Wall clock time and date at job start Tue Mar 31 2020 05:21:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.35314 * 126.12930 * 2 1 4 4 C 1.39875 * 107.92126 * 180.14346 * 3 2 1 5 5 C 1.50697 * 125.90016 * 179.86401 * 4 3 2 6 6 H 1.09000 * 109.50292 * 154.79897 * 5 4 3 7 7 C 1.53113 * 109.50391 * 34.71677 * 5 4 3 8 8 C 1.53125 * 109.16391 * 182.40604 * 7 5 4 9 9 C 1.53039 * 109.27667 * 57.65183 * 8 7 5 10 10 N 1.46843 * 109.52633 * 300.82500 * 9 8 7 11 11 C 1.46897 * 111.00444 * 185.83800 * 10 9 8 12 12 C 1.50699 * 109.46835 * 66.04536 * 11 10 9 13 13 C 1.38118 * 120.02593 * 260.00043 * 12 11 10 14 14 C 1.38389 * 120.05206 * 179.97438 * 13 12 11 15 15 Cl 1.73599 * 119.94133 * 179.97438 * 14 13 12 16 16 C 1.38432 * 120.11661 * 359.95859 * 14 13 12 17 17 C 1.38065 * 120.05097 * 0.27860 * 16 14 13 18 18 C 1.38851 * 120.03021 * 79.97997 * 12 11 10 19 19 O 1.35763 * 120.05694 * 0.02562 * 18 12 11 20 20 C 1.34817 * 117.00367 * 174.16553 * 19 18 12 21 21 H 1.08002 * 120.00324 * 5.07257 * 20 19 18 22 22 C 1.38648 * 120.00290 * 185.06288 * 20 19 18 23 23 N 1.31558 * 120.00081 * 0.02562 * 22 20 19 24 24 Si 1.86798 * 120.00194 * 180.02562 * 22 20 19 25 25 H 1.48496 * 109.47193 * 359.97438 * 24 22 20 26 26 H 1.48501 * 109.47324 * 120.00257 * 24 22 20 27 27 H 1.48508 * 109.47181 * 240.00157 * 24 22 20 28 28 C 1.46855 * 111.19894 * 61.73867 * 10 9 8 29 29 N 1.30839 * 108.19887 * 359.60302 * 4 3 2 30 30 N 1.34949 * 126.12333 * 179.70165 * 2 1 3 31 31 H 0.97003 * 126.04214 * 0.02562 * 30 2 1 32 32 H 1.09005 * 109.46982 * 270.26816 * 1 2 3 33 33 H 1.08995 * 109.46777 * 30.26811 * 1 2 3 34 34 H 1.08995 * 109.47087 * 150.26907 * 1 2 3 35 35 H 1.07993 * 126.04194 * 0.02580 * 3 2 1 36 36 H 1.08997 * 109.52594 * 62.49787 * 7 5 4 37 37 H 1.09006 * 109.52618 * 302.31016 * 7 5 4 38 38 H 1.09000 * 109.50130 * 297.71710 * 8 7 5 39 39 H 1.08994 * 109.50640 * 177.59674 * 8 7 5 40 40 H 1.08999 * 109.46307 * 180.80535 * 9 8 7 41 41 H 1.09006 * 109.46248 * 60.83875 * 9 8 7 42 42 H 1.08997 * 109.46898 * 306.04995 * 11 10 9 43 43 H 1.08995 * 109.47647 * 186.04306 * 11 10 9 44 44 H 1.07997 * 119.97589 * 359.97438 * 13 12 11 45 45 H 1.08001 * 119.97725 * 179.97438 * 16 14 13 46 46 H 1.08006 * 120.02686 * 179.72058 * 17 16 14 47 47 H 0.96996 * 120.00510 * 179.97438 * 23 22 20 48 48 H 1.08998 * 109.45952 * 58.27794 * 28 10 9 49 49 H 1.08994 * 109.46223 * 178.24200 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3048 1.0929 0.0000 4 6 3.6336 0.6558 -0.0033 5 6 4.8544 1.5393 -0.0074 6 1 5.6954 0.9999 0.4282 7 6 4.5753 2.8007 0.8144 8 6 5.7985 3.7199 0.7554 9 6 6.1087 4.0552 -0.7052 10 7 6.3690 2.8159 -1.4487 11 6 6.8055 3.1068 -2.8208 12 6 8.1469 3.7927 -2.7863 13 6 8.2256 5.1644 -2.9266 14 6 9.4571 5.7949 -2.8945 15 17 9.5527 7.5192 -3.0719 16 6 10.6129 5.0530 -2.7209 17 6 10.5399 3.6810 -2.5851 18 6 9.3048 3.0462 -2.6130 19 8 9.2302 1.6977 -2.4749 20 6 10.3956 1.0213 -2.4317 21 1 11.3321 1.5591 -2.4233 22 6 10.3920 -0.3648 -2.3979 23 7 9.2512 -1.0200 -2.4085 24 14 12.0067 -1.3018 -2.3374 25 1 13.1377 -0.3395 -2.3351 26 1 12.0549 -2.1259 -1.1029 27 1 12.1114 -2.1851 -3.5266 28 6 5.1918 1.9378 -1.4459 29 7 3.6334 -0.6525 0.0033 30 7 2.3026 -1.0900 0.0057 31 1 2.0055 -2.0134 0.0101 32 1 -0.3633 0.0048 1.0277 33 1 -0.3633 0.8875 -0.5180 34 1 -0.3633 -0.8923 -0.5096 35 1 1.9742 2.1210 0.0004 36 1 4.3769 2.5244 1.8499 37 1 3.7096 3.3197 0.4026 38 1 6.6549 3.2151 1.2026 39 1 5.5901 4.6388 1.3034 40 1 6.9877 4.6980 -0.7516 41 1 5.2572 4.5722 -1.1479 42 1 6.0768 3.7580 -3.3035 43 1 6.8879 2.1755 -3.3810 44 1 7.3253 5.7456 -3.0615 45 1 11.5728 5.5473 -2.6966 46 1 11.4423 3.1021 -2.4542 47 1 9.2486 -1.9897 -2.3853 48 1 4.3447 2.4647 -1.8851 49 1 5.4051 1.0428 -2.0302 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000076059690.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:21:31 Heat of formation + Delta-G solvation = 57.746967 kcal Electronic energy + Delta-G solvation = -31995.267535 eV Core-core repulsion = 27756.892589 eV Total energy + Delta-G solvation = -4238.374946 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 375.145 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.28501 -39.47323 -38.34051 -36.73312 -35.54479 -34.18288 -32.64415 -32.27717 -31.46419 -30.62555 -29.32406 -28.74188 -27.12910 -25.80597 -25.34430 -23.51939 -22.72521 -21.66229 -20.80636 -20.63827 -19.72073 -18.91967 -18.02138 -17.29179 -16.88766 -15.59198 -15.41386 -15.15088 -14.99099 -14.61210 -14.43883 -14.22944 -13.91845 -13.85600 -13.65675 -13.59955 -13.48954 -13.05659 -12.95775 -12.86837 -12.72026 -12.30838 -12.28668 -12.19035 -11.97195 -11.78124 -11.58650 -11.12588 -11.10919 -10.92153 -10.82506 -10.63337 -10.45358 -10.40550 -10.39298 -10.27482 -10.16501 -10.07938 -9.36412 -9.16568 -8.81397 -8.59556 -8.24887 -7.70817 -7.16552 -6.45735 -4.02723 1.87380 2.00865 2.16087 2.81166 2.86328 2.87363 3.12379 3.14379 3.19498 3.95463 4.19824 4.49644 4.58174 4.77269 4.88906 5.07091 5.10480 5.13314 5.17956 5.20124 5.31430 5.40084 5.51467 5.57069 5.59178 5.64831 5.66287 5.72377 5.76288 5.84751 5.88534 5.95153 6.02768 6.11389 6.15317 6.20711 6.25352 6.38770 6.43428 6.47957 6.49424 6.64043 6.71455 6.73009 6.93743 6.97488 7.19398 7.29290 7.31636 7.60667 7.63697 7.68043 7.79210 7.96668 8.98596 9.67516 10.70131 Molecular weight = 375.15amu Principal moments of inertia in cm(-1) A = 0.006806 B = 0.003179 C = 0.002276 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 4113.208260 B = 8806.068956 C =12301.188800 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 C 0.077 3.923 3 C -0.265 4.265 4 C 0.095 3.905 5 C -0.006 4.006 6 H 0.097 0.903 7 C -0.105 4.105 8 C -0.116 4.116 9 C 0.055 3.945 10 N -0.518 5.518 11 C 0.121 3.879 12 C -0.147 4.147 13 C -0.058 4.058 14 C -0.130 4.130 15 Cl -0.111 7.111 16 C -0.058 4.058 17 C -0.229 4.229 18 C 0.176 3.824 19 O -0.147 6.147 20 C -0.394 4.394 21 H 0.092 0.908 22 C 0.045 3.955 23 N -0.847 5.847 24 Si 0.937 3.063 25 H -0.267 1.267 26 H -0.276 1.276 27 H -0.276 1.276 28 C 0.077 3.923 29 N -0.282 5.282 30 N -0.480 5.480 31 H 0.434 0.566 32 H 0.078 0.922 33 H 0.084 0.916 34 H 0.068 0.932 35 H 0.144 0.856 36 H 0.062 0.938 37 H 0.061 0.939 38 H 0.073 0.927 39 H 0.064 0.936 40 H 0.079 0.921 41 H 0.024 0.976 42 H 0.029 0.971 43 H 0.087 0.913 44 H 0.117 0.883 45 H 0.115 0.885 46 H 0.134 0.866 47 H 0.270 0.730 48 H 0.027 0.973 49 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.944 5.818 4.133 15.664 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.052 4.052 3 C -0.295 4.295 4 C -0.073 4.073 5 C -0.026 4.026 6 H 0.115 0.885 7 C -0.144 4.144 8 C -0.153 4.153 9 C -0.073 4.073 10 N -0.242 5.242 11 C -0.006 4.006 12 C -0.149 4.149 13 C -0.077 4.077 14 C -0.157 4.157 15 Cl -0.082 7.082 16 C -0.077 4.077 17 C -0.249 4.249 18 C 0.119 3.881 19 O -0.048 6.048 20 C -0.470 4.470 21 H 0.109 0.891 22 C -0.161 4.161 23 N -0.480 5.480 24 Si 0.762 3.238 25 H -0.191 1.191 26 H -0.201 1.201 27 H -0.202 1.202 28 C -0.052 4.052 29 N -0.104 5.104 30 N -0.189 5.189 31 H 0.278 0.722 32 H 0.097 0.903 33 H 0.103 0.897 34 H 0.087 0.913 35 H 0.162 0.838 36 H 0.081 0.919 37 H 0.079 0.921 38 H 0.092 0.908 39 H 0.083 0.917 40 H 0.097 0.903 41 H 0.042 0.958 42 H 0.047 0.953 43 H 0.105 0.895 44 H 0.135 0.865 45 H 0.133 0.867 46 H 0.152 0.848 47 H 0.080 0.920 48 H 0.045 0.955 49 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -13.128 4.221 4.384 14.470 hybrid contribution -0.380 0.302 -0.381 0.617 sum -13.508 4.523 4.003 14.797 Atomic orbital electron populations 1.20425 0.87551 1.03763 1.03179 1.21082 0.94405 0.88010 1.01682 1.21108 0.91791 0.98907 1.17677 1.22297 0.95475 0.91314 0.98171 1.19569 0.92726 0.93430 0.96916 0.88461 1.21567 0.98125 0.95091 0.99571 1.21573 0.98300 0.99003 0.96464 1.22109 0.99767 0.91777 0.93682 1.61728 1.33037 1.14837 1.14635 1.20619 0.91658 0.99575 0.88725 1.18636 0.93439 0.91658 1.11151 1.20376 0.95506 0.92872 0.98974 1.20205 0.95126 0.82454 1.17920 1.98271 1.98753 1.14213 1.97011 1.20600 0.96303 0.93283 0.97521 1.21100 0.98519 0.93808 1.11447 1.19108 0.92162 0.85515 0.91275 1.84040 1.32831 1.12228 1.75722 1.21389 0.83792 0.89016 1.52796 0.89092 1.25253 0.98828 0.95645 0.96394 1.70054 1.25058 1.08368 1.44484 0.85708 0.80271 0.79561 0.78272 1.19087 1.20121 1.20190 1.21907 0.90723 0.97403 0.95156 1.77486 0.95498 1.12804 1.24598 1.46350 1.04302 1.08034 1.60183 0.72220 0.90350 0.89695 0.91266 0.83837 0.91937 0.92061 0.90781 0.91742 0.90296 0.95756 0.95332 0.89450 0.86498 0.86667 0.84803 0.92025 0.95486 0.90162 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.56 10.43 36.01 0.38 -0.18 16 2 C 0.08 0.81 7.21 -82.26 -0.59 0.22 16 3 C -0.27 -3.28 9.88 -40.01 -0.40 -3.68 16 4 C 0.10 1.44 6.14 -82.40 -0.51 0.93 16 5 C -0.01 -0.09 2.81 -91.70 -0.26 -0.35 16 6 H 0.10 1.77 8.14 -51.93 -0.42 1.35 16 7 C -0.11 -1.34 4.92 -26.61 -0.13 -1.47 16 8 C -0.12 -1.55 6.09 -26.65 -0.16 -1.71 16 9 C 0.05 0.83 5.26 -3.84 -0.02 0.81 16 10 N -0.52 -9.26 4.65 -236.12 -1.10 -10.36 16 11 C 0.12 2.24 4.76 -4.98 -0.02 2.22 16 12 C -0.15 -2.90 4.60 -104.44 -0.48 -3.38 16 13 C -0.06 -1.01 8.35 -39.57 -0.33 -1.34 16 14 C -0.13 -2.29 6.32 -39.45 -0.25 -2.54 16 15 Cl -0.11 -1.70 28.95 -51.86 -1.50 -3.20 16 16 C -0.06 -1.06 9.82 -39.57 -0.39 -1.45 16 17 C -0.23 -4.79 9.17 -39.40 -0.36 -5.15 16 18 C 0.18 4.01 6.62 -39.11 -0.26 3.75 16 19 O -0.15 -3.94 8.99 0.05 0.00 -3.93 16 20 C -0.39 -10.52 9.49 30.88 0.29 -10.23 16 21 H 0.09 2.27 5.20 -52.49 -0.27 1.99 16 22 C 0.04 1.19 5.49 -17.52 -0.10 1.10 16 23 N -0.85 -24.03 13.67 55.48 0.76 -23.27 16 24 Si 0.94 20.14 29.55 -169.99 -5.02 15.12 16 25 H -0.27 -5.50 7.11 56.52 0.40 -5.10 16 26 H -0.28 -5.87 7.11 56.52 0.40 -5.47 16 27 H -0.28 -5.85 7.11 56.52 0.40 -5.45 16 28 C 0.08 1.28 4.72 -3.83 -0.02 1.27 16 29 N -0.28 -4.61 12.70 33.67 0.43 -4.18 16 30 N -0.48 -5.78 7.36 33.48 0.25 -5.54 16 31 H 0.43 3.81 8.96 -182.60 -1.64 2.17 16 32 H 0.08 0.39 8.14 -51.93 -0.42 -0.03 16 33 H 0.08 0.45 8.14 -51.93 -0.42 0.02 16 34 H 0.07 0.33 8.14 -51.93 -0.42 -0.09 16 35 H 0.14 1.50 7.36 -52.49 -0.39 1.12 16 36 H 0.06 0.75 8.14 -51.93 -0.42 0.33 16 37 H 0.06 0.70 7.19 -51.93 -0.37 0.33 16 38 H 0.07 1.12 8.14 -51.93 -0.42 0.70 16 39 H 0.06 0.73 8.14 -51.93 -0.42 0.30 16 40 H 0.08 1.28 6.31 -51.93 -0.33 0.95 16 41 H 0.02 0.34 8.14 -51.93 -0.42 -0.09 16 42 H 0.03 0.46 7.98 -51.93 -0.41 0.05 16 43 H 0.09 1.83 7.70 -51.93 -0.40 1.43 16 44 H 0.12 1.81 8.04 -52.49 -0.42 1.39 16 45 H 0.12 1.85 8.06 -52.49 -0.42 1.42 16 46 H 0.13 2.79 5.64 -52.48 -0.30 2.50 16 47 H 0.27 7.11 8.31 -40.82 -0.34 6.77 16 48 H 0.03 0.41 8.14 -51.93 -0.42 -0.01 16 49 H 0.08 1.54 8.01 -51.93 -0.42 1.13 16 LS Contribution 411.31 15.07 6.20 6.20 Total: -1.00 -30.71 411.31 -11.90 -42.62 By element: Atomic # 1 Polarization: 16.03 SS G_CDS: -8.31 Total: 7.72 kcal Atomic # 6 Polarization: -17.57 SS G_CDS: -3.60 Total: -21.18 kcal Atomic # 7 Polarization: -43.68 SS G_CDS: 0.34 Total: -43.34 kcal Atomic # 8 Polarization: -3.94 SS G_CDS: 0.00 Total: -3.93 kcal Atomic # 14 Polarization: 20.14 SS G_CDS: -5.02 Total: 15.12 kcal Atomic # 17 Polarization: -1.70 SS G_CDS: -1.50 Total: -3.20 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -30.71 -11.90 -42.62 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000076059690.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.362 kcal (2) G-P(sol) polarization free energy of solvation -30.714 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.648 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.902 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.615 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.747 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds