 8.86333 8.94773 10.16399 Molecular weight = 368.20amu Principal moments of inertia in cm(-1) A = 0.013755 B = 0.002493 C = 0.002198 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2035.136974 B =11226.817528 C =12737.551085 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.103 3.897 2 N -0.381 5.381 3 C 0.072 3.928 4 C -0.228 4.228 5 C 0.140 3.860 6 N -0.557 5.557 7 C 0.073 3.927 8 C -0.126 4.126 9 C 0.111 3.889 10 N -0.609 5.609 11 C 0.562 3.438 12 O -0.551 6.551 13 C -0.124 4.124 14 C -0.256 4.256 15 C -0.099 4.099 16 C -0.211 4.211 17 C 0.101 3.899 18 C -0.461 4.461 19 H 0.080 0.920 20 C 0.074 3.926 21 N -0.788 5.788 22 Si 0.910 3.090 23 H -0.263 1.263 24 H -0.278 1.278 25 H -0.265 1.265 26 C -0.096 4.096 27 C 0.085 3.915 28 C 0.052 3.948 29 C 0.055 3.945 30 N -0.298 5.298 31 H 0.072 0.928 32 H 0.085 0.915 33 H 0.088 0.912 34 H 0.171 0.829 35 H 0.041 0.959 36 H 0.075 0.925 37 H 0.045 0.955 38 H 0.067 0.933 39 H 0.076 0.924 40 H 0.073 0.927 41 H 0.056 0.944 42 H 0.085 0.915 43 H 0.135 0.865 44 H 0.092 0.908 45 H 0.094 0.906 46 H 0.284 0.716 47 H 0.128 0.872 48 H 0.070 0.930 49 H 0.128 0.872 50 H 0.087 0.913 51 H 0.038 0.962 52 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.367 7.732 -12.502 22.753 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.038 4.038 2 N -0.163 5.163 3 C -0.075 4.075 4 C -0.240 4.240 5 C 0.012 3.988 6 N -0.281 5.281 7 C -0.054 4.054 8 C -0.165 4.165 9 C -0.011 4.011 10 N -0.342 5.342 11 C 0.355 3.645 12 O -0.430 6.430 13 C -0.127 4.127 14 C -0.275 4.275 15 C -0.117 4.117 16 C -0.231 4.231 17 C 0.098 3.902 18 C -0.490 4.490 19 H 0.098 0.902 20 C -0.144 4.144 21 N -0.413 5.413 22 Si 0.734 3.266 23 H -0.187 1.187 24 H -0.203 1.203 25 H -0.190 1.190 26 C -0.116 4.116 27 C -0.039 4.039 28 C -0.078 4.078 29 C -0.131 4.131 30 N -0.119 5.119 31 H 0.090 0.910 32 H 0.104 0.896 33 H 0.106 0.894 34 H 0.188 0.812 35 H 0.059 0.941 36 H 0.094 0.906 37 H 0.063 0.937 38 H 0.086 0.914 39 H 0.095 0.905 40 H 0.091 0.909 41 H 0.074 0.926 42 H 0.104 0.896 43 H 0.152 0.848 44 H 0.111 0.889 45 H 0.112 0.888 46 H 0.095 0.905 47 H 0.146 0.854 48 H 0.088 0.912 49 H 0.145 0.855 50 H 0.105 0.895 51 H 0.056 0.944 52 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -18.155 7.455 -12.011 23.010 hybrid contribution 1.762 0.279 0.092 1.786 sum -16.394 7.734 -11.920 21.694 Atomic orbital electron populations 1.21813 0.74451 1.04460 1.03106 1.48458 1.06538 1.03985 1.57320 1.22248 0.90761 0.93134 1.01368 1.19957 0.94387 0.93605 1.16083 1.20251 0.92614 0.97288 0.88616 1.58367 1.46531 1.07835 1.15395 1.21503 0.94825 0.91441 0.97637 1.21845 1.00778 0.98913 0.94978 1.21739 1.01081 0.80498 0.97806 1.47622 1.08788 1.05749 1.72026 1.19038 0.81989 0.89099 0.74417 1.90658 1.37807 1.63288 1.51253 1.19436 0.99292 0.90102 1.03867 1.21745 1.02885 0.93558 1.09301 1.20502 0.97680 0.94316 0.99237 1.21122 0.97453 0.98027 1.06530 1.17573 0.91213 0.91164 0.90244 1.19548 1.13992 1.01088 1.14373 0.90175 1.25941 0.98830 0.94040 0.95619 1.69782 1.36574 1.14066 1.20852 0.86333 0.82026 0.79269 0.78938 1.18723 1.20268 1.18974 1.21534 0.96397 0.95737 0.97926 1.22641 0.89066 0.97282 0.94908 1.21876 0.99245 0.91717 0.94919 1.23864 0.95201 0.94714 0.99359 1.77387 1.01705 1.08146 1.24631 0.90985 0.89597 0.89361 0.81170 0.94104 0.90612 0.93697 0.91430 0.90508 0.90863 0.92552 0.89625 0.84779 0.88937 0.88786 0.90523 0.85410 0.91199 0.85459 0.89540 0.94417 0.80184 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.55 11.47 59.85 0.69 1.24 16 2 N -0.38 -3.66 4.01 -68.16 -0.27 -3.93 16 3 C 0.07 0.63 11.40 -17.22 -0.20 0.44 16 4 C -0.23 -2.33 4.94 -105.05 -0.52 -2.85 16 5 C 0.14 1.37 5.44 -4.98 -0.03 1.35 16 6 N -0.56 -6.38 3.84 -240.92 -0.93 -7.30 16 7 C 0.07 0.84 5.32 -5.05 -0.03 0.82 16 8 C -0.13 -1.40 5.79 -27.16 -0.16 -1.55 16 9 C 0.11 1.63 6.19 -3.02 -0.02 1.61 16 10 N -0.61 -10.65 2.18 -173.55 -0.38 -11.03 16 11 C 0.56 12.59 7.45 -12.31 -0.09 12.50 16 12 O -0.55 -13.98 15.92 5.33 0.08 -13.90 16 13 C -0.12 -2.94 5.61 -105.04 -0.59 -3.53 16 14 C -0.26 -5.30 7.11 -38.92 -0.28 -5.58 16 15 C -0.10 -2.09 10.01 -39.73 -0.40 -2.49 16 16 C -0.21 -5.03 9.78 -38.81 -0.38 -5.41 16 17 C 0.10 2.68 5.56 -106.87 -0.59 2.08 16 18 C -0.46 -12.23 9.05 -37.73 -0.34 -12.57 16 19 H 0.08 2.02 7.91 -52.48 -0.41 1.60 16 20 C 0.07 1.90 5.13 -17.34 -0.09 1.81 16 21 N -0.79 -20.97 10.99 55.55 0.61 -20.36 16 22 Si 0.91 19.04 29.59 -169.99 -5.03 14.00 16 23 H -0.26 -5.48 7.11 56.52 0.40 -5.08 16 24 H -0.28 -5.69 7.11 56.52 0.40 -5.28 16 25 H -0.27 -5.40 7.11 56.52 0.40 -5.00 16 26 C -0.10 -2.58 8.23 -38.44 -0.32 -2.89 16 27 C 0.08 1.29 5.00 -3.97 -0.02 1.27 16 28 C 0.05 0.70 3.60 -5.74 -0.02 0.68 16 29 C 0.06 0.63 10.36 -17.36 -0.18 0.45 16 30 N -0.30 -3.67 12.58 30.63 0.39 -3.28 16 31 H 0.07 0.29 8.14 -51.93 -0.42 -0.13 16 32 H 0.09 0.26 8.14 -51.93 -0.42 -0.16 16 33 H 0.09 0.47 8.14 -51.93 -0.42 0.05 16 34 H 0.17 1.00 8.06 -52.49 -0.42 0.58 16 35 H 0.04 0.42 8.11 -51.93 -0.42 0.00 16 36 H 0.08 0.62 7.57 -51.93 -0.39 0.23 16 37 H 0.04 0.65 7.32 -51.93 -0.38 0.27 16 38 H 0.07 0.63 7.36 -51.93 -0.38 0.25 16 39 H 0.08 0.83 7.98 -51.93 -0.41 0.42 16 40 H 0.07 0.66 8.14 -51.92 -0.42 0.24 16 41 H 0.06 0.78 8.14 -51.93 -0.42 0.36 16 42 H 0.09 1.40 6.93 -51.93 -0.36 1.04 16 43 H 0.14 2.34 2.08 -52.49 -0.11 2.23 16 44 H 0.09 1.66 8.06 -52.49 -0.42 1.24 16 45 H 0.09 2.09 8.06 -52.48 -0.42 1.67 16 46 H 0.28 6.95 8.30 -40.82 -0.34 6.61 16 47 H 0.13 3.74 6.01 -52.48 -0.32 3.42 16 48 H 0.07 0.98 8.11 -51.93 -0.42 0.56 16 49 H 0.13 2.19 4.27 -52.09 -0.22 1.97 16 50 H 0.09 1.12 5.58 -51.93 -0.29 0.83 16 51 H 0.04 0.60 7.09 -51.93 -0.37 0.23 16 52 H 0.18 1.82 8.05 -52.49 -0.42 1.40 16 LS Contribution 405.44 15.07 6.11 6.11 Total: -1.00 -32.37 405.44 -10.41 -42.77 By element: Atomic # 1 Polarization: 16.98 SS G_CDS: -7.43 Total: 9.55 kcal Atomic # 6 Polarization: -9.08 SS G_CDS: -3.56 Total: -12.64 kcal Atomic # 7 Polarization: -45.32 SS G_CDS: -0.58 Total: -45.90 kcal Atomic # 8 Polarization: -13.98 SS G_CDS: 0.08 Total: -13.90 kcal Atomic # 14 Polarization: 19.04 SS G_CDS: -5.03 Total: 14.00 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -32.37 -10.41 -42.77 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000069771445.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 164.686 kcal (2) G-P(sol) polarization free energy of solvation -32.366 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 132.320 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.405 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.771 kcal (6) G-S(sol) free energy of system = (1) + (5) 121.915 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.59 seconds