Wall clock time and date at job start Tue Mar 31 2020 06:17:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.45198 * 109.47241 * 2 1 4 4 C 1.34631 * 117.00043 * 179.97438 * 3 2 1 5 5 O 1.21515 * 120.00232 * 0.02562 * 4 3 2 6 6 N 1.34774 * 120.00266 * 180.02562 * 4 3 2 7 7 C 1.47080 * 120.88494 * 180.02562 * 6 4 3 8 8 C 1.53237 * 108.51961 * 231.20724 * 7 6 4 9 9 N 1.46903 * 109.34203 * 306.16605 * 8 7 6 10 10 C 1.46900 * 111.00366 * 187.25663 * 9 8 7 11 11 C 1.50697 * 109.47164 * 169.99961 * 10 9 8 12 12 C 1.38112 * 120.02780 * 259.99948 * 11 10 9 13 13 C 1.38386 * 120.05132 * 180.02562 * 12 11 10 14 14 Cl 1.73603 * 119.94014 * 180.02562 * 13 12 11 15 15 C 1.38423 * 120.11662 * 359.97150 * 13 12 11 16 16 C 1.38062 * 120.05684 * 0.02562 * 15 13 12 17 17 C 1.38859 * 120.02724 * 80.25337 * 11 10 9 18 18 O 1.35765 * 120.05437 * 0.02562 * 17 11 10 19 19 C 1.34827 * 116.99476 * 174.61104 * 18 17 11 20 20 H 1.07994 * 120.00467 * 5.07732 * 19 18 17 21 21 C 1.38651 * 119.99996 * 185.07971 * 19 18 17 22 22 N 1.31563 * 119.99469 * 359.97438 * 21 19 18 23 23 Si 1.86799 * 120.00346 * 180.02562 * 21 19 18 24 24 H 1.48499 * 109.46718 * 359.97438 * 23 21 19 25 25 H 1.48501 * 109.47337 * 119.99739 * 23 21 19 26 26 H 1.48497 * 109.46987 * 239.99879 * 23 21 19 27 27 C 1.46902 * 111.26739 * 63.10275 * 9 8 7 28 28 C 1.47081 * 120.88172 * 0.02562 * 6 4 3 29 29 H 1.08999 * 109.47173 * 60.00172 * 1 2 3 30 30 H 1.08997 * 109.47240 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47495 * 300.00215 * 1 2 3 32 32 H 1.08993 * 109.47085 * 239.99777 * 2 1 3 33 33 H 1.09005 * 109.46522 * 119.99995 * 2 1 3 34 34 H 1.09000 * 109.62995 * 111.49541 * 7 6 4 35 35 H 1.08997 * 109.78682 * 351.00830 * 7 6 4 36 36 H 1.08998 * 109.49157 * 186.20835 * 8 7 6 37 37 H 1.09003 * 109.51887 * 66.14151 * 8 7 6 38 38 H 1.08997 * 109.47088 * 49.99613 * 10 9 8 39 39 H 1.09002 * 109.46615 * 290.00102 * 10 9 8 40 40 H 1.07997 * 119.96881 * 359.97438 * 12 11 10 41 41 H 1.08002 * 119.97474 * 179.97438 * 15 13 12 42 42 H 1.08001 * 120.03443 * 179.97438 * 16 15 13 43 43 H 0.97008 * 119.99309 * 179.97438 * 22 21 19 44 44 H 1.09000 * 109.49007 * 56.86012 * 27 9 8 45 45 H 1.09003 * 109.49131 * 176.93356 * 27 9 8 46 46 H 1.09003 * 109.62765 * 248.50703 * 28 6 4 47 47 H 1.09007 * 109.62769 * 8.88575 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3488 1.5453 0.0005 5 8 4.0890 0.5817 0.0005 6 7 3.8640 2.7907 0.0011 7 6 5.3189 3.0058 0.0011 8 6 5.6673 3.9770 1.1341 9 7 4.8593 5.1960 0.9957 10 6 5.2837 6.2212 1.9584 11 6 4.6103 7.5286 1.6296 12 6 5.2983 8.5052 0.9365 13 6 4.6806 9.7062 0.6347 14 17 5.5478 10.9316 -0.2372 15 6 3.3720 9.9318 1.0258 16 6 2.6799 8.9587 1.7188 17 6 3.2994 7.7544 2.0277 18 8 2.6229 6.7981 2.7140 19 6 1.3952 7.1228 3.1670 20 1 0.9590 8.0764 2.9087 21 6 0.6927 6.2325 3.9647 22 7 1.2239 5.0707 4.2790 23 14 -1.0086 6.6820 4.5917 24 1 -1.3761 8.0341 4.0997 25 1 -1.9965 5.6895 4.0977 26 1 -1.0052 6.6802 6.0767 27 6 3.4263 4.9040 1.1349 28 6 2.9861 3.9708 0.0017 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3634 0.5139 0.8899 32 1 1.8933 -0.5138 -0.8899 33 1 1.8933 -0.5139 0.8901 34 1 5.6261 3.4320 -0.9539 35 1 5.8321 2.0576 0.1609 36 1 6.7253 4.2339 1.0804 37 1 5.4554 3.5072 2.0945 38 1 6.3652 6.3456 1.9035 39 1 5.0043 5.9117 2.9655 40 1 6.3194 8.3318 0.6306 41 1 2.8923 10.8701 0.7895 42 1 1.6591 9.1352 2.0242 43 1 0.7325 4.4480 4.8374 44 1 3.2452 4.4211 2.0952 45 1 2.8590 5.8333 1.0820 46 1 3.0694 4.4896 -0.9534 47 1 1.9537 3.6591 0.1602 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000070020480.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:17:31 Heat of formation + Delta-G solvation = -72.457687 kcal Electronic energy + Delta-G solvation = -32207.492284 eV Core-core repulsion = 27803.522667 eV Total energy + Delta-G solvation = -4403.969617 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 368.134 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -40.45199 -39.68645 -38.12982 -36.91928 -36.34116 -35.61887 -34.51082 -32.46088 -31.82459 -31.07527 -30.64993 -28.94604 -27.46801 -25.56751 -24.46183 -23.59565 -23.03426 -21.84786 -21.40649 -20.54265 -19.58600 -18.19852 -17.84559 -17.09713 -16.84421 -16.52232 -15.52746 -15.26973 -15.15051 -14.69540 -14.66103 -14.59494 -14.41274 -14.15418 -13.68889 -13.57901 -13.34990 -13.19780 -13.01669 -12.77185 -12.48099 -12.39667 -12.08131 -11.89824 -11.83468 -11.58062 -11.52738 -11.24701 -11.18176 -11.08045 -11.00643 -10.90342 -10.55902 -10.52976 -10.43449 -10.42783 -10.32529 -10.15114 -9.53894 -8.95388 -8.61446 -8.37714 -7.82294 -7.32640 -6.62943 -4.21377 1.89666 2.01069 2.29644 2.77603 3.00015 3.01722 3.04989 3.09522 3.81750 3.99264 4.14282 4.54215 4.89562 4.94111 4.98344 5.01175 5.12034 5.23957 5.26993 5.30686 5.40574 5.48631 5.52499 5.59627 5.68583 5.75817 5.76733 5.80912 5.89226 5.94895 5.95815 6.08388 6.08875 6.18377 6.34968 6.42276 6.53098 6.58361 6.68041 6.79109 6.82613 6.96568 7.05143 7.16238 7.38408 7.48843 7.51970 7.59642 7.80990 8.45249 8.83093 9.44452 10.52886 Molecular weight = 368.13amu Principal moments of inertia in cm(-1) A = 0.007265 B = 0.003740 C = 0.002698 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3853.113058 B = 7484.711206 C =10376.499863 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.083 3.917 3 O -0.365 6.365 4 C 0.652 3.348 5 O -0.587 6.587 6 N -0.591 5.591 7 C 0.136 3.864 8 C 0.038 3.962 9 N -0.533 5.533 10 C 0.115 3.885 11 C -0.142 4.142 12 C -0.047 4.047 13 C -0.122 4.122 14 Cl -0.106 7.106 15 C -0.061 4.061 16 C -0.222 4.222 17 C 0.156 3.844 18 O -0.162 6.162 19 C -0.397 4.397 20 H 0.093 0.907 21 C 0.047 3.953 22 N -0.852 5.852 23 Si 0.937 3.063 24 H -0.266 1.266 25 H -0.275 1.275 26 H -0.276 1.276 27 C 0.039 3.961 28 C 0.118 3.882 29 H 0.066 0.934 30 H 0.079 0.921 31 H 0.069 0.931 32 H 0.066 0.934 33 H 0.068 0.932 34 H 0.076 0.924 35 H 0.093 0.907 36 H 0.085 0.915 37 H 0.039 0.961 38 H 0.072 0.928 39 H 0.050 0.950 40 H 0.122 0.878 41 H 0.117 0.883 42 H 0.136 0.864 43 H 0.271 0.729 44 H 0.060 0.940 45 H 0.112 0.888 46 H 0.070 0.930 47 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.587 -2.188 -6.875 7.665 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C 0.009 3.991 3 O -0.279 6.279 4 C 0.407 3.593 5 O -0.477 6.477 6 N -0.331 5.331 7 C 0.015 3.985 8 C -0.091 4.091 9 N -0.258 5.258 10 C -0.012 4.012 11 C -0.144 4.144 12 C -0.066 4.066 13 C -0.149 4.149 14 Cl -0.078 7.078 15 C -0.080 4.080 16 C -0.242 4.242 17 C 0.102 3.898 18 O -0.065 6.065 19 C -0.473 4.473 20 H 0.111 0.889 21 C -0.159 4.159 22 N -0.486 5.486 23 Si 0.762 3.238 24 H -0.191 1.191 25 H -0.201 1.201 26 H -0.202 1.202 27 C -0.088 4.088 28 C -0.004 4.004 29 H 0.085 0.915 30 H 0.097 0.903 31 H 0.088 0.912 32 H 0.085 0.915 33 H 0.086 0.914 34 H 0.094 0.906 35 H 0.112 0.888 36 H 0.103 0.897 37 H 0.057 0.943 38 H 0.090 0.910 39 H 0.068 0.932 40 H 0.140 0.860 41 H 0.135 0.865 42 H 0.153 0.847 43 H 0.081 0.919 44 H 0.078 0.922 45 H 0.130 0.870 46 H 0.088 0.912 47 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 2.873 -2.720 -7.202 8.217 hybrid contribution -1.001 0.106 1.087 1.481 sum 1.872 -2.614 -6.115 6.909 Atomic orbital electron populations 1.21823 0.92687 1.02750 1.03800 1.22888 0.94791 0.79096 1.02372 1.86276 1.22133 1.32647 1.86885 1.17974 0.81113 0.84030 0.76171 1.90935 1.59917 1.39570 1.57310 1.47030 1.07666 1.03236 1.75149 1.21697 0.77868 0.99675 0.99291 1.22474 0.98306 0.90980 0.97291 1.62156 1.04287 1.08108 1.51230 1.20651 0.97840 0.88472 0.94214 1.18686 0.92504 0.96751 1.06468 1.20381 0.99087 0.90937 0.96202 1.20308 0.94221 0.91975 1.08372 1.98283 1.77381 1.55823 1.76332 1.20638 0.92174 0.98648 0.96536 1.21089 1.01814 0.94705 1.06585 1.19172 0.90762 0.88360 0.91536 1.84108 1.29206 1.33249 1.59888 1.21378 0.90157 1.04505 1.31283 0.88929 1.25225 0.99776 0.95024 0.95853 1.70014 1.37709 1.06937 1.33943 0.85700 0.80389 0.78916 0.78822 1.19054 1.20067 1.20176 1.22831 0.87863 1.00977 0.97176 1.21977 0.93928 0.84712 0.99809 0.91529 0.90260 0.91190 0.91518 0.91380 0.90560 0.88845 0.89708 0.94308 0.90950 0.93217 0.85965 0.86487 0.84657 0.91933 0.92182 0.87045 0.91174 0.88989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.53 10.29 37.16 0.38 -1.14 16 2 C 0.08 1.06 6.19 37.16 0.23 1.29 16 3 O -0.37 -5.94 8.90 -40.30 -0.36 -6.30 16 4 C 0.65 11.47 8.44 54.05 0.46 11.93 16 5 O -0.59 -11.23 15.59 -19.28 -0.30 -11.53 16 6 N -0.59 -9.72 3.01 -178.24 -0.54 -10.25 16 7 C 0.14 1.94 6.59 -3.60 -0.02 1.91 16 8 C 0.04 0.56 5.62 -3.70 -0.02 0.54 16 9 N -0.53 -8.87 4.62 -235.74 -1.09 -9.96 16 10 C 0.12 1.97 4.99 -4.98 -0.02 1.94 16 11 C -0.14 -2.61 5.17 -104.44 -0.54 -3.15 16 12 C -0.05 -0.78 9.45 -39.57 -0.37 -1.15 16 13 C -0.12 -2.03 6.32 -39.46 -0.25 -2.28 16 14 Cl -0.11 -1.57 28.95 -51.86 -1.50 -3.07 16 15 C -0.06 -1.04 9.82 -39.58 -0.39 -1.43 16 16 C -0.22 -4.28 9.17 -39.40 -0.36 -4.64 16 17 C 0.16 3.24 5.37 -39.11 -0.21 3.03 16 18 O -0.16 -3.82 5.96 0.01 0.00 -3.82 16 19 C -0.40 -9.66 9.49 30.88 0.29 -9.37 16 20 H 0.09 2.12 5.20 -52.49 -0.27 1.85 16 21 C 0.05 1.15 5.49 -17.51 -0.10 1.05 16 22 N -0.85 -22.23 13.67 55.48 0.76 -21.47 16 23 Si 0.94 18.87 29.55 -169.99 -5.02 13.85 16 24 H -0.27 -5.18 7.11 56.52 0.40 -4.77 16 25 H -0.28 -5.49 7.11 56.52 0.40 -5.09 16 26 H -0.28 -5.57 7.11 56.52 0.40 -5.17 16 27 C 0.04 0.74 4.25 -3.69 -0.02 0.73 16 28 C 0.12 1.98 6.62 -3.59 -0.02 1.95 16 29 H 0.07 0.64 8.14 -51.93 -0.42 0.22 16 30 H 0.08 0.59 8.14 -51.93 -0.42 0.17 16 31 H 0.07 0.76 8.14 -51.93 -0.42 0.33 16 32 H 0.07 0.79 8.14 -51.93 -0.42 0.37 16 33 H 0.07 0.87 8.14 -51.93 -0.42 0.45 16 34 H 0.08 0.98 8.14 -51.93 -0.42 0.56 16 35 H 0.09 1.31 7.07 -51.93 -0.37 0.95 16 36 H 0.08 1.01 7.99 -51.93 -0.41 0.59 16 37 H 0.04 0.63 8.14 -51.93 -0.42 0.21 16 38 H 0.07 1.05 7.83 -51.93 -0.41 0.64 16 39 H 0.05 0.98 7.83 -51.93 -0.41 0.57 16 40 H 0.12 1.79 8.04 -52.49 -0.42 1.37 16 41 H 0.12 1.75 8.06 -52.49 -0.42 1.33 16 42 H 0.14 2.59 5.64 -52.49 -0.30 2.30 16 43 H 0.27 6.64 8.31 -40.82 -0.34 6.30 16 44 H 0.06 1.36 8.04 -51.93 -0.42 0.95 16 45 H 0.11 2.37 4.35 -51.93 -0.23 2.14 16 46 H 0.07 1.09 8.14 -51.93 -0.42 0.67 16 47 H 0.09 1.59 6.98 -51.93 -0.36 1.23 16 LS Contribution 395.29 15.07 5.96 5.96 Total: -1.00 -27.65 395.29 -9.59 -37.24 By element: Atomic # 1 Polarization: 14.68 SS G_CDS: -6.53 Total: 8.15 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -0.97 Total: 1.21 kcal Atomic # 7 Polarization: -40.82 SS G_CDS: -0.87 Total: -41.68 kcal Atomic # 8 Polarization: -21.00 SS G_CDS: -0.66 Total: -21.66 kcal Atomic # 14 Polarization: 18.87 SS G_CDS: -5.02 Total: 13.85 kcal Atomic # 17 Polarization: -1.57 SS G_CDS: -1.50 Total: -3.07 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -27.65 -9.59 -37.24 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000070020480.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.214 kcal (2) G-P(sol) polarization free energy of solvation -27.653 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.867 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.591 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.244 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.458 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds