Wall clock time and date at job start Tue Mar 31 2020 05:18:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 C 1.46902 * 111.00079 * 2 1 4 4 C 1.50700 * 109.47016 * 293.95536 * 3 2 1 5 5 C 1.38233 * 120.00875 * 105.00175 * 4 3 2 6 6 C 1.38225 * 120.01539 * 179.70369 * 5 4 3 7 7 C 1.38258 * 120.02301 * 0.04195 * 6 5 4 8 8 C 1.38190 * 120.01673 * 359.97438 * 7 6 5 9 9 C 1.38341 * 120.00683 * 284.72606 * 4 3 2 10 10 Cl 1.73598 * 120.01122 * 0.24872 * 9 4 3 11 11 C 1.46900 * 111.00267 * 123.95199 * 2 1 3 12 12 C 1.52999 * 109.47148 * 160.72283 * 11 2 1 13 13 H 1.09000 * 109.47151 * 54.21816 * 12 11 2 14 14 O 1.42904 * 109.47378 * 294.21302 * 12 11 2 15 15 C 1.53005 * 109.46922 * 174.21695 * 12 11 2 16 16 O 1.42900 * 109.46848 * 185.00072 * 15 12 11 17 17 C 1.35673 * 116.99882 * 179.97438 * 16 15 12 18 18 C 1.39314 * 119.81938 * 359.72951 * 17 16 15 19 19 C 1.36437 * 120.18557 * 179.76472 * 18 17 16 20 20 C 1.40834 * 119.81321 * 0.50362 * 19 18 17 21 21 C 1.41211 * 120.18107 * 179.72400 * 20 19 18 22 22 H 1.08001 * 120.00046 * 153.31521 * 21 20 19 23 23 C 1.39892 * 119.99734 * 333.31814 * 21 20 19 24 24 N 1.30872 * 120.00321 * 343.05963 * 23 21 20 25 25 Si 1.86800 * 119.99580 * 163.05298 * 23 21 20 26 26 H 1.48501 * 109.46930 * 94.98322 * 25 23 21 27 27 H 1.48500 * 109.47325 * 214.97767 * 25 23 21 28 28 H 1.48496 * 109.47437 * 334.98071 * 25 23 21 29 29 C 1.40837 * 119.64074 * 359.74519 * 20 19 18 30 30 C 1.36443 * 119.81022 * 0.02562 * 29 20 19 31 31 H 1.09002 * 109.47412 * 65.58784 * 1 2 3 32 32 H 1.08997 * 109.47077 * 185.58738 * 1 2 3 33 33 H 1.09003 * 109.46776 * 305.58651 * 1 2 3 34 34 H 1.09002 * 109.47204 * 173.96032 * 3 2 1 35 35 H 1.08993 * 109.47270 * 53.95214 * 3 2 1 36 36 H 1.07997 * 119.98986 * 359.72101 * 5 4 3 37 37 H 1.08002 * 119.98617 * 180.02562 * 6 5 4 38 38 H 1.08000 * 119.98880 * 179.97438 * 7 6 5 39 39 H 1.08001 * 120.00616 * 180.02562 * 8 7 6 40 40 H 1.08994 * 109.47085 * 280.72232 * 11 2 1 41 41 H 1.09002 * 109.46947 * 40.72229 * 11 2 1 42 42 H 0.96699 * 113.99923 * 300.00558 * 14 12 11 43 43 H 1.09002 * 109.46944 * 304.99649 * 15 12 11 44 44 H 1.08994 * 109.47368 * 65.00046 * 15 12 11 45 45 H 1.08005 * 119.90272 * 0.02562 * 18 17 16 46 46 H 1.08000 * 120.09275 * 180.25232 * 19 18 17 47 47 H 0.97005 * 120.00131 * 179.97438 * 24 23 21 48 48 H 1.07989 * 120.09259 * 179.97438 * 29 20 19 49 49 H 1.07999 * 119.90759 * 179.97438 * 30 29 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.6369 2.0471 -1.2984 5 6 0.6298 2.9935 -1.3303 6 6 0.3049 3.6178 -2.5200 7 6 0.9864 3.2955 -3.6789 8 6 1.9932 2.3493 -3.6485 9 6 2.3194 1.7246 -2.4577 10 17 3.5847 0.5367 -2.4184 11 6 1.9955 -0.7659 1.1376 12 6 3.4494 -1.1543 0.8618 13 1 4.0251 -0.2603 0.6221 14 8 3.4990 -2.0626 -0.2404 15 6 4.0422 -1.8252 2.1025 16 8 5.4312 -2.0827 1.8870 17 6 6.1114 -2.6784 2.8985 18 6 5.4502 -3.0035 4.0808 19 6 6.1258 -3.6071 5.1010 20 6 7.4979 -3.8918 4.9603 21 6 8.2061 -4.5110 6.0135 22 1 9.0804 -5.1075 5.7989 23 6 7.7750 -4.3518 7.3348 24 7 6.9429 -3.3889 7.6401 25 14 8.3869 -5.5138 8.6632 26 1 9.5594 -4.9108 9.3466 27 1 7.3045 -5.7489 9.6523 28 1 8.7834 -6.8054 8.0469 29 6 8.1600 -3.5552 3.7637 30 6 7.4686 -2.9562 2.7514 31 1 -0.3634 0.4247 -0.9358 32 1 -0.3633 -1.0228 0.1001 33 1 -0.3633 0.5981 0.8358 34 1 3.0797 1.3444 0.1081 35 1 1.5611 1.9273 0.8308 36 1 0.0969 3.2453 -0.4253 37 1 -0.4817 4.3574 -2.5442 38 1 0.7319 3.7833 -4.6082 39 1 2.5257 2.0980 -4.5538 40 1 1.9472 -0.1561 2.0397 41 1 1.3986 -1.6674 1.2760 42 1 3.0069 -2.8825 -0.0968 43 1 3.9240 -1.1667 2.9631 44 1 3.5233 -2.7652 2.2902 45 1 4.3988 -2.7809 4.1885 46 1 5.6108 -3.8621 6.0154 47 1 6.6437 -3.2788 8.5563 48 1 9.2120 -3.7698 3.6482 49 1 7.9749 -2.6970 1.8333 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000014200892.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:18:27 Heat of formation + Delta-G solvation = -42.929824 kcal Electronic energy + Delta-G solvation = -30661.885906 eV Core-core repulsion = 26386.852536 eV Total energy + Delta-G solvation = -4275.033370 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 375.139 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -39.96976 -39.05133 -38.03444 -36.54955 -36.36380 -35.67628 -33.31079 -32.19754 -30.98434 -30.56210 -29.62409 -29.02934 -27.39558 -26.44134 -24.67034 -23.18592 -22.94977 -21.99740 -21.09981 -20.74429 -20.32912 -17.38108 -17.34630 -17.07646 -16.50516 -16.34259 -16.11209 -15.62458 -15.32485 -15.22407 -14.94508 -14.63648 -14.09632 -14.00619 -13.90603 -13.80640 -13.46696 -13.23739 -13.14402 -12.74472 -12.40617 -12.34922 -12.10351 -11.98559 -11.90895 -11.71527 -11.58130 -11.53200 -11.49510 -11.41430 -11.11576 -11.01963 -10.77648 -10.66653 -10.55884 -9.95700 -9.81460 -9.76224 -9.34624 -9.25877 -9.02141 -8.87894 -8.51001 -7.65153 -6.98109 -6.71561 -4.24758 0.86901 0.92440 2.17611 2.77524 2.96584 3.08321 3.12887 3.20701 3.21638 3.56899 3.96082 4.13192 4.35623 4.44027 4.54288 4.63452 4.64012 4.79766 4.87201 5.00395 5.02679 5.07687 5.16078 5.18952 5.31211 5.33019 5.38807 5.45129 5.47806 5.60556 5.65593 5.66176 5.69478 5.91541 6.03766 6.06797 6.10475 6.10823 6.29223 6.46233 6.68786 6.74843 6.78096 6.89759 7.07796 7.28262 7.41381 7.56881 7.85885 7.90388 8.01017 8.16096 8.46036 8.66027 8.91183 8.99993 10.24084 Molecular weight = 375.14amu Principal moments of inertia in cm(-1) A = 0.021761 B = 0.001619 C = 0.001562 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1286.383689 B =17291.784688 C =17925.226708 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 N -0.518 5.518 3 C 0.088 3.912 4 C -0.072 4.072 5 C -0.104 4.104 6 C -0.122 4.122 7 C -0.110 4.110 8 C -0.117 4.117 9 C -0.015 4.015 10 Cl -0.036 7.036 11 C 0.026 3.974 12 C 0.121 3.879 13 H 0.102 0.898 14 O -0.534 6.534 15 C 0.037 3.963 16 O -0.317 6.317 17 C -0.006 4.006 18 C -0.176 4.176 19 C -0.131 4.131 20 C 0.087 3.913 21 C -0.465 4.465 22 H 0.077 0.923 23 C 0.075 3.925 24 N -0.803 5.803 25 Si 0.906 3.094 26 H -0.271 1.271 27 H -0.277 1.277 28 H -0.261 1.261 29 C -0.193 4.193 30 C -0.114 4.114 31 H 0.068 0.932 32 H 0.068 0.932 33 H 0.024 0.976 34 H 0.092 0.908 35 H 0.046 0.954 36 H 0.126 0.874 37 H 0.125 0.875 38 H 0.128 0.872 39 H 0.131 0.869 40 H 0.047 0.953 41 H 0.082 0.918 42 H 0.367 0.633 43 H 0.055 0.945 44 H 0.052 0.948 45 H 0.093 0.907 46 H 0.118 0.882 47 H 0.278 0.722 48 H 0.100 0.900 49 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.957 12.269 -16.481 26.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.242 5.242 3 C -0.039 4.039 4 C -0.073 4.073 5 C -0.123 4.123 6 C -0.140 4.140 7 C -0.128 4.128 8 C -0.136 4.136 9 C -0.043 4.043 10 Cl -0.007 7.007 11 C -0.102 4.102 12 C 0.060 3.940 13 H 0.120 0.880 14 O -0.337 6.337 15 C -0.040 4.040 16 O -0.232 6.232 17 C -0.049 4.049 18 C -0.195 4.195 19 C -0.151 4.151 20 C 0.085 3.915 21 C -0.495 4.495 22 H 0.095 0.905 23 C -0.141 4.141 24 N -0.430 5.430 25 Si 0.730 3.270 26 H -0.197 1.197 27 H -0.202 1.202 28 H -0.185 1.185 29 C -0.213 4.213 30 C -0.132 4.132 31 H 0.087 0.913 32 H 0.087 0.913 33 H 0.043 0.957 34 H 0.110 0.890 35 H 0.064 0.936 36 H 0.144 0.856 37 H 0.143 0.857 38 H 0.146 0.854 39 H 0.149 0.851 40 H 0.066 0.934 41 H 0.101 0.899 42 H 0.213 0.787 43 H 0.073 0.927 44 H 0.070 0.930 45 H 0.111 0.889 46 H 0.136 0.864 47 H 0.089 0.911 48 H 0.118 0.882 49 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -16.352 12.556 -17.124 26.801 hybrid contribution -0.560 -0.479 2.050 2.178 sum -16.912 12.077 -15.074 25.673 Atomic orbital electron populations 1.22421 0.87162 1.01807 1.00846 1.61810 1.07451 1.12083 1.42820 1.21147 1.01596 0.88281 0.92886 1.19622 0.96138 0.97113 0.94427 1.21036 0.96630 0.96169 0.98470 1.21168 1.00129 1.00102 0.92630 1.21110 0.95685 0.97370 0.98640 1.21117 0.98488 0.97037 0.96948 1.20952 0.94315 0.94513 0.94487 1.98452 1.48897 1.54726 1.98613 1.22770 0.96868 0.98735 0.91815 1.21795 0.93093 0.93405 0.85677 0.88014 1.86667 1.76047 1.31216 1.39775 1.23149 0.83484 0.99538 0.97825 1.85874 1.20123 1.77299 1.39950 1.18609 0.92201 1.05788 0.88339 1.20589 0.98211 1.05946 0.94718 1.20887 0.94394 1.02087 0.97714 1.17595 0.91535 0.90552 0.91844 1.19448 1.11531 1.28033 0.90500 0.90524 1.25855 0.93900 0.94362 1.00005 1.69836 1.27027 1.25446 1.20687 0.86342 0.79074 0.81496 0.80042 1.19673 1.20177 1.18497 1.20627 0.98101 1.06728 0.95829 1.19632 0.91184 1.03440 0.98990 0.91318 0.91332 0.95748 0.89016 0.93623 0.85617 0.85658 0.85396 0.85069 0.93437 0.89935 0.78736 0.92667 0.92950 0.88942 0.86401 0.91093 0.88187 0.88471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.21 9.27 60.06 0.56 0.76 16 2 N -0.52 -5.01 4.55 -244.38 -1.11 -6.12 16 3 C 0.09 0.84 4.26 -4.97 -0.02 0.82 16 4 C -0.07 -0.67 4.44 -104.59 -0.46 -1.14 16 5 C -0.10 -0.79 9.30 -39.59 -0.37 -1.16 16 6 C -0.12 -0.82 10.05 -39.58 -0.40 -1.22 16 7 C -0.11 -0.77 10.04 -39.59 -0.40 -1.16 16 8 C -0.12 -1.01 9.83 -39.55 -0.39 -1.40 16 9 C -0.02 -0.16 6.31 -39.50 -0.25 -0.41 16 10 Cl -0.04 -0.44 27.56 -51.86 -1.43 -1.87 16 11 C 0.03 0.26 4.63 -3.82 -0.02 0.24 16 12 C 0.12 1.54 3.34 -26.73 -0.09 1.45 16 13 H 0.10 1.44 6.62 -51.93 -0.34 1.10 16 14 O -0.53 -7.26 13.26 -40.09 -0.53 -7.80 16 15 C 0.04 0.58 4.37 37.16 0.16 0.74 16 16 O -0.32 -6.54 10.09 -23.58 -0.24 -6.78 16 17 C -0.01 -0.14 6.71 -38.78 -0.26 -0.40 16 18 C -0.18 -4.13 8.96 -39.83 -0.36 -4.48 16 19 C -0.13 -3.42 8.62 -39.25 -0.34 -3.76 16 20 C 0.09 2.34 5.55 -106.80 -0.59 1.75 16 21 C -0.46 -12.43 9.03 -37.83 -0.34 -12.77 16 22 H 0.08 1.97 7.90 -52.49 -0.41 1.55 16 23 C 0.07 1.90 5.14 -17.34 -0.09 1.81 16 24 N -0.80 -20.92 11.05 55.54 0.61 -20.31 16 25 Si 0.91 18.79 29.59 -169.99 -5.03 13.76 16 26 H -0.27 -5.56 7.11 56.52 0.40 -5.16 16 27 H -0.28 -5.60 7.11 56.52 0.40 -5.20 16 28 H -0.26 -5.37 7.11 56.52 0.40 -4.97 16 29 C -0.19 -4.83 9.74 -39.25 -0.38 -5.21 16 30 C -0.11 -2.70 9.92 -39.83 -0.40 -3.10 16 31 H 0.07 0.57 7.22 -51.93 -0.37 0.19 16 32 H 0.07 0.51 7.84 -51.93 -0.41 0.10 16 33 H 0.02 0.17 8.07 -51.93 -0.42 -0.24 16 34 H 0.09 1.00 5.97 -51.93 -0.31 0.69 16 35 H 0.05 0.38 7.88 -51.93 -0.41 -0.02 16 36 H 0.13 0.75 8.00 -52.49 -0.42 0.33 16 37 H 0.13 0.56 8.06 -52.49 -0.42 0.14 16 38 H 0.13 0.59 8.06 -52.49 -0.42 0.17 16 39 H 0.13 0.96 8.06 -52.49 -0.42 0.54 16 40 H 0.05 0.45 8.00 -51.93 -0.42 0.03 16 41 H 0.08 0.72 7.75 -51.93 -0.40 0.31 16 42 H 0.37 3.89 9.05 45.56 0.41 4.30 16 43 H 0.06 0.85 7.63 -51.93 -0.40 0.45 16 44 H 0.05 0.77 7.66 -51.93 -0.40 0.38 16 45 H 0.09 1.91 6.27 -52.48 -0.33 1.58 16 46 H 0.12 3.14 6.29 -52.49 -0.33 2.81 16 47 H 0.28 6.59 8.30 -40.82 -0.34 6.26 16 48 H 0.10 2.33 8.06 -52.49 -0.42 1.90 16 49 H 0.10 2.11 8.06 -52.49 -0.42 1.69 16 LS Contribution 417.67 15.07 6.29 6.29 Total: -1.00 -30.46 417.67 -12.07 -42.53 By element: Atomic # 1 Polarization: 15.12 SS G_CDS: -6.21 Total: 8.92 kcal Atomic # 6 Polarization: -24.20 SS G_CDS: -4.43 Total: -28.63 kcal Atomic # 7 Polarization: -25.93 SS G_CDS: -0.50 Total: -26.43 kcal Atomic # 8 Polarization: -13.81 SS G_CDS: -0.77 Total: -14.58 kcal Atomic # 14 Polarization: 18.79 SS G_CDS: -5.03 Total: 13.76 kcal Atomic # 17 Polarization: -0.44 SS G_CDS: -1.43 Total: -1.87 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -30.46 -12.07 -42.53 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000014200892.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.396 kcal (2) G-P(sol) polarization free energy of solvation -30.462 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.859 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.071 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.534 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.930 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds