Wall clock time and date at job start Tue Mar 31 2020 06:27:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38270 * 119.94062 * 2 1 4 4 C 1.38292 * 120.16113 * 179.97438 * 3 2 1 5 5 C 1.38285 * 120.04508 * 359.75943 * 4 3 2 6 6 F 1.35098 * 120.05502 * 180.27923 * 5 4 3 7 7 C 1.39078 * 119.88935 * 0.51444 * 5 4 3 8 8 N 1.39846 * 120.08027 * 179.73939 * 7 5 4 9 9 C 1.46842 * 110.99659 * 115.77213 * 8 7 5 10 10 C 1.53044 * 109.52233 * 174.16261 * 9 8 7 11 11 C 1.53113 * 109.27674 * 59.17895 * 10 9 8 12 12 C 1.53117 * 109.15984 * 302.34467 * 11 10 9 13 13 H 1.09000 * 109.50553 * 297.67841 * 12 11 10 14 14 N 1.46506 * 109.50214 * 177.59698 * 12 11 10 15 15 S 1.65602 * 119.99580 * 95.00134 * 14 12 11 16 16 O 1.42097 * 104.28073 * 308.92876 * 15 14 12 17 17 O 1.42101 * 104.27498 * 181.07153 * 15 14 12 18 18 C 1.81396 * 104.45194 * 65.00093 * 15 14 12 19 19 C 1.53002 * 109.47393 * 179.97438 * 18 15 14 20 20 C 1.50696 * 109.46997 * 179.97438 * 19 18 15 21 21 H 1.07999 * 120.00319 * 0.02562 * 20 19 18 22 22 C 1.37885 * 119.99717 * 180.02562 * 20 19 18 23 23 N 1.31516 * 119.99913 * 180.02562 * 22 20 19 24 24 Si 1.86798 * 119.99766 * 0.02562 * 22 20 19 25 25 H 1.48500 * 109.47353 * 269.99586 * 24 22 20 26 26 H 1.48501 * 109.47293 * 30.00037 * 24 22 20 27 27 H 1.48504 * 109.46680 * 149.99835 * 24 22 20 28 28 C 1.46845 * 111.00157 * 351.56325 * 8 7 5 29 29 C 1.38152 * 119.94420 * 179.97438 * 2 1 3 30 30 H 1.08998 * 109.47274 * 270.02621 * 1 2 3 31 31 H 1.08999 * 109.47136 * 30.02620 * 1 2 3 32 32 H 1.09001 * 109.47019 * 150.02215 * 1 2 3 33 33 H 1.08003 * 119.92387 * 359.97348 * 3 2 1 34 34 H 1.07997 * 119.98049 * 180.02562 * 4 3 2 35 35 H 1.08998 * 109.46775 * 54.14263 * 9 8 7 36 36 H 1.09000 * 109.45623 * 294.16864 * 9 8 7 37 37 H 1.09002 * 109.50094 * 299.23395 * 10 9 8 38 38 H 1.09003 * 109.53350 * 179.13882 * 10 9 8 39 39 H 1.09007 * 109.51823 * 182.44141 * 11 10 9 40 40 H 1.08998 * 109.57542 * 62.28596 * 11 10 9 41 41 H 0.96998 * 120.00326 * 275.00288 * 14 12 11 42 42 H 1.09005 * 109.47123 * 59.99668 * 18 15 14 43 43 H 1.09002 * 109.47309 * 299.99670 * 18 15 14 44 44 H 1.09005 * 109.46767 * 60.00050 * 19 18 15 45 45 H 1.09002 * 109.47113 * 300.00390 * 19 18 15 46 46 H 0.97001 * 119.99646 * 179.97438 * 23 22 20 47 47 H 1.09003 * 109.46191 * 65.82106 * 28 8 7 48 48 H 1.09006 * 109.46039 * 305.85502 * 28 8 7 49 49 H 1.08001 * 120.02263 * 0.02562 * 29 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1971 1.1982 0.0000 4 6 3.5800 1.2035 0.0005 5 6 4.2770 0.0091 0.0061 6 9 5.6280 0.0141 0.0123 7 6 3.5849 -1.1972 0.0003 8 7 4.2858 -2.4074 0.0004 9 6 4.0284 -3.1643 1.2321 10 6 4.6916 -4.5402 1.1348 11 6 6.1982 -4.3617 0.9286 12 6 6.4375 -3.5292 -0.3340 13 1 6.0451 -4.0613 -1.2006 14 7 7.8749 -3.3052 -0.5071 15 16 8.7582 -4.3116 -1.4814 16 8 8.4314 -5.6170 -1.0251 17 8 10.0859 -3.8138 -1.3876 18 6 8.0900 -4.0329 -3.1446 19 6 8.8340 -4.9164 -4.1480 20 6 8.2783 -4.6852 -5.5295 21 1 7.4752 -3.9785 -5.6773 22 6 8.7954 -5.3760 -6.6050 23 7 8.3108 -5.1739 -7.8108 24 14 10.1841 -6.5989 -6.3493 25 1 11.4885 -5.9027 -6.4868 26 1 10.0793 -7.1900 -4.9910 27 1 10.0884 -7.6764 -7.3668 28 6 5.7238 -2.1827 -0.1941 29 6 2.1966 -1.1971 0.0005 30 1 -0.3634 0.0005 1.0276 31 1 -0.3633 0.8897 -0.5142 32 1 -0.3633 -0.8902 -0.5135 33 1 1.6549 2.1322 -0.0004 34 1 4.1161 2.1410 0.0010 35 1 2.9536 -3.2877 1.3648 36 1 4.4396 -2.6225 2.0838 37 1 4.2711 -5.0880 0.2914 38 1 4.5136 -5.0965 2.0552 39 1 6.6685 -5.3386 0.8154 40 1 6.6265 -3.8489 1.7897 41 1 8.3092 -2.5675 -0.0510 42 1 8.2195 -2.9855 -3.4174 43 1 7.0291 -4.2829 -3.1566 44 1 8.7048 -5.9639 -3.8754 45 1 9.8948 -4.6660 -4.1359 46 1 8.6748 -5.6597 -8.5675 47 1 6.1269 -1.6455 0.6644 48 1 5.8803 -1.5931 -1.0975 49 1 1.6561 -2.1321 0.0005 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000071910249.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:27:13 Heat of formation + Delta-G solvation = -79.348086 kcal Electronic energy + Delta-G solvation = -32179.914756 eV Core-core repulsion = 27762.751367 eV Total energy + Delta-G solvation = -4417.163389 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 370.151 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -49.46521 -40.40328 -38.72729 -36.69781 -35.64067 -35.41052 -33.93193 -33.22318 -32.40217 -31.46583 -30.19228 -28.97558 -26.94849 -25.96194 -24.75847 -23.73479 -22.19779 -21.47754 -21.34372 -20.36740 -19.01501 -17.93184 -17.69397 -17.30921 -16.83494 -16.57063 -16.19307 -15.74957 -15.49388 -15.39959 -14.91739 -14.74643 -14.48089 -14.30079 -14.18506 -14.04708 -13.93509 -13.84138 -13.62834 -13.54450 -12.83141 -12.76301 -12.47379 -12.20322 -12.13160 -11.92713 -11.87196 -11.75318 -11.71399 -11.64493 -11.42738 -11.22334 -11.18332 -11.09823 -11.08714 -10.65427 -10.42103 -10.15217 -9.91730 -9.74334 -9.46575 -9.15527 -9.00194 -8.64460 -8.15874 -6.14647 -4.15708 0.67887 0.78763 0.88338 2.88231 3.15044 3.27945 3.35139 3.39419 3.45301 3.91141 4.13187 4.32669 4.37479 4.42703 4.46157 4.55215 4.64615 4.69274 4.80238 4.82321 4.87597 5.00874 5.02383 5.15710 5.18128 5.21493 5.23993 5.35515 5.38842 5.45731 5.51426 5.54636 5.56976 5.58865 5.63435 5.72247 5.80357 5.85749 5.88666 6.12168 6.14966 6.18577 6.30874 6.35611 6.56898 6.83369 6.88881 6.94514 7.05001 7.56750 8.38827 8.86987 9.44999 10.97804 Molecular weight = 370.15amu Principal moments of inertia in cm(-1) A = 0.011323 B = 0.002536 C = 0.002315 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2472.185965 B =11040.015608 C =12093.505752 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.073 4.073 3 C -0.118 4.118 4 C -0.125 4.125 5 C 0.043 3.957 6 F -0.135 7.135 7 C 0.092 3.908 8 N -0.484 5.484 9 C 0.056 3.944 10 C -0.117 4.117 11 C -0.141 4.141 12 C 0.153 3.847 13 H 0.095 0.905 14 N -1.119 6.119 15 S 2.591 3.409 16 O -0.963 6.963 17 O -0.967 6.967 18 C -0.584 4.584 19 C -0.006 4.006 20 C -0.519 4.519 21 H 0.078 0.922 22 C 0.071 3.929 23 N -0.896 5.896 24 Si 0.869 3.131 25 H -0.271 1.271 26 H -0.262 1.262 27 H -0.282 1.282 28 C 0.036 3.964 29 C -0.108 4.108 30 H 0.072 0.928 31 H 0.069 0.931 32 H 0.070 0.930 33 H 0.131 0.869 34 H 0.135 0.865 35 H 0.083 0.917 36 H 0.043 0.957 37 H 0.079 0.921 38 H 0.077 0.923 39 H 0.087 0.913 40 H 0.065 0.935 41 H 0.413 0.587 42 H 0.127 0.873 43 H 0.125 0.875 44 H 0.033 0.967 45 H 0.028 0.972 46 H 0.266 0.734 47 H 0.069 0.931 48 H 0.096 0.904 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.805 11.356 22.083 29.435 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.074 4.074 3 C -0.137 4.137 4 C -0.144 4.144 5 C 0.021 3.979 6 F -0.114 7.114 7 C -0.007 4.007 8 N -0.200 5.200 9 C -0.069 4.069 10 C -0.156 4.156 11 C -0.181 4.181 12 C 0.044 3.956 13 H 0.113 0.887 14 N -0.875 5.875 15 S 2.688 3.312 16 O -0.953 6.953 17 O -0.958 6.958 18 C -0.717 4.717 19 C -0.046 4.046 20 C -0.558 4.558 21 H 0.096 0.904 22 C -0.131 4.131 23 N -0.534 5.534 24 Si 0.695 3.305 25 H -0.197 1.197 26 H -0.186 1.186 27 H -0.208 1.208 28 C -0.092 4.092 29 C -0.128 4.128 30 H 0.091 0.909 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.148 0.852 34 H 0.153 0.847 35 H 0.102 0.898 36 H 0.062 0.938 37 H 0.098 0.902 38 H 0.095 0.905 39 H 0.106 0.894 40 H 0.084 0.916 41 H 0.246 0.754 42 H 0.145 0.855 43 H 0.143 0.857 44 H 0.051 0.949 45 H 0.046 0.954 46 H 0.076 0.924 47 H 0.087 0.913 48 H 0.115 0.885 49 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -15.240 10.199 21.754 28.452 hybrid contribution 1.023 0.596 0.168 1.196 sum -14.217 10.795 21.922 28.271 Atomic orbital electron populations 1.20801 0.90491 1.03271 1.02531 1.19860 0.96490 0.92505 0.98525 1.20836 0.92941 0.98050 1.01908 1.21061 0.94968 0.96814 1.01599 1.17911 0.77022 0.94302 1.08679 1.91480 1.28620 1.96970 1.94287 1.18979 0.93524 0.87576 1.00584 1.59099 1.09163 1.15837 1.35951 1.22337 1.01458 0.94534 0.88532 1.21612 0.95165 0.95657 1.03161 1.22173 0.96159 1.02024 0.97715 1.20767 0.79661 0.95719 0.99410 0.88741 1.55796 1.17905 1.48884 1.64898 1.05596 0.74094 0.74023 0.77460 1.93547 1.84450 1.37941 1.79357 1.93560 1.35003 1.80475 1.86732 1.30307 1.12182 1.10756 1.18444 1.19402 0.95418 0.94203 0.95532 1.20856 1.20620 1.25590 0.88698 0.90399 1.24989 0.96616 0.96496 0.95022 1.69886 1.42264 1.42193 0.99039 0.86926 0.83009 0.81650 0.78872 1.19690 1.18601 1.20764 1.23251 0.85428 0.96833 1.03686 1.20598 0.91045 0.98593 1.02612 0.90932 0.91222 0.91128 0.85157 0.84720 0.89820 0.93830 0.90235 0.90469 0.89410 0.91648 0.75415 0.85500 0.85706 0.94915 0.95413 0.92400 0.91315 0.88545 0.84576 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.54 10.01 36.01 0.36 -0.18 16 2 C -0.07 -0.53 5.88 -104.64 -0.62 -1.14 16 3 C -0.12 -0.85 9.69 -39.55 -0.38 -1.23 16 4 C -0.13 -1.06 10.02 -39.54 -0.40 -1.46 16 5 C 0.04 0.44 6.95 -39.25 -0.27 0.17 16 6 F -0.13 -1.51 12.31 2.25 0.03 -1.48 16 7 C 0.09 0.92 5.48 -83.67 -0.46 0.47 16 8 N -0.48 -4.98 4.68 -171.07 -0.80 -5.78 16 9 C 0.06 0.47 5.32 -3.83 -0.02 0.45 16 10 C -0.12 -1.01 6.09 -26.65 -0.16 -1.18 16 11 C -0.14 -1.52 5.61 -26.61 -0.15 -1.67 16 12 C 0.15 1.80 2.72 -67.85 -0.18 1.62 16 13 H 0.09 1.17 7.15 -51.93 -0.37 0.80 16 14 N -1.12 -14.17 5.37 -4.82 -0.03 -14.19 16 15 S 2.59 44.07 5.38 -107.50 -0.58 43.49 16 16 O -0.96 -18.58 17.16 -57.54 -0.99 -19.57 16 17 O -0.97 -19.12 18.08 -57.54 -1.04 -20.16 16 18 C -0.58 -10.87 5.90 37.16 0.22 -10.65 16 19 C -0.01 -0.15 4.05 -27.88 -0.11 -0.26 16 20 C -0.52 -14.65 9.66 -34.44 -0.33 -14.99 16 21 H 0.08 2.32 7.99 -52.49 -0.42 1.90 16 22 C 0.07 2.08 5.47 -17.82 -0.10 1.98 16 23 N -0.90 -27.32 13.96 55.43 0.77 -26.55 16 24 Si 0.87 21.69 27.47 -169.99 -4.67 17.02 16 25 H -0.27 -6.62 7.11 56.52 0.40 -6.22 16 26 H -0.26 -6.31 6.54 56.52 0.37 -5.94 16 27 H -0.28 -6.88 7.11 56.52 0.40 -6.48 16 28 C 0.04 0.40 3.37 -3.84 -0.01 0.38 16 29 C -0.11 -0.90 8.87 -39.39 -0.35 -1.25 16 30 H 0.07 0.27 8.14 -51.93 -0.42 -0.15 16 31 H 0.07 0.27 8.08 -51.93 -0.42 -0.14 16 32 H 0.07 0.31 8.08 -51.93 -0.42 -0.11 16 33 H 0.13 0.63 8.06 -52.48 -0.42 0.21 16 34 H 0.13 0.92 8.06 -52.49 -0.42 0.50 16 35 H 0.08 0.57 7.17 -51.93 -0.37 0.20 16 36 H 0.04 0.36 8.14 -51.93 -0.42 -0.06 16 37 H 0.08 0.73 8.14 -51.93 -0.42 0.30 16 38 H 0.08 0.54 8.14 -51.93 -0.42 0.12 16 39 H 0.09 1.09 7.48 -51.93 -0.39 0.70 16 40 H 0.06 0.64 8.14 -51.93 -0.42 0.22 16 41 H 0.41 4.41 8.80 -34.47 -0.30 4.11 16 42 H 0.13 2.18 8.14 -51.92 -0.42 1.76 16 43 H 0.12 2.13 7.44 -51.92 -0.39 1.74 16 44 H 0.03 0.78 7.20 -51.93 -0.37 0.41 16 45 H 0.03 0.66 7.57 -51.93 -0.39 0.26 16 46 H 0.27 7.57 8.31 -40.82 -0.34 7.23 16 47 H 0.07 0.72 6.48 -51.93 -0.34 0.39 16 48 H 0.10 1.15 6.83 -51.93 -0.35 0.79 16 49 H 0.14 0.96 7.65 -52.49 -0.40 0.56 16 LS Contribution 401.46 15.07 6.05 6.05 Total: -1.00 -35.32 401.46 -11.71 -47.03 By element: Atomic # 1 Polarization: 10.58 SS G_CDS: -7.49 Total: 3.09 kcal Atomic # 6 Polarization: -25.97 SS G_CDS: -2.97 Total: -28.94 kcal Atomic # 7 Polarization: -46.47 SS G_CDS: -0.05 Total: -46.53 kcal Atomic # 8 Polarization: -37.70 SS G_CDS: -2.03 Total: -39.73 kcal Atomic # 9 Polarization: -1.51 SS G_CDS: 0.03 Total: -1.48 kcal Atomic # 14 Polarization: 21.69 SS G_CDS: -4.67 Total: 17.02 kcal Atomic # 16 Polarization: 44.07 SS G_CDS: -0.58 Total: 43.49 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -35.32 -11.71 -47.03 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000071910249.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.318 kcal (2) G-P(sol) polarization free energy of solvation -35.322 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.640 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.708 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.031 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.348 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds