Wall clock time and date at job start Tue Mar 31 2020 05:03:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.46849 * 111.00377 * 2 1 4 4 C 1.53030 * 109.52597 * 185.84141 * 3 2 1 5 5 C 1.53203 * 109.29958 * 300.81924 * 4 3 2 6 6 C 1.53110 * 109.11697 * 57.62984 * 5 4 3 7 7 H 1.09000 * 109.50900 * 182.40368 * 6 5 4 8 8 C 1.53003 * 109.50338 * 62.32406 * 6 5 4 9 9 N 1.46504 * 109.47046 * 65.08149 * 8 6 5 10 10 C 1.34774 * 120.00240 * 180.02562 * 9 8 6 11 11 O 1.21691 * 119.99707 * 0.02562 * 10 9 8 12 12 C 1.46374 * 119.99951 * 179.97438 * 10 9 8 13 13 H 1.07991 * 120.00335 * 0.02562 * 12 10 9 14 14 C 1.40055 * 119.99881 * 180.02562 * 12 10 9 15 15 N 1.30678 * 119.99845 * 359.97438 * 14 12 10 16 16 Si 1.86794 * 120.00205 * 180.02562 * 14 12 10 17 17 H 1.48496 * 109.47341 * 180.02562 * 16 14 12 18 18 H 1.48510 * 109.46748 * 300.00101 * 16 14 12 19 19 H 1.48498 * 109.47206 * 59.99778 * 16 14 12 20 20 C 1.46848 * 111.00376 * 124.21030 * 2 1 3 21 21 H 1.09004 * 109.45868 * 294.17891 * 20 2 1 22 22 C 1.50702 * 109.45319 * 54.14669 * 20 2 1 23 23 C 1.38239 * 119.99720 * 39.77734 * 22 20 2 24 24 C 1.38235 * 119.99896 * 179.74296 * 23 22 20 25 25 C 1.38231 * 119.99811 * 0.53469 * 24 23 22 26 26 C 1.50705 * 120.00150 * 179.77001 * 25 24 23 27 27 F 1.39900 * 109.46652 * 269.97493 * 26 25 24 28 28 F 1.39907 * 109.46874 * 29.97083 * 26 25 24 29 29 F 1.39901 * 109.47398 * 149.97355 * 26 25 24 30 30 C 1.38234 * 120.00233 * 359.73976 * 25 24 23 31 31 C 1.38226 * 120.00416 * 220.05272 * 22 20 2 32 32 H 1.08997 * 109.47003 * 295.79331 * 1 2 3 33 33 H 1.09000 * 109.47049 * 55.78816 * 1 2 3 34 34 H 1.08994 * 109.47126 * 175.78679 * 1 2 3 35 35 H 1.09000 * 109.46087 * 305.85590 * 3 2 1 36 36 H 1.09003 * 109.46304 * 65.82865 * 3 2 1 37 37 H 1.08996 * 109.50498 * 60.76043 * 4 3 2 38 38 H 1.09002 * 109.50272 * 180.84281 * 4 3 2 39 39 H 1.09001 * 109.51178 * 297.75942 * 5 4 3 40 40 H 1.09005 * 109.57643 * 177.54398 * 5 4 3 41 41 H 1.08994 * 109.47262 * 305.07981 * 8 6 5 42 42 H 1.09000 * 109.47521 * 185.07759 * 8 6 5 43 43 H 0.97005 * 119.99919 * 359.97438 * 9 8 6 44 44 H 0.97001 * 119.99601 * 179.97438 * 15 14 12 45 45 H 1.08006 * 119.99809 * 359.97438 * 23 22 20 46 46 H 1.08003 * 120.00121 * 180.29796 * 24 23 22 47 47 H 1.07993 * 120.00183 * 180.02562 * 30 25 24 48 48 H 1.08001 * 119.99714 * 359.97438 * 31 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 1.9953 1.3709 0.0000 4 6 3.5181 1.3341 -0.1468 5 6 4.1196 0.5366 1.0147 6 6 3.5182 -0.8714 1.0208 7 1 3.9098 -1.4309 1.8703 8 6 3.8876 -1.5903 -0.2783 9 7 5.3379 -1.7909 -0.3300 10 6 5.8955 -2.4078 -1.3906 11 8 5.1943 -2.7979 -2.3055 12 6 7.3446 -2.6076 -1.4425 13 1 7.9669 -2.2611 -0.6308 14 6 7.9241 -3.2483 -2.5449 15 7 7.1710 -3.6681 -3.5269 16 14 9.7733 -3.5040 -2.6109 17 1 10.1321 -4.2001 -3.8725 18 1 10.4572 -2.1867 -2.5610 19 1 10.2008 -4.3278 -1.4516 20 6 1.9953 -0.7708 1.1337 21 1 1.7325 -0.2708 2.0660 22 6 1.3982 -2.1544 1.1203 23 6 1.2254 -2.8210 -0.0783 24 6 0.6826 -4.0923 -0.0901 25 6 0.3024 -4.6925 1.0956 26 6 -0.2941 -6.0764 1.0823 27 9 -1.6843 -5.9836 0.9558 28 9 0.2254 -6.7977 0.0019 29 9 0.0228 -6.7324 2.2766 30 6 0.4699 -4.0236 2.2937 31 6 1.0180 -2.7546 2.3060 32 1 -0.3633 0.4472 0.9253 33 1 -0.3633 0.5778 -0.8498 34 1 -0.3633 -1.0248 -0.0755 35 1 1.5635 1.9257 -0.8330 36 1 1.7326 1.8608 0.9376 37 1 3.7813 0.8567 -1.0906 38 1 3.9098 2.3512 -0.1317 39 1 3.8895 1.0351 1.9564 40 1 5.2006 0.4704 0.8912 41 1 3.5737 -0.9864 -1.1296 42 1 3.3857 -2.5572 -0.3139 43 1 5.8970 -1.4789 0.3988 44 1 7.5725 -4.1115 -4.2905 45 1 1.5180 -2.3501 -1.0052 46 1 0.5521 -4.6151 -1.0262 47 1 0.1733 -4.4927 3.2201 48 1 1.1493 -2.2322 3.2421 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000097097370.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:03:34 Heat of formation + Delta-G solvation = -160.776882 kcal Electronic energy + Delta-G solvation = -34939.623775 eV Core-core repulsion = 29965.088982 eV Total energy + Delta-G solvation = -4974.534794 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 370.161 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -50.20991 -47.72198 -47.67789 -40.66572 -38.59441 -37.02615 -34.47493 -33.39874 -32.51449 -31.74643 -31.14981 -29.95479 -27.17078 -26.70454 -25.81951 -24.73691 -23.21808 -22.95103 -22.03025 -21.07061 -19.64130 -18.74199 -18.54996 -18.43644 -18.38196 -17.07357 -16.45347 -15.73683 -15.49148 -15.30815 -14.93270 -14.78654 -14.61316 -14.48466 -14.30281 -14.25173 -14.13364 -14.05391 -13.89104 -13.83084 -13.75121 -13.41192 -13.26128 -13.05369 -12.78968 -12.63815 -12.35807 -12.25404 -12.13513 -11.79281 -11.56971 -11.26248 -11.24420 -11.18694 -11.00172 -10.82554 -10.52708 -10.39714 -10.18892 -10.18089 -10.15659 -9.12403 -8.96041 -8.78464 -8.39177 -7.53021 -7.34104 -6.12521 -4.57697 0.81920 1.22550 2.60876 3.18424 3.23397 3.25054 3.36285 3.65920 3.76736 3.97607 4.14693 4.36819 4.43916 4.66202 4.71987 4.74597 4.78259 4.90676 4.96155 5.06735 5.18541 5.24918 5.27022 5.31540 5.38417 5.50912 5.52942 5.57707 5.62549 5.68870 5.81760 5.82909 5.88005 5.92019 5.98392 6.03987 6.06405 6.17701 6.30646 6.38340 6.42305 6.66979 6.72870 6.86031 6.99058 7.01960 7.48206 8.00623 8.20270 8.39722 9.08308 9.62684 10.66991 10.87039 Molecular weight = 370.16amu Principal moments of inertia in cm(-1) A = 0.007568 B = 0.003306 C = 0.002500 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3699.012287 B = 8466.654783 C =11199.185905 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 N -0.531 5.531 3 C 0.061 3.939 4 C -0.122 4.122 5 C -0.113 4.113 6 C -0.089 4.089 7 H 0.077 0.923 8 C 0.139 3.861 9 N -0.768 5.768 10 C 0.556 3.444 11 O -0.580 6.580 12 C -0.548 4.548 13 H 0.065 0.935 14 C 0.089 3.911 15 N -0.768 5.768 16 Si 0.905 3.095 17 H -0.281 1.281 18 H -0.269 1.269 19 H -0.269 1.269 20 C 0.133 3.867 21 H 0.053 0.947 22 C -0.047 4.047 23 C -0.084 4.084 24 C -0.072 4.072 25 C -0.186 4.186 26 C 0.508 3.492 27 F -0.180 7.180 28 F -0.175 7.175 29 F -0.180 7.180 30 C -0.076 4.076 31 C -0.119 4.119 32 H 0.022 0.978 33 H 0.069 0.931 34 H 0.072 0.928 35 H 0.076 0.924 36 H 0.030 0.970 37 H 0.083 0.917 38 H 0.065 0.935 39 H 0.054 0.946 40 H 0.074 0.926 41 H 0.063 0.937 42 H 0.051 0.949 43 H 0.376 0.624 44 H 0.267 0.733 45 H 0.150 0.850 46 H 0.136 0.864 47 H 0.132 0.868 48 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.329 5.868 12.735 20.775 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 N -0.256 5.256 3 C -0.067 4.067 4 C -0.160 4.160 5 C -0.150 4.150 6 C -0.109 4.109 7 H 0.095 0.905 8 C 0.014 3.986 9 N -0.424 5.424 10 C 0.360 3.640 11 O -0.463 6.463 12 C -0.585 4.585 13 H 0.083 0.917 14 C -0.131 4.131 15 N -0.397 5.397 16 Si 0.730 3.270 17 H -0.206 1.206 18 H -0.194 1.194 19 H -0.194 1.194 20 C 0.024 3.976 21 H 0.070 0.930 22 C -0.047 4.047 23 C -0.102 4.102 24 C -0.090 4.090 25 C -0.187 4.187 26 C 0.454 3.546 27 F -0.162 7.162 28 F -0.156 7.156 29 F -0.161 7.161 30 C -0.094 4.094 31 C -0.137 4.137 32 H 0.041 0.959 33 H 0.088 0.912 34 H 0.091 0.909 35 H 0.094 0.906 36 H 0.048 0.952 37 H 0.101 0.899 38 H 0.083 0.917 39 H 0.073 0.927 40 H 0.093 0.907 41 H 0.082 0.918 42 H 0.069 0.931 43 H 0.207 0.793 44 H 0.078 0.922 45 H 0.168 0.832 46 H 0.154 0.846 47 H 0.150 0.850 48 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -15.744 5.225 11.421 20.139 hybrid contribution 0.840 0.070 1.151 1.427 sum -14.904 5.295 12.572 20.204 Atomic orbital electron populations 1.22441 0.87293 1.02702 1.00243 1.61837 1.07399 1.13815 1.42509 1.22084 0.96114 0.88299 1.00156 1.21669 0.93683 1.00064 1.00594 1.21589 1.01048 0.94524 0.97857 1.21433 0.92189 0.97123 1.00109 0.90515 1.21081 0.84035 0.98518 0.94922 1.46165 1.05291 1.66337 1.24608 1.18137 0.88883 0.76957 0.80038 1.90596 1.64001 1.53931 1.37752 1.20857 0.90975 1.40818 1.05855 0.91719 1.25678 0.99121 0.93532 0.94735 1.70014 1.35894 1.27999 1.05811 0.86490 0.83541 0.78995 0.78015 1.20611 1.19372 1.19371 1.20560 0.94714 0.89951 0.92381 0.92969 1.20002 0.95596 0.95789 0.93313 1.21276 0.96168 0.93372 0.99368 1.21035 0.95709 0.95272 0.97006 1.19941 1.08302 0.93692 0.96791 1.18360 0.75999 0.86678 0.73556 1.93208 1.30830 1.96495 1.95632 1.93217 1.86543 1.80115 1.55734 1.93177 1.92639 1.83259 1.47024 1.20782 0.97452 0.94635 0.96510 1.20931 0.99828 0.95011 0.97960 0.95945 0.91247 0.90936 0.90601 0.95185 0.89859 0.91657 0.92686 0.90731 0.91843 0.93080 0.79307 0.92172 0.83200 0.84594 0.85011 0.85223 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.21 9.09 60.06 0.55 0.75 16 2 N -0.53 -6.05 3.47 -236.33 -0.82 -6.88 16 3 C 0.06 0.64 5.46 -3.84 -0.02 0.61 16 4 C -0.12 -1.45 5.74 -26.61 -0.15 -1.61 16 5 C -0.11 -1.34 5.41 -26.57 -0.14 -1.49 16 6 C -0.09 -1.19 2.24 -90.54 -0.20 -1.39 16 7 H 0.08 1.00 8.14 -51.93 -0.42 0.58 16 8 C 0.14 2.56 3.80 -4.04 -0.02 2.54 16 9 N -0.77 -16.75 5.26 -61.72 -0.32 -17.07 16 10 C 0.56 15.72 7.75 -12.99 -0.10 15.61 16 11 O -0.58 -18.69 15.02 5.20 0.08 -18.61 16 12 C -0.55 -15.48 9.54 -35.63 -0.34 -15.82 16 13 H 0.06 1.67 7.85 -52.49 -0.41 1.26 16 14 C 0.09 2.49 5.50 -17.36 -0.10 2.40 16 15 N -0.77 -23.18 11.83 55.55 0.66 -22.53 16 16 Si 0.90 20.27 29.56 -169.99 -5.02 15.25 16 17 H -0.28 -6.16 7.11 56.52 0.40 -5.76 16 18 H -0.27 -5.84 7.11 56.52 0.40 -5.44 16 19 H -0.27 -5.87 7.11 56.52 0.40 -5.47 16 20 C 0.13 1.52 1.81 -68.87 -0.12 1.39 16 21 H 0.05 0.53 8.00 -51.93 -0.42 0.12 16 22 C -0.05 -0.56 3.51 -104.62 -0.37 -0.92 16 23 C -0.08 -1.13 5.61 -39.58 -0.22 -1.36 16 24 C -0.07 -0.95 9.40 -39.59 -0.37 -1.33 16 25 C -0.19 -2.31 5.45 -104.62 -0.57 -2.88 16 26 C 0.51 6.30 3.36 36.01 0.12 6.42 16 27 F -0.18 -2.18 17.30 2.25 0.04 -2.14 16 28 F -0.17 -2.39 16.46 2.25 0.04 -2.36 16 29 F -0.18 -2.21 16.46 2.25 0.04 -2.17 16 30 C -0.08 -0.82 9.40 -39.58 -0.37 -1.19 16 31 C -0.12 -1.25 9.67 -39.59 -0.38 -1.63 16 32 H 0.02 0.20 8.14 -51.93 -0.42 -0.23 16 33 H 0.07 0.61 8.09 -51.93 -0.42 0.19 16 34 H 0.07 0.74 5.93 -51.93 -0.31 0.43 16 35 H 0.08 0.74 8.09 -51.93 -0.42 0.32 16 36 H 0.03 0.28 8.14 -51.93 -0.42 -0.14 16 37 H 0.08 1.25 6.47 -51.93 -0.34 0.91 16 38 H 0.06 0.67 8.14 -51.93 -0.42 0.25 16 39 H 0.05 0.55 8.14 -51.93 -0.42 0.13 16 40 H 0.07 0.97 7.14 -51.93 -0.37 0.60 16 41 H 0.06 1.28 5.92 -51.93 -0.31 0.97 16 42 H 0.05 1.03 5.22 -51.93 -0.27 0.76 16 43 H 0.38 7.23 7.64 -40.82 -0.31 6.91 16 44 H 0.27 7.36 8.29 -40.82 -0.34 7.03 16 45 H 0.15 2.26 6.88 -52.48 -0.36 1.90 16 46 H 0.14 1.72 7.60 -52.48 -0.40 1.33 16 47 H 0.13 1.17 7.60 -52.49 -0.40 0.77 16 48 H 0.13 1.05 8.04 -52.49 -0.42 0.63 16 LS Contribution 388.92 15.07 5.86 5.86 Total: -1.00 -33.80 388.92 -8.68 -42.48 By element: Atomic # 1 Polarization: 14.45 SS G_CDS: -6.40 Total: 8.05 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: -2.82 Total: 0.12 kcal Atomic # 7 Polarization: -45.99 SS G_CDS: -0.49 Total: -46.47 kcal Atomic # 8 Polarization: -18.69 SS G_CDS: 0.08 Total: -18.61 kcal Atomic # 9 Polarization: -6.78 SS G_CDS: 0.11 Total: -6.67 kcal Atomic # 14 Polarization: 20.27 SS G_CDS: -5.02 Total: 15.25 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -33.80 -8.68 -42.48 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000097097370.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.294 kcal (2) G-P(sol) polarization free energy of solvation -33.805 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.099 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.678 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.482 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.777 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds