Wall clock time and date at job start Tue Mar 31 2020 05:18:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46906 * 1 3 3 C 1.46898 * 111.00460 * 2 1 4 4 C 1.50698 * 109.46752 * 293.95420 * 3 2 1 5 5 C 1.38237 * 120.01018 * 104.99771 * 4 3 2 6 6 C 1.38225 * 120.01388 * 179.74197 * 5 4 3 7 7 C 1.38263 * 120.02683 * 0.25440 * 6 5 4 8 8 C 1.38193 * 120.01226 * 0.02562 * 7 6 5 9 9 C 1.38341 * 120.00733 * 285.27174 * 4 3 2 10 10 Cl 1.73596 * 120.00927 * 0.02562 * 9 4 3 11 11 C 1.46905 * 110.99526 * 123.95371 * 2 1 3 12 12 C 1.53000 * 109.47255 * 66.04416 * 11 2 1 13 13 H 1.08997 * 109.47291 * 304.99794 * 12 11 2 14 14 O 1.42897 * 109.47036 * 64.99924 * 12 11 2 15 15 C 1.52999 * 109.47018 * 184.99933 * 12 11 2 16 16 O 1.42896 * 109.47060 * 175.00039 * 15 12 11 17 17 C 1.35676 * 116.99821 * 179.97438 * 16 15 12 18 18 C 1.39304 * 119.82129 * 359.72364 * 17 16 15 19 19 C 1.36442 * 120.18767 * 179.75758 * 18 17 16 20 20 C 1.40833 * 119.81025 * 0.52099 * 19 18 17 21 21 C 1.41209 * 120.17926 * 179.72140 * 20 19 18 22 22 H 1.08006 * 120.00294 * 24.56351 * 21 20 19 23 23 C 1.39896 * 119.99970 * 204.56788 * 21 20 19 24 24 N 1.30880 * 119.99697 * 17.93075 * 23 21 20 25 25 Si 1.86794 * 119.99948 * 197.92889 * 23 21 20 26 26 H 1.48495 * 109.47361 * 60.00093 * 25 23 21 27 27 H 1.48504 * 109.47039 * 179.97438 * 25 23 21 28 28 H 1.48498 * 109.47582 * 299.99594 * 25 23 21 29 29 C 1.40836 * 119.64141 * 359.73164 * 20 19 18 30 30 C 1.36443 * 119.80956 * 0.02562 * 29 20 19 31 31 H 1.09001 * 109.46612 * 60.00014 * 1 2 3 32 32 H 1.08991 * 109.47430 * 180.02562 * 1 2 3 33 33 H 1.08996 * 109.46955 * 300.00557 * 1 2 3 34 34 H 1.08994 * 109.47497 * 173.95356 * 3 2 1 35 35 H 1.09002 * 109.47082 * 53.95120 * 3 2 1 36 36 H 1.07999 * 119.98904 * 0.02562 * 5 4 3 37 37 H 1.08002 * 119.98212 * 180.23896 * 6 5 4 38 38 H 1.07993 * 119.99061 * 179.97438 * 7 6 5 39 39 H 1.07994 * 120.00630 * 179.97438 * 8 7 6 40 40 H 1.09002 * 109.46563 * 186.04382 * 11 2 1 41 41 H 1.09002 * 109.46786 * 306.04255 * 11 2 1 42 42 H 0.96703 * 114.00434 * 59.99766 * 14 12 11 43 43 H 1.08998 * 109.47150 * 295.00061 * 15 12 11 44 44 H 1.09000 * 109.47144 * 54.99991 * 15 12 11 45 45 H 1.08007 * 119.90968 * 0.02614 * 18 17 16 46 46 H 1.08002 * 120.09573 * 180.25608 * 19 18 17 47 47 H 0.97009 * 119.99996 * 180.02562 * 24 23 21 48 48 H 1.07993 * 120.09231 * 179.97438 * 29 20 19 49 49 H 1.08001 * 119.90340 * 179.97438 * 30 29 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.6371 2.0470 -1.2985 5 6 0.6300 2.9934 -1.3304 6 6 0.3047 3.6170 -2.5203 7 6 0.9827 3.2909 -3.6803 8 6 1.9858 2.3408 -3.6507 9 6 2.3120 1.7162 -2.4599 10 17 3.5715 0.5222 -2.4221 11 6 1.9954 -0.7660 1.1377 12 6 1.6313 -2.2426 0.9704 13 1 0.5531 -2.3389 0.8434 14 8 2.2955 -2.7697 -0.1798 15 6 2.0697 -3.0199 2.2133 16 8 1.6270 -4.3745 2.1087 17 6 1.9365 -5.2047 3.1362 18 6 2.6602 -4.7210 4.2237 19 6 2.9712 -5.5481 5.2634 20 6 2.5679 -6.8970 5.2297 21 6 2.8907 -7.7613 6.2987 22 1 3.0763 -7.3571 7.2829 23 6 2.9702 -9.1413 6.0830 24 7 3.0970 -9.6071 4.8665 25 14 2.8953 -10.3188 7.5311 26 1 1.6067 -10.1413 8.2474 27 1 2.9991 -11.7160 7.0388 28 1 4.0201 -10.0354 8.4583 29 6 1.8411 -7.3794 4.1240 30 6 1.5339 -6.5378 3.0949 31 1 -0.3632 0.5139 -0.8900 32 1 -0.3634 -1.0276 0.0005 33 1 -0.3633 0.5139 0.8899 34 1 3.0798 1.3443 0.1082 35 1 1.5613 1.9273 0.8309 36 1 0.1003 3.2488 -0.4245 37 1 -0.4797 4.3591 -2.5439 38 1 0.7278 3.7782 -4.6097 39 1 2.5151 2.0859 -4.5569 40 1 3.0797 -0.6612 1.1757 41 1 1.5610 -0.3872 2.0628 42 1 3.2600 -2.7168 -0.1358 43 1 3.1567 -2.9979 2.2909 44 1 1.6328 -2.5623 3.1008 45 1 2.9722 -3.6873 4.2461 46 1 3.5288 -5.1705 6.1077 47 1 3.1517 -10.5641 4.7168 48 1 1.5286 -8.4125 4.0904 49 1 0.9770 -6.9062 2.2460 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000014200891.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:18:23 Heat of formation + Delta-G solvation = -42.501072 kcal Electronic energy + Delta-G solvation = -30270.376099 eV Core-core repulsion = 25995.361321 eV Total energy + Delta-G solvation = -4275.014778 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 375.139 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -40.03062 -39.09865 -38.08148 -36.56225 -36.54933 -35.70751 -33.30315 -32.34597 -31.08597 -30.46978 -29.53898 -28.95988 -27.61086 -26.46477 -24.70325 -23.42959 -23.05795 -21.68334 -21.12328 -20.62185 -20.54196 -17.43504 -17.35228 -17.11478 -16.51861 -16.35621 -16.14439 -15.82115 -15.52662 -15.20554 -14.91612 -14.53263 -14.20988 -14.08922 -13.94483 -13.84869 -13.60433 -13.24522 -13.15584 -12.81857 -12.37646 -12.24074 -12.13454 -12.07052 -11.85439 -11.77537 -11.71355 -11.67522 -11.59487 -11.33128 -11.11164 -10.95318 -10.88486 -10.75140 -10.55023 -9.97451 -9.88782 -9.80990 -9.34025 -9.31659 -9.00813 -8.99128 -8.52982 -7.63291 -7.02020 -6.71260 -4.24604 0.78450 0.84757 1.99443 2.79957 2.96044 3.08496 3.10802 3.13184 3.23122 3.55732 3.95690 4.10832 4.26930 4.37197 4.52202 4.58838 4.63151 4.76338 4.83160 4.93184 4.95595 5.09135 5.10295 5.16805 5.27472 5.29178 5.36846 5.38722 5.46836 5.51701 5.62918 5.68270 5.76880 5.83863 5.95633 6.00420 6.06910 6.07422 6.24079 6.38480 6.70041 6.74160 6.76194 6.98699 7.12173 7.19514 7.47611 7.56670 7.79965 7.82607 8.01246 8.21546 8.46611 8.66383 8.90718 8.99848 10.23143 Molecular weight = 375.14amu Principal moments of inertia in cm(-1) A = 0.028851 B = 0.001416 C = 0.001393 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 970.259657 B =19773.770082 C =20089.479749 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 N -0.518 5.518 3 C 0.092 3.908 4 C -0.072 4.072 5 C -0.103 4.103 6 C -0.120 4.120 7 C -0.109 4.109 8 C -0.116 4.116 9 C -0.010 4.010 10 Cl -0.052 7.052 11 C 0.028 3.972 12 C 0.117 3.883 13 H 0.105 0.895 14 O -0.536 6.536 15 C 0.038 3.962 16 O -0.317 6.317 17 C -0.009 4.009 18 C -0.168 4.168 19 C -0.199 4.199 20 C 0.088 3.912 21 C -0.465 4.465 22 H 0.076 0.924 23 C 0.075 3.925 24 N -0.798 5.798 25 Si 0.908 3.092 26 H -0.264 1.264 27 H -0.279 1.279 28 H -0.266 1.266 29 C -0.133 4.133 30 C -0.119 4.119 31 H 0.068 0.932 32 H 0.075 0.925 33 H 0.025 0.975 34 H 0.088 0.912 35 H 0.045 0.955 36 H 0.127 0.873 37 H 0.127 0.873 38 H 0.129 0.871 39 H 0.132 0.868 40 H 0.081 0.919 41 H 0.046 0.954 42 H 0.369 0.631 43 H 0.052 0.948 44 H 0.055 0.945 45 H 0.092 0.908 46 H 0.094 0.906 47 H 0.281 0.719 48 H 0.126 0.874 49 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.334 25.376 -13.816 29.085 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.129 4.129 2 N -0.241 5.241 3 C -0.036 4.036 4 C -0.073 4.073 5 C -0.122 4.122 6 C -0.138 4.138 7 C -0.127 4.127 8 C -0.135 4.135 9 C -0.037 4.037 10 Cl -0.023 7.023 11 C -0.101 4.101 12 C 0.057 3.943 13 H 0.122 0.878 14 O -0.340 6.340 15 C -0.039 4.039 16 O -0.232 6.232 17 C -0.052 4.052 18 C -0.187 4.187 19 C -0.219 4.219 20 C 0.086 3.914 21 C -0.495 4.495 22 H 0.094 0.906 23 C -0.142 4.142 24 N -0.424 5.424 25 Si 0.732 3.268 26 H -0.189 1.189 27 H -0.204 1.204 28 H -0.191 1.191 29 C -0.153 4.153 30 C -0.138 4.138 31 H 0.087 0.913 32 H 0.094 0.906 33 H 0.043 0.957 34 H 0.106 0.894 35 H 0.063 0.937 36 H 0.145 0.855 37 H 0.145 0.855 38 H 0.147 0.853 39 H 0.150 0.850 40 H 0.100 0.900 41 H 0.064 0.936 42 H 0.215 0.785 43 H 0.071 0.929 44 H 0.073 0.927 45 H 0.110 0.890 46 H 0.112 0.888 47 H 0.091 0.909 48 H 0.143 0.857 49 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -3.735 24.635 -14.717 28.938 hybrid contribution 0.577 0.033 1.788 1.879 sum -3.158 24.668 -12.929 28.029 Atomic orbital electron populations 1.22498 0.87146 1.02740 1.00487 1.61834 1.08022 1.11521 1.42728 1.21061 1.01088 0.88572 0.92856 1.19634 0.96173 0.97063 0.94425 1.21054 0.96458 0.96141 0.98572 1.21199 1.00003 1.00013 0.92598 1.21121 0.95610 0.97300 0.98692 1.21105 0.98517 0.96945 0.96889 1.20812 0.94229 0.94124 0.94558 1.98395 1.49923 1.55290 1.98683 1.22744 1.00960 0.94472 0.91878 1.21854 0.98715 0.88933 0.84796 0.87768 1.86648 1.22935 1.84130 1.40297 1.23120 0.98984 0.83893 0.97937 1.85889 1.75817 1.18610 1.42895 1.18623 1.06668 0.90583 0.89303 1.20389 1.03977 0.98287 0.96066 1.20547 1.06937 0.95382 0.98987 1.17591 0.89738 0.91227 0.92895 1.19424 1.42618 0.90884 0.96539 0.90622 1.25875 0.92303 0.99343 0.96650 1.69830 1.35194 1.15557 1.21855 0.86384 0.79909 0.78696 0.81799 1.18903 1.20379 1.19116 1.20981 1.00367 0.99333 0.94580 1.19848 1.03635 0.90625 0.99677 0.91296 0.90638 0.95669 0.89352 0.93689 0.85488 0.85541 0.85283 0.85012 0.90029 0.93617 0.78484 0.92945 0.92703 0.88998 0.88814 0.90851 0.85677 0.88435 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.18 9.15 60.07 0.55 0.73 16 2 N -0.52 -4.95 4.58 -244.37 -1.12 -6.07 16 3 C 0.09 0.75 4.43 -4.98 -0.02 0.73 16 4 C -0.07 -0.60 4.42 -104.59 -0.46 -1.06 16 5 C -0.10 -0.71 9.13 -39.59 -0.36 -1.07 16 6 C -0.12 -0.73 10.05 -39.58 -0.40 -1.13 16 7 C -0.11 -0.68 10.05 -39.59 -0.40 -1.08 16 8 C -0.12 -0.89 9.83 -39.55 -0.39 -1.28 16 9 C -0.01 -0.09 6.31 -39.49 -0.25 -0.34 16 10 Cl -0.05 -0.52 27.55 -51.86 -1.43 -1.94 16 11 C 0.03 0.27 4.60 -3.82 -0.02 0.25 16 12 C 0.12 1.49 3.21 -26.73 -0.09 1.40 16 13 H 0.10 1.41 6.26 -51.93 -0.33 1.08 16 14 O -0.54 -7.66 13.25 -40.09 -0.53 -8.19 16 15 C 0.04 0.58 4.36 37.16 0.16 0.75 16 16 O -0.32 -6.56 10.09 -23.59 -0.24 -6.80 16 17 C -0.01 -0.20 6.71 -38.78 -0.26 -0.46 16 18 C -0.17 -3.82 8.96 -39.83 -0.36 -4.18 16 19 C -0.20 -4.91 9.74 -39.25 -0.38 -5.29 16 20 C 0.09 2.36 5.57 -106.81 -0.60 1.77 16 21 C -0.46 -12.41 9.04 -37.83 -0.34 -12.75 16 22 H 0.08 1.93 7.91 -52.48 -0.41 1.52 16 23 C 0.08 1.90 5.13 -17.34 -0.09 1.81 16 24 N -0.80 -20.84 10.96 55.55 0.61 -20.23 16 25 Si 0.91 18.78 29.60 -169.99 -5.03 13.75 16 26 H -0.26 -5.42 7.11 56.52 0.40 -5.02 16 27 H -0.28 -5.62 7.11 56.52 0.40 -5.22 16 28 H -0.27 -5.44 7.11 56.52 0.40 -5.04 16 29 C -0.13 -3.52 8.64 -39.25 -0.34 -3.86 16 30 C -0.12 -2.94 9.92 -39.83 -0.40 -3.33 16 31 H 0.07 0.63 6.88 -51.93 -0.36 0.27 16 32 H 0.07 0.76 6.20 -51.93 -0.32 0.44 16 33 H 0.02 0.20 8.14 -51.93 -0.42 -0.22 16 34 H 0.09 0.73 7.39 -51.93 -0.38 0.35 16 35 H 0.04 0.32 7.93 -51.93 -0.41 -0.09 16 36 H 0.13 0.67 8.00 -52.49 -0.42 0.25 16 37 H 0.13 0.50 8.06 -52.49 -0.42 0.07 16 38 H 0.13 0.52 8.06 -52.49 -0.42 0.10 16 39 H 0.13 0.84 8.06 -52.49 -0.42 0.42 16 40 H 0.08 0.72 7.93 -51.93 -0.41 0.31 16 41 H 0.05 0.41 8.12 -51.93 -0.42 -0.01 16 42 H 0.37 4.23 9.05 45.56 0.41 4.64 16 43 H 0.05 0.77 7.63 -51.93 -0.40 0.38 16 44 H 0.05 0.80 7.66 -51.93 -0.40 0.40 16 45 H 0.09 1.79 6.27 -52.48 -0.33 1.46 16 46 H 0.09 2.16 8.06 -52.49 -0.42 1.74 16 47 H 0.28 6.69 8.30 -40.82 -0.34 6.35 16 48 H 0.13 3.38 6.16 -52.49 -0.32 3.05 16 49 H 0.10 2.25 8.06 -52.49 -0.42 1.82 16 LS Contribution 416.72 15.07 6.28 6.28 Total: -1.00 -30.49 416.72 -12.07 -42.56 By element: Atomic # 1 Polarization: 15.22 SS G_CDS: -6.17 Total: 9.05 kcal Atomic # 6 Polarization: -23.96 SS G_CDS: -4.43 Total: -28.39 kcal Atomic # 7 Polarization: -25.80 SS G_CDS: -0.51 Total: -26.31 kcal Atomic # 8 Polarization: -14.22 SS G_CDS: -0.77 Total: -14.99 kcal Atomic # 14 Polarization: 18.78 SS G_CDS: -5.03 Total: 13.75 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -1.43 Total: -1.94 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -30.49 -12.07 -42.56 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000014200891.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.055 kcal (2) G-P(sol) polarization free energy of solvation -30.491 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.435 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.556 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.501 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds