Wall clock time and date at job start Tue Mar 31 2020 05:22:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53000 * 109.46853 * 2 1 4 4 C 1.53000 * 109.47212 * 119.99634 * 2 1 3 5 5 H 1.08996 * 109.47122 * 185.55370 * 4 2 1 6 6 C 1.50705 * 109.46991 * 65.55859 * 4 2 1 7 7 H 1.07999 * 119.99603 * 245.44702 * 6 4 2 8 8 C 1.37878 * 120.00313 * 65.44201 * 6 4 2 9 9 N 1.31518 * 119.99585 * 5.23326 * 8 6 4 10 10 Si 1.86794 * 120.00163 * 185.23589 * 8 6 4 11 11 H 1.48492 * 109.47142 * 0.02562 * 10 8 6 12 12 H 1.48504 * 109.47024 * 119.99871 * 10 8 6 13 13 H 1.48499 * 109.46968 * 239.99675 * 10 8 6 14 14 O 1.45197 * 109.47647 * 305.55873 * 4 2 1 15 15 C 1.34234 * 116.99656 * 270.00400 * 14 4 2 16 16 O 1.20821 * 119.99943 * 359.97438 * 15 14 4 17 17 C 1.50707 * 119.99723 * 179.97438 * 15 14 4 18 18 H 1.08998 * 110.85379 * 303.78356 * 17 15 14 19 19 C 1.54630 * 110.97235 * 67.61395 * 17 15 14 20 20 C 1.51280 * 104.19367 * 142.91709 * 19 17 15 21 21 O 1.21286 * 124.93922 * 163.75237 * 20 19 17 22 22 N 1.34422 * 110.11673 * 343.74535 * 20 19 17 23 23 C 1.40096 * 124.34858 * 179.61052 * 22 20 19 24 24 C 1.38840 * 119.99977 * 173.95605 * 23 22 20 25 25 C 1.38180 * 120.06828 * 179.72448 * 24 23 22 26 26 C 1.38553 * 120.11375 * 0.54713 * 25 24 23 27 27 C 1.39282 * 119.94573 * 359.72990 * 26 25 24 28 28 C 1.38487 * 119.89808 * 359.97438 * 27 26 25 29 29 O 1.36518 * 108.64187 * 179.97438 * 27 26 25 30 30 C 1.43986 * 105.49403 * 342.70390 * 29 27 26 31 31 O 1.36600 * 131.43860 * 179.72558 * 26 25 24 32 32 C 1.46762 * 111.29781 * 359.59669 * 22 20 19 33 33 H 1.08997 * 109.47531 * 60.00372 * 1 2 3 34 34 H 1.09000 * 109.47010 * 299.99547 * 1 2 3 35 35 H 1.09000 * 109.46741 * 179.97438 * 1 2 3 36 36 H 1.08997 * 109.47279 * 240.00025 * 2 1 3 37 37 H 1.09005 * 109.47297 * 54.79998 * 3 2 1 38 38 H 1.08997 * 109.47234 * 174.79991 * 3 2 1 39 39 H 1.08999 * 109.47328 * 294.80012 * 3 2 1 40 40 H 0.96995 * 119.99889 * 179.97438 * 9 8 6 41 41 H 1.08998 * 110.48476 * 261.59925 * 19 17 15 42 42 H 1.09004 * 110.48028 * 24.23606 * 19 17 15 43 43 H 1.08002 * 119.96778 * 359.97438 * 24 23 22 44 44 H 1.07999 * 119.93807 * 180.29802 * 25 24 23 45 45 H 1.07993 * 120.01505 * 180.02562 * 28 27 26 46 46 H 1.09001 * 110.57136 * 268.58613 * 30 29 27 47 47 H 1.08999 * 110.56754 * 145.72095 * 30 29 27 48 48 H 1.08998 * 110.24371 * 258.00905 * 32 22 20 49 49 H 1.09004 * 110.24509 * 136.01709 * 32 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7212 1.2493 5 1 3.1254 -0.6358 1.3004 6 6 1.6532 -2.1762 1.1825 7 1 0.9571 -2.5833 1.9008 8 6 2.1879 -2.9875 0.2043 9 7 3.1121 -2.5192 -0.6058 10 14 1.5996 -4.7518 0.0295 11 1 0.5618 -5.0313 1.0541 12 1 1.0233 -4.9495 -1.3248 13 1 2.7456 -5.6768 0.2197 14 8 1.4509 -0.1176 2.4311 15 6 2.1210 0.9003 2.9939 16 8 3.1653 1.2742 2.5151 17 6 1.5705 1.5768 4.2230 18 1 0.5623 1.9495 4.0421 19 6 1.5987 0.6226 5.4394 20 6 1.9507 1.5191 6.6060 21 8 1.8038 1.2285 7.7744 22 7 2.4501 2.6844 6.1594 23 6 2.8657 3.7354 6.9872 24 6 3.4840 4.8500 6.4366 25 6 3.8894 5.8899 7.2512 26 6 3.6903 5.8186 8.6205 27 6 3.0755 4.6993 9.1763 28 6 2.6640 3.6602 8.3585 29 8 2.9979 4.8704 10.5285 30 6 3.9361 5.9178 10.8382 31 8 3.9974 6.6915 9.6253 32 6 2.5042 2.7141 4.6930 33 1 -0.3634 0.5137 -0.8900 34 1 -0.3633 0.5138 0.8900 35 1 -0.3633 -1.0277 -0.0005 36 1 1.8934 -0.5138 -0.8899 37 1 1.6025 1.9826 0.8398 38 1 3.1259 1.4440 0.0931 39 1 1.7546 1.9288 -0.9329 40 1 3.4885 -3.0900 -1.2937 41 1 0.6199 0.1673 5.5899 42 1 2.3609 -0.1449 5.3045 43 1 3.6447 4.9060 5.3701 44 1 4.3658 6.7580 6.8201 45 1 2.1868 2.7916 8.7874 46 1 4.9139 5.4984 11.0752 47 1 3.5698 6.5282 11.6636 48 1 3.5226 2.5324 4.3495 49 1 2.1459 3.6742 4.3217 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000072310790.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:22:58 Heat of formation + Delta-G solvation = -148.623100 kcal Electronic energy + Delta-G solvation = -34474.271029 eV Core-core repulsion = 29753.945289 eV Total energy + Delta-G solvation = -4720.325739 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 375.161 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -42.43642 -41.37839 -39.77814 -37.98084 -36.97589 -36.52298 -35.96702 -34.16846 -33.10257 -32.25054 -30.80686 -29.22316 -28.07082 -27.46739 -26.19255 -26.06734 -24.69941 -23.53825 -23.08976 -22.32856 -20.51360 -20.18078 -18.87620 -18.42726 -18.17086 -17.68561 -17.52948 -17.13523 -16.70378 -16.15943 -16.00594 -15.63023 -15.46907 -15.01627 -14.71377 -14.52506 -14.26872 -14.13448 -13.92468 -13.83194 -13.78670 -13.26116 -13.24018 -13.09890 -13.01877 -12.82715 -12.66407 -12.23554 -11.81664 -11.76633 -11.68366 -11.52877 -11.46557 -11.28791 -11.15821 -11.05822 -10.78185 -10.33527 -10.27097 -10.04884 -10.00322 -9.81936 -9.66265 -9.43016 -8.96390 -8.87694 -8.53604 -7.91937 -6.27543 -4.32115 0.75533 0.92697 2.14110 2.29221 2.63477 2.70487 3.17618 3.18497 3.22581 3.27929 3.34333 3.38283 3.94895 4.13422 4.24313 4.26758 4.36085 4.54222 4.59585 4.68903 4.74607 4.78871 4.97426 5.06411 5.13262 5.24715 5.32491 5.40740 5.48646 5.59825 5.70440 5.73515 5.82249 5.91204 5.96210 5.99347 6.05687 6.12539 6.38120 6.40045 6.59564 6.70084 6.71138 6.85895 6.87106 6.88991 7.15168 7.29529 7.50783 7.54542 7.72631 7.77024 8.02874 8.44683 8.78569 9.32410 10.80952 Molecular weight = 375.16amu Principal moments of inertia in cm(-1) A = 0.019980 B = 0.001894 C = 0.001801 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1401.030987 B =14782.753409 C =15546.176067 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 C -0.107 4.107 3 C -0.139 4.139 4 C 0.226 3.774 5 H 0.053 0.947 6 C -0.519 4.519 7 H 0.069 0.931 8 C 0.066 3.934 9 N -0.885 5.885 10 Si 0.905 3.095 11 H -0.270 1.270 12 H -0.281 1.281 13 H -0.282 1.282 14 O -0.345 6.345 15 C 0.464 3.536 16 O -0.508 6.508 17 C -0.098 4.098 18 H 0.127 0.873 19 C -0.137 4.137 20 C 0.522 3.478 21 O -0.505 6.505 22 N -0.557 5.557 23 C 0.186 3.814 24 C -0.148 4.148 25 C -0.069 4.069 26 C 0.000 4.000 27 C 0.063 3.937 28 C -0.142 4.142 29 O -0.307 6.307 30 C 0.213 3.787 31 O -0.310 6.310 32 C 0.108 3.892 33 H 0.028 0.972 34 H 0.039 0.961 35 H 0.061 0.939 36 H 0.100 0.900 37 H 0.032 0.968 38 H 0.056 0.944 39 H 0.034 0.966 40 H 0.266 0.734 41 H 0.124 0.876 42 H 0.120 0.880 43 H 0.145 0.855 44 H 0.141 0.859 45 H 0.168 0.832 46 H 0.083 0.917 47 H 0.131 0.869 48 H 0.107 0.893 49 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.355 16.028 14.271 21.464 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C -0.126 4.126 3 C -0.197 4.197 4 C 0.174 3.826 5 H 0.071 0.929 6 C -0.557 4.557 7 H 0.088 0.912 8 C -0.137 4.137 9 N -0.522 5.522 10 Si 0.732 3.268 11 H -0.194 1.194 12 H -0.207 1.207 13 H -0.208 1.208 14 O -0.260 6.260 15 C 0.306 3.694 16 O -0.398 6.398 17 C -0.118 4.118 18 H 0.145 0.855 19 C -0.177 4.177 20 C 0.312 3.688 21 O -0.380 6.380 22 N -0.280 5.280 23 C 0.091 3.909 24 C -0.168 4.168 25 C -0.088 4.088 26 C -0.045 4.045 27 C 0.017 3.983 28 C -0.162 4.162 29 O -0.223 6.223 30 C 0.101 3.899 31 O -0.227 6.227 32 C -0.014 4.014 33 H 0.048 0.952 34 H 0.058 0.942 35 H 0.080 0.920 36 H 0.118 0.882 37 H 0.051 0.949 38 H 0.075 0.925 39 H 0.053 0.947 40 H 0.076 0.924 41 H 0.142 0.858 42 H 0.138 0.862 43 H 0.162 0.838 44 H 0.159 0.841 45 H 0.185 0.815 46 H 0.101 0.899 47 H 0.148 0.852 48 H 0.125 0.875 49 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -0.101 15.975 14.721 21.724 hybrid contribution -0.025 -0.741 -0.177 0.762 sum -0.127 15.235 14.544 21.063 Atomic orbital electron populations 1.21610 0.96500 1.01630 0.98676 1.21550 0.95063 0.93984 1.01953 1.21925 1.01299 0.97507 0.98926 1.20750 0.94796 0.90891 0.76152 0.92916 1.20964 1.27701 0.91861 1.15148 0.91238 1.24869 0.94410 0.99002 0.95455 1.69954 1.25988 1.36898 1.19406 0.86317 0.78794 0.83447 0.78228 1.19408 1.20701 1.20825 1.86473 1.51685 1.43178 1.44667 1.22496 0.83030 0.79831 0.84092 1.90637 1.23297 1.63135 1.62730 1.21841 1.02025 0.95464 0.92485 0.85498 1.22316 1.07075 0.97898 0.90447 1.21114 0.75783 0.81655 0.90229 1.90638 1.52973 1.75693 1.18686 1.45831 1.60048 1.14483 1.07687 1.17194 0.96942 0.88075 0.88692 1.20595 1.02743 0.92870 1.00630 1.19791 1.00920 0.99761 0.88310 1.19758 1.04052 0.89423 0.91293 1.19449 1.00245 0.95388 0.83169 1.20308 1.05790 0.99494 0.90626 1.87382 1.60008 1.55349 1.19523 1.25621 0.93252 0.82440 0.88543 1.87363 1.87516 1.32952 1.14846 1.22274 1.02711 0.99667 0.76742 0.95241 0.94204 0.91978 0.88175 0.94854 0.92500 0.94651 0.92407 0.85789 0.86169 0.83753 0.84139 0.81505 0.89904 0.85196 0.87530 0.88437 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.46 8.81 37.16 0.33 -2.14 16 2 C -0.11 -2.32 2.65 -90.62 -0.24 -2.56 16 3 C -0.14 -2.68 7.77 37.16 0.29 -2.39 16 4 C 0.23 5.32 1.80 -27.88 -0.05 5.27 16 5 H 0.05 1.41 7.13 -51.93 -0.37 1.04 16 6 C -0.52 -13.20 7.84 -34.44 -0.27 -13.47 16 7 H 0.07 1.76 7.82 -52.49 -0.41 1.35 16 8 C 0.07 1.68 5.23 -17.82 -0.09 1.59 16 9 N -0.89 -23.71 11.96 55.43 0.66 -23.04 16 10 Si 0.91 20.01 29.54 -169.99 -5.02 14.98 16 11 H -0.27 -5.87 7.11 56.52 0.40 -5.47 16 12 H -0.28 -6.17 7.11 56.52 0.40 -5.77 16 13 H -0.28 -6.26 7.11 56.52 0.40 -5.86 16 14 O -0.34 -6.87 8.92 -39.27 -0.35 -7.22 16 15 C 0.46 7.73 5.73 36.01 0.21 7.94 16 16 O -0.51 -9.61 12.55 -18.75 -0.24 -9.85 16 17 C -0.10 -1.13 3.66 -90.14 -0.33 -1.46 16 18 H 0.13 1.17 8.14 -51.93 -0.42 0.75 16 19 C -0.14 -1.57 6.41 -26.74 -0.17 -1.74 16 20 C 0.52 6.69 7.92 -10.86 -0.09 6.60 16 21 O -0.50 -7.81 14.82 5.55 0.08 -7.72 16 22 N -0.56 -6.35 3.14 -112.25 -0.35 -6.71 16 23 C 0.19 2.15 6.60 -83.65 -0.55 1.59 16 24 C -0.15 -1.39 9.40 -39.38 -0.37 -1.76 16 25 C -0.07 -0.64 10.05 -39.49 -0.40 -1.04 16 26 C 0.00 0.00 7.15 -39.08 -0.28 -0.28 16 27 C 0.06 0.77 7.15 -39.10 -0.28 0.49 16 28 C -0.14 -1.82 9.30 -39.28 -0.37 -2.19 16 29 O -0.31 -3.54 11.40 -45.75 -0.52 -4.06 16 30 C 0.21 1.67 8.89 101.05 0.90 2.57 16 31 O -0.31 -3.22 11.41 -46.02 -0.52 -3.75 16 32 C 0.11 1.09 5.62 -3.13 -0.02 1.08 16 33 H 0.03 0.50 8.14 -51.93 -0.42 0.08 16 34 H 0.04 0.72 7.54 -51.93 -0.39 0.32 16 35 H 0.06 1.28 7.40 -51.93 -0.38 0.90 16 36 H 0.10 2.47 6.62 -51.93 -0.34 2.12 16 37 H 0.03 0.59 6.50 -51.93 -0.34 0.25 16 38 H 0.06 1.17 7.52 -51.93 -0.39 0.78 16 39 H 0.03 0.61 8.14 -51.93 -0.42 0.19 16 40 H 0.27 6.77 8.31 -40.82 -0.34 6.43 16 41 H 0.12 1.24 8.14 -51.93 -0.42 0.82 16 42 H 0.12 1.46 7.89 -51.93 -0.41 1.05 16 43 H 0.14 1.04 7.01 -52.49 -0.37 0.67 16 44 H 0.14 0.97 8.06 -52.49 -0.42 0.55 16 45 H 0.17 2.41 5.25 -52.49 -0.28 2.13 16 46 H 0.08 0.49 8.14 -51.93 -0.42 0.07 16 47 H 0.13 0.59 8.14 -51.93 -0.42 0.16 16 48 H 0.11 1.19 6.96 -51.93 -0.36 0.83 16 49 H 0.10 0.76 7.71 -51.93 -0.40 0.36 16 LS Contribution 397.59 15.07 5.99 5.99 Total: -1.00 -30.92 397.59 -8.59 -39.51 By element: Atomic # 1 Polarization: 10.29 SS G_CDS: -6.54 Total: 3.75 kcal Atomic # 6 Polarization: -0.11 SS G_CDS: -1.78 Total: -1.89 kcal Atomic # 7 Polarization: -30.06 SS G_CDS: 0.31 Total: -29.75 kcal Atomic # 8 Polarization: -31.05 SS G_CDS: -1.55 Total: -32.60 kcal Atomic # 14 Polarization: 20.01 SS G_CDS: -5.02 Total: 14.98 kcal Total LS contribution 5.99 Total: 5.99 kcal Total: -30.92 -8.59 -39.51 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000072310790.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.118 kcal (2) G-P(sol) polarization free energy of solvation -30.918 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.036 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.587 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.505 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.623 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds