Wall clock time and date at job start Tue Mar 31 2020 07:08:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.52995 * 109.47611 * 2 1 4 4 N 1.46496 * 109.47361 * 180.02562 * 3 2 1 5 5 C 1.36877 * 120.00045 * 263.93012 * 4 3 2 6 6 H 1.08002 * 120.00198 * 193.52017 * 5 4 3 7 7 C 1.39051 * 119.99716 * 13.52704 * 5 4 3 8 8 N 1.31361 * 119.99989 * 13.59846 * 7 5 4 9 9 Si 1.86799 * 119.99734 * 193.60248 * 7 5 4 10 10 H 1.48501 * 109.47163 * 359.97438 * 9 7 5 11 11 H 1.48503 * 109.47288 * 119.99775 * 9 7 5 12 12 H 1.48497 * 109.47111 * 239.99904 * 9 7 5 13 13 C 1.34773 * 120.00135 * 83.93147 * 4 3 2 14 14 O 1.21602 * 120.00080 * 4.59111 * 13 4 3 15 15 C 1.47700 * 120.00264 * 184.58721 * 13 4 3 16 16 C 1.39658 * 120.14046 * 46.55611 * 15 13 4 17 17 C 1.38129 * 119.82283 * 179.77223 * 16 15 13 18 18 F 1.35099 * 119.94321 * 180.23505 * 17 16 15 19 19 C 1.38629 * 120.11501 * 0.50805 * 17 16 15 20 20 C 1.38277 * 120.29513 * 359.74388 * 19 17 16 21 21 C 1.38049 * 120.17315 * 0.02562 * 20 19 17 22 22 I 2.09501 * 120.06201 * 179.97438 * 21 20 19 23 23 H 1.09000 * 109.47179 * 59.99831 * 1 2 3 24 24 H 1.08996 * 109.47890 * 180.02562 * 1 2 3 25 25 H 1.09005 * 109.46792 * 300.00135 * 1 2 3 26 26 H 1.08996 * 109.46848 * 239.99669 * 2 1 3 27 27 H 1.09000 * 109.47179 * 120.00169 * 2 1 3 28 28 H 1.08996 * 109.47284 * 59.99936 * 3 2 1 29 29 H 1.09000 * 109.46987 * 300.00286 * 3 2 1 30 30 H 0.97001 * 119.99851 * 180.02562 * 8 7 5 31 31 H 1.08004 * 120.08890 * 359.97438 * 16 15 13 32 32 H 1.08001 * 119.85345 * 179.72685 * 19 17 16 33 33 H 1.08000 * 119.91453 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 7 3.5050 1.4423 -0.0006 5 6 4.1899 1.5675 1.1779 6 1 5.2475 1.7863 1.1672 7 6 3.5240 1.4128 2.3887 8 7 2.3192 0.8901 2.4136 9 14 4.3429 1.9484 3.9799 10 1 5.6886 2.5014 3.6824 11 1 3.5135 2.9902 4.6373 12 1 4.4779 0.7791 4.8852 13 6 4.1784 1.3191 -1.1615 14 8 3.5729 1.2920 -2.2157 15 6 5.6519 1.2171 -1.1534 16 6 6.2899 0.3503 -0.2634 17 6 7.6680 0.2566 -0.2647 18 9 8.2875 -0.5845 0.5919 19 6 8.4168 1.0284 -1.1396 20 6 7.7904 1.8921 -2.0192 21 6 6.4136 1.9918 -2.0315 22 53 5.4681 3.3020 -3.3651 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3635 -1.0276 0.0005 25 1 -0.3633 0.5139 0.8900 26 1 1.8932 -0.5139 -0.8899 27 1 1.8933 -0.5139 0.8900 28 1 1.6768 1.9563 0.8899 29 1 1.6767 1.9563 -0.8900 30 1 1.8545 0.7825 3.2583 31 1 5.7072 -0.2475 0.4218 32 1 9.4943 0.9551 -1.1339 33 1 8.3798 2.4908 -2.6978 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). I: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000069487302.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 07:08:43 Heat of formation + Delta-G solvation = -25.841845 kcal Electronic energy + Delta-G solvation = -20498.773995 eV Core-core repulsion = 17106.023475 eV Total energy + Delta-G solvation = -3392.750520 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 377.003 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -48.66163 -39.60855 -37.66800 -35.29645 -32.51140 -31.84733 -31.45973 -30.65352 -27.34693 -25.94611 -24.88595 -23.02986 -21.83449 -20.51239 -19.41736 -18.11518 -16.48086 -16.25685 -15.72384 -15.32043 -15.18729 -14.43607 -14.37198 -13.86349 -13.66501 -13.43763 -12.93561 -12.93329 -12.34792 -12.11085 -11.72897 -11.43810 -11.24055 -11.06292 -10.92912 -10.77422 -10.58802 -10.42456 -10.33124 -9.78135 -9.66384 -9.38797 -8.96140 -8.66425 -8.42894 -8.25870 -7.82389 -6.47640 -4.03418 1.13389 1.36699 1.59198 3.00333 3.13380 3.16479 3.45656 3.93836 4.04052 4.38551 4.60737 4.87662 5.06005 5.15284 5.51064 5.59572 5.92861 6.05586 6.13098 6.14722 6.28416 6.33348 6.42040 6.53369 6.67453 6.85458 6.96990 7.01709 7.03612 7.18744 7.40543 7.60869 7.74085 8.30818 8.89938 9.33818 9.74768 10.44788 Molecular weight = 377.00amu Principal moments of inertia in cm(-1) A = 0.010623 B = 0.005737 C = 0.004387 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2635.217176 B = 4879.132510 C = 6380.718890 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.117 4.117 3 C 0.139 3.861 4 N -0.417 5.417 5 C -0.333 4.333 6 H 0.101 0.899 7 C 0.038 3.962 8 N -0.851 5.851 9 Si 0.918 3.082 10 H -0.268 1.268 11 H -0.278 1.278 12 H -0.279 1.279 13 C 0.471 3.529 14 O -0.576 6.576 15 C -0.021 4.021 16 C -0.107 4.107 17 C 0.101 3.899 18 F -0.139 7.139 19 C -0.155 4.155 20 C -0.069 4.069 21 C -0.091 4.091 22 I -0.023 7.023 23 H 0.037 0.963 24 H 0.038 0.962 25 H 0.052 0.948 26 H 0.031 0.969 27 H 0.094 0.906 28 H 0.103 0.897 29 H 0.038 0.962 30 H 0.270 0.730 31 H 0.156 0.844 32 H 0.137 0.863 33 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.338 3.188 -6.391 10.240 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.155 4.155 3 C 0.017 3.983 4 N -0.132 5.132 5 C -0.461 4.461 6 H 0.118 0.882 7 C -0.167 4.167 8 N -0.489 5.489 9 Si 0.744 3.256 10 H -0.192 1.192 11 H -0.203 1.203 12 H -0.205 1.205 13 C 0.258 3.742 14 O -0.462 6.462 15 C -0.027 4.027 16 C -0.128 4.128 17 C 0.081 3.919 18 F -0.118 7.118 19 C -0.176 4.176 20 C -0.090 4.090 21 C -0.232 4.232 22 I 0.127 6.873 23 H 0.056 0.944 24 H 0.057 0.943 25 H 0.071 0.929 26 H 0.050 0.950 27 H 0.112 0.888 28 H 0.121 0.879 29 H 0.057 0.943 30 H 0.081 0.919 31 H 0.173 0.827 32 H 0.155 0.845 33 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 6.187 4.026 -7.612 10.603 hybrid contribution 1.109 -0.798 2.021 2.439 sum 7.296 3.227 -5.591 9.742 Atomic orbital electron populations 1.21564 0.97445 0.99777 1.00469 1.21749 0.93900 0.98228 1.01623 1.21390 0.78999 0.97134 1.00817 1.43707 1.06029 1.58559 1.04950 1.19881 0.95406 1.47940 0.82850 0.88183 1.25262 0.96183 0.95820 0.99478 1.70087 1.12689 1.39146 1.26951 0.85980 0.79548 0.78695 0.81338 1.19175 1.20314 1.20477 1.17693 0.85611 0.85864 0.85010 1.90720 1.68137 1.57093 1.30293 1.19930 0.95904 0.94002 0.92882 1.21541 0.92277 0.99954 0.99070 1.17676 0.90862 0.92134 0.91203 1.91491 1.82894 1.69033 1.68354 1.21080 1.00385 0.98668 0.97479 1.20715 0.92397 0.97782 0.98121 1.24397 0.95187 1.02157 1.01497 1.96606 1.81951 1.54258 1.54507 0.94385 0.94322 0.92910 0.94976 0.88815 0.87893 0.94334 0.91903 0.82656 0.84526 0.84717 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 42. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.49 9.91 37.15 0.37 -2.12 16 2 C -0.12 -2.56 5.66 -26.74 -0.15 -2.71 16 3 C 0.14 3.24 4.56 -4.05 -0.02 3.22 16 4 N -0.42 -9.99 2.63 -115.94 -0.31 -10.29 16 5 C -0.33 -7.89 7.90 -15.00 -0.12 -8.01 16 6 H 0.10 2.34 5.71 -52.49 -0.30 2.04 16 7 C 0.04 0.88 5.13 -17.45 -0.09 0.79 16 8 N -0.85 -19.89 8.07 55.50 0.45 -19.45 16 9 Si 0.92 18.56 29.57 -169.99 -5.03 13.54 16 10 H -0.27 -5.42 7.11 56.52 0.40 -5.02 16 11 H -0.28 -5.64 7.11 56.52 0.40 -5.24 16 12 H -0.28 -5.67 7.11 56.52 0.40 -5.27 16 13 C 0.47 11.00 6.58 -12.40 -0.08 10.92 16 14 O -0.58 -14.33 14.66 5.28 0.08 -14.26 16 15 C -0.02 -0.44 4.96 -104.96 -0.52 -0.96 16 16 C -0.11 -2.05 7.63 -39.09 -0.30 -2.35 16 17 C 0.10 1.67 7.29 -39.48 -0.29 1.39 16 18 F -0.14 -2.27 17.26 2.25 0.04 -2.23 16 19 C -0.16 -2.19 10.02 -39.42 -0.39 -2.59 16 20 C -0.07 -1.02 9.74 -39.64 -0.39 -1.40 16 21 C -0.09 -1.64 6.22 -39.11 -0.24 -1.88 16 22 I -0.02 -0.39 37.67 -73.02 -2.75 -3.14 16 23 H 0.04 0.66 8.14 -51.93 -0.42 0.24 16 24 H 0.04 0.64 8.14 -51.93 -0.42 0.22 16 25 H 0.05 0.96 8.14 -51.93 -0.42 0.54 16 26 H 0.03 0.73 8.14 -51.93 -0.42 0.31 16 27 H 0.09 2.22 6.26 -51.93 -0.32 1.89 16 28 H 0.10 2.49 5.83 -51.93 -0.30 2.19 16 29 H 0.04 0.91 7.55 -51.93 -0.39 0.52 16 30 H 0.27 6.03 8.31 -40.82 -0.34 5.69 16 31 H 0.16 3.12 7.11 -52.48 -0.37 2.75 16 32 H 0.14 1.49 8.06 -52.49 -0.42 1.07 16 33 H 0.13 1.59 8.06 -52.49 -0.42 1.16 16 LS Contribution 306.24 15.07 4.61 4.61 Total: -1.00 -25.33 306.24 -8.49 -33.82 By element: Atomic # 1 Polarization: 6.45 SS G_CDS: -3.36 Total: 3.09 kcal Atomic # 6 Polarization: -3.47 SS G_CDS: -2.22 Total: -5.70 kcal Atomic # 7 Polarization: -29.88 SS G_CDS: 0.14 Total: -29.74 kcal Atomic # 8 Polarization: -14.33 SS G_CDS: 0.08 Total: -14.26 kcal Atomic # 9 Polarization: -2.27 SS G_CDS: 0.04 Total: -2.23 kcal Atomic # 14 Polarization: 18.56 SS G_CDS: -5.03 Total: 13.54 kcal Atomic # 53 Polarization: -0.39 SS G_CDS: -2.75 Total: -3.14 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -25.33 -8.49 -33.82 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000069487302.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.977 kcal (2) G-P(sol) polarization free energy of solvation -25.329 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.353 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.819 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.842 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds