Wall clock time and date at job start Tue Mar 31 2020 05:00:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35987 * 117.00177 * 2 1 4 4 C 1.39267 * 119.86444 * 359.97438 * 3 2 1 5 5 C 1.37689 * 120.62243 * 180.02562 * 4 3 2 6 6 C 1.39097 * 119.98832 * 359.97438 * 5 4 3 7 7 N 1.37900 * 133.35148 * 179.97438 * 6 5 4 8 8 H 0.97004 * 125.07861 * 0.03104 * 7 6 5 9 9 C 1.36804 * 109.85198 * 179.78796 * 7 6 5 10 10 C 1.34244 * 109.93448 * 0.40784 * 9 7 6 11 11 C 1.50697 * 126.48969 * 179.86557 * 10 9 7 12 12 H 1.09001 * 109.47372 * 219.68982 * 11 10 9 13 13 C 1.50709 * 109.46881 * 99.69313 * 11 10 9 14 14 O 1.20825 * 119.99307 * 240.00300 * 13 11 10 15 15 O 1.34227 * 119.99890 * 59.99782 * 13 11 10 16 16 N 1.46896 * 109.47387 * 339.69507 * 11 10 9 17 17 C 1.46951 * 111.00239 * 179.97438 * 16 11 10 18 18 C 1.53055 * 109.36408 * 183.18292 * 17 16 11 19 19 N 1.46953 * 109.36514 * 301.59926 * 18 17 16 20 20 C 1.46906 * 110.99875 * 183.18861 * 19 18 17 21 21 C 1.50699 * 109.47140 * 170.00105 * 20 19 18 22 22 H 1.08003 * 119.99962 * 359.97438 * 21 20 19 23 23 C 1.37873 * 119.99861 * 180.02562 * 21 20 19 24 24 N 1.31522 * 120.00244 * 359.97438 * 23 21 20 25 25 Si 1.86803 * 119.99980 * 180.02562 * 23 21 20 26 26 H 1.48498 * 109.46946 * 59.99897 * 25 23 21 27 27 H 1.48506 * 109.46938 * 179.97438 * 25 23 21 28 28 H 1.48500 * 109.46921 * 299.99580 * 25 23 21 29 29 C 1.46951 * 110.88066 * 59.32047 * 19 18 17 30 30 C 1.46966 * 110.99706 * 303.79435 * 16 11 10 31 31 C 1.40618 * 119.52652 * 0.02562 * 6 5 4 32 32 C 1.38042 * 119.86705 * 180.02562 * 3 2 1 33 33 H 1.09000 * 109.47472 * 179.97438 * 1 2 3 34 34 H 1.08998 * 109.47315 * 299.99667 * 1 2 3 35 35 H 1.09006 * 109.47558 * 59.99923 * 1 2 3 36 36 H 1.08004 * 119.69256 * 0.04960 * 4 3 2 37 37 H 1.07999 * 120.00535 * 180.02562 * 5 4 3 38 38 H 1.07998 * 125.03516 * 180.29345 * 9 7 6 39 39 H 0.96700 * 116.99523 * 179.97438 * 15 13 11 40 40 H 1.09005 * 109.48678 * 63.21907 * 17 16 11 41 41 H 1.08996 * 109.50863 * 303.16254 * 17 16 11 42 42 H 1.09003 * 109.48634 * 181.63290 * 18 17 16 43 43 H 1.08998 * 109.50425 * 61.57881 * 18 17 16 44 44 H 1.09004 * 109.47040 * 290.00043 * 20 19 18 45 45 H 1.09000 * 109.47033 * 49.99995 * 20 19 18 46 46 H 0.96992 * 120.00038 * 179.97438 * 24 23 21 47 47 H 1.09005 * 109.48678 * 60.64401 * 29 19 18 48 48 H 1.09004 * 109.48825 * 180.70927 * 29 19 18 49 49 H 1.08998 * 109.48984 * 296.78002 * 30 16 11 50 50 H 1.09004 * 109.48230 * 56.82233 * 30 16 11 51 51 H 1.08003 * 120.19772 * 359.96839 * 32 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 1.2851 2.3779 -0.0005 5 6 1.8940 3.6128 -0.0011 6 6 3.2820 3.7037 -0.0005 7 7 4.1611 4.7661 -0.0013 8 1 3.9049 5.7017 -0.0020 9 6 5.4487 4.3037 0.0045 10 6 5.4529 2.9613 0.0002 11 6 6.6673 2.0689 0.0014 12 1 6.4940 1.2186 -0.6582 13 6 6.9257 1.5742 1.4013 14 8 7.9731 1.8274 1.9477 15 8 5.9921 0.8524 2.0410 16 7 7.8326 2.8272 -0.4728 17 6 9.0383 1.9872 -0.4845 18 6 10.2419 2.8328 -0.9074 19 7 9.9909 3.4074 -2.2364 20 6 11.1563 4.1657 -2.7108 21 6 10.9628 4.5295 -4.1603 22 1 10.0641 4.2273 -4.6776 23 6 11.9333 5.2473 -4.8264 24 7 13.0279 5.6149 -4.1966 25 14 11.6932 5.6990 -6.6230 26 1 10.4710 6.5304 -6.7652 27 1 12.8713 6.4654 -7.1025 28 1 11.5461 4.4606 -7.4293 29 6 8.7852 4.2474 -2.2248 30 6 7.5815 3.4022 -1.8018 31 6 4.0534 2.5280 0.0000 32 6 3.4251 1.2806 -0.0005 33 1 -0.3634 -1.0276 -0.0005 34 1 -0.3634 0.5138 0.8900 35 1 -0.3634 0.5139 -0.8900 36 1 0.2070 2.3130 -0.0001 37 1 1.2940 4.5108 -0.0011 38 1 6.3310 4.9264 0.0098 39 1 6.2036 0.5569 2.9372 40 1 8.9037 1.1676 -1.1905 41 1 9.2102 1.5832 0.5131 42 1 11.1322 2.2051 -0.9448 43 1 10.3934 3.6363 -0.1866 44 1 11.2635 5.0748 -2.1191 45 1 12.0537 3.5559 -2.6059 46 1 13.7109 6.1195 -4.6653 47 1 8.9198 5.0669 -1.5188 48 1 8.6135 4.6510 -3.2226 49 1 7.4300 2.5990 -2.5229 50 1 6.6910 4.0297 -1.7640 51 1 4.0143 0.3755 -0.0004 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000020715981.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:00:36 Heat of formation + Delta-G solvation = -32.773772 kcal Electronic energy + Delta-G solvation = -34645.170751 eV Core-core repulsion = 30125.305940 eV Total energy + Delta-G solvation = -4519.864811 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -41.69068 -40.35083 -39.44583 -38.47516 -36.15671 -35.92916 -35.16321 -32.85967 -32.05238 -30.50470 -30.16779 -29.03140 -28.22379 -27.12278 -26.52603 -24.41266 -23.30311 -22.82774 -21.92024 -21.70815 -21.27958 -19.73624 -19.13043 -18.29316 -17.85775 -17.76433 -16.65425 -16.50088 -16.26815 -15.92906 -15.91217 -15.58984 -15.35755 -14.56215 -14.54839 -14.26928 -14.16754 -14.00245 -13.84902 -13.67639 -13.49909 -13.26498 -12.98811 -12.84200 -12.74939 -12.37372 -12.24826 -12.05911 -12.02746 -11.70166 -11.38538 -11.11633 -11.05176 -10.91678 -10.81662 -10.79187 -10.61384 -10.57902 -10.27632 -10.12349 -9.68443 -9.62784 -9.13194 -8.41524 -8.22008 -8.15022 -7.66549 -7.17708 -5.99959 -4.01434 0.86752 1.42981 2.13152 2.46212 2.90453 2.96812 3.13576 3.34294 3.38554 3.41367 3.66286 4.01588 4.44180 4.46558 4.60667 4.70959 4.79604 4.86465 4.93225 5.01540 5.09221 5.16135 5.17123 5.21004 5.26920 5.35368 5.41062 5.47391 5.59778 5.61723 5.81498 5.83809 5.91890 5.92553 6.02791 6.09453 6.15154 6.26263 6.34104 6.49166 6.53379 6.59959 6.62186 6.68035 6.77868 7.12704 7.16922 7.25817 7.32940 7.38391 7.41007 7.82703 7.95805 8.13335 8.25289 8.59033 9.05960 9.62538 11.10760 Molecular weight = 373.18amu Principal moments of inertia in cm(-1) A = 0.012374 B = 0.002250 C = 0.002059 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2262.272802 B =12444.084527 C =13595.947249 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.319 6.319 3 C 0.097 3.903 4 C -0.181 4.181 5 C -0.090 4.090 6 C 0.064 3.936 7 N -0.594 5.594 8 H 0.418 0.582 9 C 0.106 3.894 10 C -0.185 4.185 11 C 0.176 3.824 12 H 0.082 0.918 13 C 0.488 3.512 14 O -0.496 6.496 15 O -0.511 6.511 16 N -0.521 5.521 17 C 0.047 3.953 18 C 0.061 3.939 19 N -0.539 5.539 20 C 0.194 3.806 21 C -0.507 4.507 22 H 0.062 0.938 23 C 0.055 3.945 24 N -0.898 5.898 25 Si 0.897 3.103 26 H -0.278 1.278 27 H -0.288 1.288 28 H -0.276 1.276 29 C 0.070 3.930 30 C 0.054 3.946 31 C -0.046 4.046 32 C -0.100 4.100 33 H 0.097 0.903 34 H 0.052 0.948 35 H 0.053 0.947 36 H 0.129 0.871 37 H 0.122 0.878 38 H 0.183 0.817 39 H 0.406 0.594 40 H 0.036 0.964 41 H 0.096 0.904 42 H 0.072 0.928 43 H 0.032 0.968 44 H -0.008 1.008 45 H 0.030 0.970 46 H 0.261 0.739 47 H 0.028 0.972 48 H 0.087 0.913 49 H 0.043 0.957 50 H 0.078 0.922 51 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.292 -7.154 12.722 30.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.233 6.233 3 C 0.052 3.948 4 C -0.200 4.200 5 C -0.111 4.111 6 C -0.041 4.041 7 N -0.197 5.197 8 H 0.255 0.745 9 C -0.023 4.023 10 C -0.193 4.193 11 C 0.066 3.934 12 H 0.100 0.900 13 C 0.329 3.671 14 O -0.382 6.382 15 O -0.322 6.322 16 N -0.247 5.247 17 C -0.080 4.080 18 C -0.067 4.067 19 N -0.265 5.265 20 C 0.069 3.931 21 C -0.545 4.545 22 H 0.080 0.920 23 C -0.146 4.146 24 N -0.538 5.538 25 Si 0.725 3.275 26 H -0.203 1.203 27 H -0.214 1.214 28 H -0.202 1.202 29 C -0.059 4.059 30 C -0.073 4.073 31 C -0.051 4.051 32 C -0.119 4.119 33 H 0.115 0.885 34 H 0.071 0.929 35 H 0.071 0.929 36 H 0.147 0.853 37 H 0.140 0.860 38 H 0.200 0.800 39 H 0.264 0.736 40 H 0.054 0.946 41 H 0.114 0.886 42 H 0.090 0.910 43 H 0.050 0.950 44 H 0.009 0.991 45 H 0.048 0.952 46 H 0.071 0.929 47 H 0.046 0.954 48 H 0.106 0.894 49 H 0.061 0.939 50 H 0.096 0.904 51 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -25.845 -6.918 12.438 29.505 hybrid contribution -0.193 0.748 -0.373 0.858 sum -26.038 -6.170 12.065 29.353 Atomic orbital electron populations 1.22993 0.78871 1.03669 1.01051 1.86081 1.20882 1.26809 1.89529 1.18576 0.91826 0.83954 1.00452 1.20867 0.99617 0.91464 1.08101 1.19743 0.90388 0.97621 1.03344 1.18145 0.91416 0.87209 1.07372 1.41810 1.04752 1.07879 1.65275 0.74486 1.21883 0.86576 0.94885 0.98916 1.19364 0.90542 0.92548 1.16826 1.19134 0.89513 0.95185 0.89605 0.90031 1.23266 0.80733 0.74335 0.88771 1.90668 1.26332 1.54028 1.67187 1.84567 1.47613 1.66009 1.33971 1.61923 1.01264 1.34468 1.27070 1.22542 0.89249 0.94463 1.01758 1.22004 0.96077 0.97691 0.90973 1.62298 1.05528 1.36617 1.22025 1.19693 0.87092 0.91180 0.95164 1.21117 1.04339 1.33573 0.95496 0.92004 1.24993 0.95206 0.96100 0.98349 1.69953 1.08256 1.38867 1.36703 0.86574 0.77369 0.78489 0.85025 1.20342 1.21412 1.20201 1.21982 0.89386 0.93565 1.00998 1.22463 0.99040 0.98598 0.87197 1.18546 0.91802 0.91602 1.03174 1.19578 0.90883 0.96850 1.04628 0.88503 0.92925 0.92888 0.85320 0.85958 0.79973 0.73605 0.94551 0.88609 0.90983 0.94952 0.99067 0.95222 0.92909 0.95358 0.89445 0.93902 0.90360 0.85061 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.17 9.81 101.05 0.99 1.16 16 2 O -0.32 -3.19 10.49 -19.70 -0.21 -3.40 16 3 C 0.10 1.03 6.68 -39.27 -0.26 0.77 16 4 C -0.18 -1.60 9.01 -39.40 -0.35 -1.95 16 5 C -0.09 -0.79 10.06 -39.46 -0.40 -1.19 16 6 C 0.06 0.67 7.27 -83.92 -0.61 0.06 16 7 N -0.59 -5.29 6.08 -10.63 -0.06 -5.36 16 8 H 0.42 2.44 8.96 -40.82 -0.37 2.07 16 9 C 0.11 1.14 9.25 -16.74 -0.15 0.98 16 10 C -0.18 -2.23 4.67 -102.70 -0.48 -2.71 16 11 C 0.18 2.29 2.50 -70.02 -0.18 2.11 16 12 H 0.08 1.03 8.14 -51.93 -0.42 0.61 16 13 C 0.49 6.31 7.32 36.01 0.26 6.57 16 14 O -0.50 -7.72 14.59 -18.75 -0.27 -7.99 16 15 O -0.51 -5.14 13.34 -39.25 -0.52 -5.66 16 16 N -0.52 -7.78 4.00 -229.27 -0.92 -8.70 16 17 C 0.05 0.77 5.21 -3.77 -0.02 0.75 16 18 C 0.06 1.18 5.61 -3.77 -0.02 1.16 16 19 N -0.54 -11.77 4.70 -235.91 -1.11 -12.87 16 20 C 0.19 5.09 4.72 -4.97 -0.02 5.07 16 21 C -0.51 -14.18 8.47 -34.44 -0.29 -14.47 16 22 H 0.06 1.70 7.13 -52.48 -0.37 1.33 16 23 C 0.05 1.55 5.46 -17.82 -0.10 1.46 16 24 N -0.90 -26.79 13.29 55.43 0.74 -26.06 16 25 Si 0.90 21.63 29.54 -169.99 -5.02 16.61 16 26 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 27 H -0.29 -6.90 7.11 56.52 0.40 -6.50 16 28 H -0.28 -6.60 7.11 56.52 0.40 -6.19 16 29 C 0.07 1.33 5.43 -3.77 -0.02 1.31 16 30 C 0.05 0.83 4.99 -3.77 -0.02 0.81 16 31 C -0.05 -0.55 6.35 -105.14 -0.67 -1.21 16 32 C -0.10 -1.16 10.03 -39.12 -0.39 -1.56 16 33 H 0.10 0.38 8.14 -51.93 -0.42 -0.04 16 34 H 0.05 0.25 7.65 -51.93 -0.40 -0.15 16 35 H 0.05 0.26 7.65 -51.93 -0.40 -0.14 16 36 H 0.13 0.81 6.26 -52.48 -0.33 0.48 16 37 H 0.12 0.76 8.06 -52.49 -0.42 0.34 16 38 H 0.18 1.90 7.37 -52.49 -0.39 1.51 16 39 H 0.41 2.38 9.10 45.56 0.41 2.79 16 40 H 0.04 0.59 8.14 -51.93 -0.42 0.17 16 41 H 0.10 1.56 5.30 -51.93 -0.28 1.28 16 42 H 0.07 1.36 8.07 -51.93 -0.42 0.94 16 43 H 0.03 0.65 8.14 -51.93 -0.42 0.22 16 44 H -0.01 -0.24 8.12 -51.93 -0.42 -0.66 16 45 H 0.03 0.84 8.03 -51.93 -0.42 0.42 16 46 H 0.26 7.39 8.31 -40.82 -0.34 7.05 16 47 H 0.03 0.55 8.14 -51.93 -0.42 0.13 16 48 H 0.09 1.78 6.79 -51.93 -0.35 1.43 16 49 H 0.04 0.69 8.14 -51.93 -0.42 0.27 16 50 H 0.08 1.05 5.11 -51.93 -0.27 0.78 16 51 H 0.13 1.49 8.06 -52.48 -0.42 1.07 16 LS Contribution 408.99 15.07 6.16 6.16 Total: -1.00 -34.62 408.99 -10.45 -45.07 By element: Atomic # 1 Polarization: 9.59 SS G_CDS: -6.50 Total: 3.08 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: -2.73 Total: -0.89 kcal Atomic # 7 Polarization: -51.63 SS G_CDS: -1.35 Total: -52.99 kcal Atomic # 8 Polarization: -16.04 SS G_CDS: -1.00 Total: -17.05 kcal Atomic # 14 Polarization: 21.63 SS G_CDS: -5.02 Total: 16.61 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -34.62 -10.45 -45.07 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000020715981.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.299 kcal (2) G-P(sol) polarization free energy of solvation -34.623 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.324 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.450 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.073 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.774 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds