Wall clock time and date at job start Tue Mar 31 2020 05:46:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 C 1.48528 * 111.00005 * 2 1 4 4 C 1.54941 * 103.22842 * 200.27918 * 3 2 1 5 5 C 1.54600 * 102.92074 * 37.41414 * 4 3 2 6 6 H 1.08994 * 110.39325 * 97.00276 * 5 4 3 7 7 N 1.46503 * 110.31037 * 219.13061 * 5 4 3 8 8 C 1.34777 * 119.99734 * 270.71353 * 7 5 4 9 9 O 1.21584 * 119.99772 * 0.02562 * 8 7 5 10 10 N 1.34772 * 119.99673 * 179.97438 * 8 7 5 11 11 C 1.40203 * 119.99747 * 180.02562 * 10 8 7 12 12 C 1.40393 * 125.97124 * 0.02562 * 11 10 8 13 13 C 1.35250 * 107.86628 * 179.74003 * 12 11 10 14 14 N 1.34968 * 107.85661 * 0.36886 * 13 12 11 15 15 C 1.46493 * 125.97272 * 179.89474 * 14 13 12 16 16 C 1.50706 * 109.47128 * 124.71436 * 15 14 13 17 17 H 1.08000 * 119.99302 * 359.97438 * 16 15 14 18 18 C 1.37871 * 120.00436 * 179.72498 * 16 15 14 19 19 N 1.31515 * 119.99684 * 359.97438 * 18 16 15 20 20 Si 1.86800 * 120.00405 * 180.02562 * 18 16 15 21 21 H 1.48496 * 109.46683 * 359.97438 * 20 18 16 22 22 H 1.48492 * 109.47426 * 119.99743 * 20 18 16 23 23 H 1.48501 * 109.46833 * 239.99986 * 20 18 16 24 24 N 1.31207 * 125.97102 * 179.97438 * 11 10 8 25 25 C 1.47902 * 111.00168 * 242.60288 * 2 1 3 26 26 H 1.09004 * 110.07867 * 26.39584 * 25 2 1 27 27 C 1.50698 * 109.91841 * 265.19949 * 25 2 1 28 28 C 1.38234 * 119.99919 * 322.13864 * 27 25 2 29 29 C 1.38233 * 120.00065 * 179.74368 * 28 27 25 30 30 C 1.38236 * 119.99934 * 0.55047 * 29 28 27 31 31 C 1.38234 * 120.00015 * 359.69441 * 30 29 28 32 32 C 1.38233 * 119.99973 * 0.03245 * 31 30 29 33 33 H 1.08999 * 109.47154 * 177.39440 * 1 2 3 34 34 H 1.09003 * 109.47261 * 297.39839 * 1 2 3 35 35 H 1.09007 * 109.47196 * 57.39509 * 1 2 3 36 36 H 1.09002 * 110.66680 * 318.71104 * 3 2 1 37 37 H 1.08999 * 110.66891 * 81.67630 * 3 2 1 38 38 H 1.08997 * 110.72459 * 279.05804 * 4 3 2 39 39 H 1.08995 * 110.72842 * 155.76938 * 4 3 2 40 40 H 0.97001 * 120.00128 * 90.71309 * 7 5 4 41 41 H 0.97001 * 120.00189 * 0.02562 * 10 8 7 42 42 H 1.08003 * 126.06941 * 359.97014 * 12 11 10 43 43 H 1.08007 * 126.06910 * 180.25860 * 13 12 11 44 44 H 1.09001 * 109.47786 * 4.71709 * 15 14 13 45 45 H 1.08998 * 109.47558 * 244.71572 * 15 14 13 46 46 H 0.97004 * 120.00247 * 180.02562 * 19 18 16 47 47 H 1.08003 * 119.99889 * 359.97438 * 28 27 25 48 48 H 1.08004 * 120.00061 * 180.27020 * 29 28 27 49 49 H 1.08005 * 120.00397 * 179.72589 * 30 29 28 50 50 H 1.07998 * 120.00110 * 180.02562 * 31 30 29 51 51 H 1.07995 * 120.00113 * 179.97438 * 32 31 30 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 2.0013 1.3866 0.0000 4 6 3.4492 1.2106 -0.5228 5 6 3.2983 0.1053 -1.5931 6 1 3.2143 0.5470 -2.5860 7 7 4.4390 -0.8125 -1.5406 8 6 5.5410 -0.5605 -2.2744 9 8 5.5886 0.4289 -2.9796 10 7 6.5905 -1.4045 -2.2257 11 6 7.7371 -1.1420 -2.9886 12 6 7.9265 -0.0429 -3.8414 13 6 9.1595 -0.1486 -4.3870 14 7 9.7291 -1.2744 -3.9076 15 6 11.0658 -1.7720 -4.2418 16 6 11.8590 -1.9704 -2.9758 17 1 11.4121 -1.7476 -2.0182 18 6 13.1533 -2.4412 -3.0398 19 7 13.6955 -2.7177 -4.2056 20 14 14.1362 -2.6878 -1.4706 21 1 13.3045 -2.3072 -0.3007 22 1 14.5326 -4.1140 -1.3536 23 1 15.3530 -1.8374 -1.5100 24 7 8.8211 -1.8802 -3.0298 25 6 1.9991 -0.6354 -1.2259 26 1 1.2771 -0.5433 -2.0373 27 6 2.2938 -2.0899 -0.9640 28 6 2.8191 -2.4803 0.2535 29 6 3.0845 -3.8151 0.4957 30 6 2.8352 -4.7582 -0.4838 31 6 2.3145 -4.3671 -1.7032 32 6 2.0439 -3.0330 -1.9433 33 1 -0.3633 -1.0266 -0.0467 34 1 -0.3634 0.4729 0.9124 35 1 -0.3634 0.5538 -0.8658 36 1 1.4237 2.0204 -0.6730 37 1 2.0013 1.7987 1.0091 38 1 4.1115 0.8835 0.2787 39 1 3.8123 2.1351 -0.9716 40 1 4.4011 -1.6016 -0.9777 41 1 6.5527 -2.1936 -1.6628 42 1 7.2154 0.7488 -4.0258 43 1 9.6079 0.5438 -5.0842 44 1 11.5741 -1.0486 -4.8793 45 1 10.9786 -2.7223 -4.7685 46 1 14.6060 -3.0492 -4.2507 47 1 3.0188 -1.7429 1.0169 48 1 3.4909 -4.1207 1.4485 49 1 3.0466 -5.8006 -0.2963 50 1 2.1193 -5.1039 -2.4683 51 1 1.6375 -2.7274 -2.8961 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000249027062.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:46:34 Heat of formation + Delta-G solvation = 103.447900 kcal Electronic energy + Delta-G solvation = -33118.710629 eV Core-core repulsion = 28827.501635 eV Total energy + Delta-G solvation = -4291.208994 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 369.191 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.08496 -40.40439 -39.18406 -38.35955 -34.88999 -34.45768 -33.30341 -32.21359 -31.43946 -31.12222 -30.46985 -29.22826 -27.92815 -26.58966 -25.68270 -23.33582 -22.96426 -22.69570 -22.06443 -21.21403 -20.44269 -20.11793 -19.72198 -18.09372 -17.38994 -16.65614 -16.54167 -16.19143 -16.06157 -15.45254 -15.38068 -15.24752 -14.88197 -14.63200 -14.50678 -14.17495 -14.11465 -13.83062 -13.59633 -13.47400 -12.99048 -12.81658 -12.76182 -12.58627 -12.30827 -12.19911 -12.14996 -12.07696 -11.72034 -11.61523 -11.43945 -11.24534 -11.04319 -10.98765 -10.85630 -10.36932 -10.23606 -10.03080 -9.64199 -9.44187 -9.19284 -9.16495 -8.96467 -8.92989 -8.61178 -8.04700 -7.36088 -6.21753 -4.26475 1.05385 1.15041 2.44805 2.71915 3.16155 3.23918 3.31355 3.38117 3.39360 3.57504 3.66878 3.88687 4.20478 4.25949 4.32878 4.42332 4.55177 4.64934 4.76284 4.80590 4.88297 4.93729 4.99713 5.05298 5.07997 5.13342 5.25575 5.32787 5.37524 5.46011 5.49450 5.56957 5.67292 5.70839 5.80142 5.85585 5.87332 6.18097 6.22433 6.28522 6.30794 6.37916 6.45381 6.57326 6.59310 6.66410 6.74611 6.91849 7.06113 7.16557 7.55581 7.73011 7.86832 8.03531 8.11347 8.66348 8.71545 8.84789 9.39032 10.86917 Molecular weight = 369.19amu Principal moments of inertia in cm(-1) A = 0.012570 B = 0.002079 C = 0.001951 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2227.063265 B =13463.281581 C =14349.717963 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 N -0.512 5.512 3 C 0.034 3.966 4 C -0.136 4.136 5 C 0.166 3.834 6 H 0.102 0.898 7 N -0.734 5.734 8 C 0.714 3.286 9 O -0.570 6.570 10 N -0.643 5.643 11 C 0.277 3.723 12 C -0.286 4.286 13 C 0.050 3.950 14 N -0.321 5.321 15 C 0.258 3.742 16 C -0.526 4.526 17 H 0.069 0.931 18 C 0.061 3.939 19 N -0.896 5.896 20 Si 0.907 3.093 21 H -0.271 1.271 22 H -0.281 1.281 23 H -0.282 1.282 24 N -0.308 5.308 25 C 0.097 3.903 26 H 0.073 0.927 27 C -0.073 4.073 28 C -0.101 4.101 29 C -0.123 4.123 30 C -0.119 4.119 31 C -0.118 4.118 32 C -0.112 4.112 33 H 0.069 0.931 34 H 0.072 0.928 35 H 0.030 0.970 36 H 0.050 0.950 37 H 0.087 0.913 38 H 0.082 0.918 39 H 0.083 0.917 40 H 0.399 0.601 41 H 0.406 0.594 42 H 0.161 0.839 43 H 0.167 0.833 44 H 0.056 0.944 45 H 0.044 0.956 46 H 0.266 0.734 47 H 0.132 0.868 48 H 0.123 0.877 49 H 0.121 0.879 50 H 0.121 0.879 51 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -29.013 3.061 7.839 30.208 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 N -0.236 5.236 3 C -0.093 4.093 4 C -0.175 4.175 5 C 0.059 3.941 6 H 0.120 0.880 7 N -0.394 5.394 8 C 0.413 3.587 9 O -0.446 6.446 10 N -0.293 5.293 11 C 0.023 3.977 12 C -0.317 4.317 13 C -0.100 4.100 14 N -0.103 5.103 15 C 0.141 3.859 16 C -0.564 4.564 17 H 0.087 0.913 18 C -0.142 4.142 19 N -0.534 5.534 20 Si 0.734 3.266 21 H -0.196 1.196 22 H -0.207 1.207 23 H -0.208 1.208 24 N -0.139 5.139 25 C -0.012 4.012 26 H 0.091 0.909 27 C -0.074 4.074 28 C -0.119 4.119 29 C -0.141 4.141 30 C -0.137 4.137 31 C -0.136 4.136 32 C -0.130 4.130 33 H 0.088 0.912 34 H 0.090 0.910 35 H 0.049 0.951 36 H 0.068 0.932 37 H 0.106 0.894 38 H 0.100 0.900 39 H 0.102 0.898 40 H 0.238 0.762 41 H 0.240 0.760 42 H 0.178 0.822 43 H 0.184 0.816 44 H 0.074 0.926 45 H 0.062 0.938 46 H 0.076 0.924 47 H 0.150 0.850 48 H 0.141 0.859 49 H 0.139 0.861 50 H 0.139 0.861 51 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -27.964 2.525 7.968 29.186 hybrid contribution -0.077 0.071 0.280 0.299 sum -28.041 2.596 8.248 29.344 Atomic orbital electron populations 1.22518 0.87318 1.02246 1.01097 1.64623 1.08430 1.15042 1.35491 1.23264 0.94989 0.89361 1.01736 1.23011 0.96428 0.99357 0.98753 1.21534 0.83346 0.88679 1.00499 0.88031 1.45389 1.14961 1.29434 1.49586 1.15648 0.79667 0.82730 0.80664 1.90846 1.81228 1.28525 1.43973 1.41382 1.13010 1.27625 1.47266 1.18780 0.87275 0.95829 0.95813 1.21504 0.99112 1.03789 1.07322 1.22551 0.94375 0.92013 1.01066 1.49041 1.13961 1.16678 1.30617 1.19726 0.72342 0.96231 0.97617 1.21307 0.97505 1.44851 0.92764 0.91266 1.24950 0.97403 0.94867 0.96955 1.69930 1.15208 1.44523 1.23757 0.86280 0.79573 0.77889 0.82811 1.19566 1.20725 1.20787 1.77324 0.99016 1.21977 1.15588 1.21586 0.95977 0.91524 0.92148 0.90943 1.19514 0.99552 0.93705 0.94617 1.21087 0.98098 0.95977 0.96760 1.21251 1.00235 0.93181 0.99436 1.21219 0.98990 0.99746 0.93756 1.21128 0.99340 0.95869 0.97303 1.21020 1.00348 0.92956 0.98717 0.91228 0.90970 0.95150 0.93186 0.89419 0.89975 0.89838 0.76176 0.76002 0.82208 0.81593 0.92582 0.93772 0.92426 0.85003 0.85900 0.86085 0.86056 0.86299 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.10 9.40 60.06 0.56 0.66 16 2 N -0.51 -3.59 4.37 -232.16 -1.02 -4.61 16 3 C 0.03 0.22 6.56 -1.90 -0.01 0.21 16 4 C -0.14 -1.16 6.78 -24.87 -0.17 -1.33 16 5 C 0.17 1.57 3.31 -66.57 -0.22 1.35 16 6 H 0.10 1.08 7.56 -51.93 -0.39 0.69 16 7 N -0.73 -8.20 4.64 -57.35 -0.27 -8.46 16 8 C 0.71 10.92 8.53 -86.92 -0.74 10.18 16 9 O -0.57 -10.32 13.12 5.29 0.07 -10.25 16 10 N -0.64 -10.59 5.46 -15.51 -0.08 -10.68 16 11 C 0.28 5.75 8.11 -154.36 -1.25 4.50 16 12 C -0.29 -5.84 9.61 -39.84 -0.38 -6.22 16 13 C 0.05 1.02 11.44 -17.24 -0.20 0.82 16 14 N -0.32 -7.61 3.67 -62.56 -0.23 -7.84 16 15 C 0.26 6.66 6.26 -5.19 -0.03 6.62 16 16 C -0.53 -14.79 9.24 -34.44 -0.32 -15.11 16 17 H 0.07 2.02 7.81 -52.49 -0.41 1.61 16 18 C 0.06 1.69 5.46 -17.82 -0.10 1.59 16 19 N -0.90 -25.54 13.29 55.43 0.74 -24.80 16 20 Si 0.91 21.54 29.54 -169.99 -5.02 16.52 16 21 H -0.27 -6.46 7.11 56.52 0.40 -6.06 16 22 H -0.28 -6.58 7.11 56.52 0.40 -6.18 16 23 H -0.28 -6.56 7.11 56.52 0.40 -6.15 16 24 N -0.31 -7.26 12.42 31.44 0.39 -6.87 16 25 C 0.10 0.75 2.66 -67.80 -0.18 0.57 16 26 H 0.07 0.52 7.64 -51.93 -0.40 0.13 16 27 C -0.07 -0.60 3.61 -104.62 -0.38 -0.98 16 28 C -0.10 -0.83 7.54 -39.58 -0.30 -1.13 16 29 C -0.12 -0.97 10.05 -39.58 -0.40 -1.37 16 30 C -0.12 -0.95 10.05 -39.58 -0.40 -1.34 16 31 C -0.12 -0.96 10.05 -39.58 -0.40 -1.36 16 32 C -0.11 -0.93 9.68 -39.58 -0.38 -1.32 16 33 H 0.07 0.42 8.14 -51.93 -0.42 -0.01 16 34 H 0.07 0.36 8.14 -51.93 -0.42 -0.07 16 35 H 0.03 0.16 8.01 -51.93 -0.42 -0.26 16 36 H 0.05 0.30 7.96 -51.93 -0.41 -0.12 16 37 H 0.09 0.52 8.14 -51.93 -0.42 0.10 16 38 H 0.08 0.76 8.06 -51.93 -0.42 0.35 16 39 H 0.08 0.75 8.14 -51.93 -0.42 0.33 16 40 H 0.40 4.03 5.28 -40.82 -0.22 3.81 16 41 H 0.41 5.70 8.84 -40.82 -0.36 5.34 16 42 H 0.16 3.20 5.91 -52.48 -0.31 2.89 16 43 H 0.17 2.78 8.06 -52.48 -0.42 2.36 16 44 H 0.06 1.41 8.07 -51.93 -0.42 1.00 16 45 H 0.04 1.20 8.14 -51.93 -0.42 0.78 16 46 H 0.27 7.14 8.31 -40.82 -0.34 6.80 16 47 H 0.13 1.08 7.67 -52.48 -0.40 0.68 16 48 H 0.12 0.79 8.06 -52.48 -0.42 0.37 16 49 H 0.12 0.78 8.06 -52.48 -0.42 0.36 16 50 H 0.12 0.82 8.06 -52.49 -0.42 0.39 16 51 H 0.12 0.88 8.05 -52.49 -0.42 0.45 16 LS Contribution 418.25 15.07 6.30 6.30 Total: -1.00 -32.82 418.25 -11.93 -44.75 By element: Atomic # 1 Polarization: 17.09 SS G_CDS: -7.52 Total: 9.57 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -5.29 Total: -3.64 kcal Atomic # 7 Polarization: -62.79 SS G_CDS: -0.47 Total: -63.26 kcal Atomic # 8 Polarization: -10.32 SS G_CDS: 0.07 Total: -10.25 kcal Atomic # 14 Polarization: 21.54 SS G_CDS: -5.02 Total: 16.52 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -32.82 -11.93 -44.75 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000249027062.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 148.197 kcal (2) G-P(sol) polarization free energy of solvation -32.823 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 115.374 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.926 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.749 kcal (6) G-S(sol) free energy of system = (1) + (5) 103.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds